RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 IGF1RP08069 1367 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 NACADO15069 1562 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 DYNC1I1O14576 645 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 CCDC172P0C7W6 258 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 RARAP10276 462 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 COL19A1Q14993 1142 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 MNS1Q8NEH6 495 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 BHMTQ93088 406 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 ITFG2Q969R8 447 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 ALKBH8Q96BT7 664 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 ASB16Q96NS5 453 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 CNTNAP3BQ96NU0 1288 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 FAM129BQ96TA1 746 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 CNTNAP3Q9BZ76 1288 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 BRMS1Q9HCU9 246 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 RIPOR2Q9Y4F9 1068 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 RB1CC1Q8TDY2 1594 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 NINLQ9Y2I6 1382 aa5.93□□□□□ -1.46
ECHDC1-221ENST00000531582 PSAPP07602 524 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 SLURP2P0DP57 97 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 ALAS2P22557 587 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 SOX18P35713 384 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 GMPRP36959 345 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 ITGAEP38570 1179 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 RBM25P49756 843 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 SYT9Q86SS6 491 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 FAM9BQ8IZU0 186 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 DCAF11Q8TEB1 546 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 SNRNP27Q8WVK2 155 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 TNFRSF25Q93038 417 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 SLC30A3Q99726 388 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 OXCT2Q9BYC2 517 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 ELP3Q9H9T3 547 aa5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 ABI2Q9NYB9 513 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-221ENST00000531582 ADARB2-AS1A8MUL3 147 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 C2CD2LO14523 706 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 WIPF1O43516 503 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 SASH3O75995 380 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 ADAMTS2O95450 1211 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 NFKB1P19838 968 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 GRNP28799 593 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 MFAP1P55081 439 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 PLAURQ03405 335 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 NFKBIBQ15653 356 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 RNFT1Q5M7Z0 435 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 CREBRFQ8IUR6 639 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 SNX29Q8TEQ0 813 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 NCAPGQ9BPX3 1015 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 DNAJC25Q9H1X3 360 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 GGNBP2Q9H3C7 697 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 MYH16Q9H6N6 1097 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 ENAMQ9NRM1 1142 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 TLR7Q9NYK1 1049 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 RAD50Q92878 1312 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 KIF16BQ96L93 1317 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 CADPSQ9ULU8 1353 aa5.91□□□□□ -1.46
ECHDC1-221ENST00000531582 PHF20L1A8MW92 1017 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 E9PSI1 815 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 CCER2I3L3R5 266 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 ZRANB2O95218 330 aaKnown RBP eCLIP5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 HOXD8P13378 290 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 TARSP26639 723 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 NRLP54845 237 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 PLCB3Q01970 1234 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 TRIP4Q15650 581 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 UVSSAQ2YD98 709 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 SLCO4C1Q6ZQN7 724 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 DHX32Q7L7V1 743 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 NGEFQ8N5V2 710 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 SGSM3Q96HU1 749 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 RBSNQ9H1K0 784 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 USP20Q9Y2K6 914 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 KNSTRNQ9Y448 316 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 KIF3AQ9Y496 699 aa5.9□□□□□ -1.46
ECHDC1-221ENST00000531582 TULP2O00295 520 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 PHACTR2O75167 634 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 TNFRSF21O75509 655 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 BCRP11274 1271 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 LIG1P18858 919 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 MAP3K10Q02779 954 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 KRT25Q7Z3Z0 450 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 TMC7Q7Z402 723 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 OR13H1Q8NG92 308 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 TRPM4Q8TD43 1214 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 SPACA7Q96KW9 195 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 UBE2OQ9C0C9 1292 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 SMC4Q9NTJ3 1288 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 DONSONQ9NYP3 566 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 HCN2Q9UL51 889 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 ZBED9Q6R2W3 1325 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 PHLDB1Q86UU1 1377 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 NCAPD3P42695 1498 aa5.89□□□□□ -1.47
ECHDC1-221ENST00000531582 ELOA3CA0A087WX78 387 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-221ENST00000531582 ELOA3DA6NLF2 546 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-221ENST00000531582 TREHO43280 583 aa5.88□□□□□ -1.47
ECHDC1-221ENST00000531582 CPNE3O75131 537 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-221ENST00000531582 OFD1O75665 1012 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms