RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.09□□□□□ -0.79
PTPRK-220ENST00000531466 KIAA1324LA8MWY0 1029 aaPredicted RBP10.09□□□□□ -0.79
PTPRK-220ENST00000531466 NFIAQ12857 509 aa10.09□□□□□ -0.79
PTPRK-220ENST00000531466 ZDHHC13Q8IUH4 622 aa10.09□□□□□ -0.79
PTPRK-220ENST00000531466 FAM46AQ96IP4 442 aaKnown RBP10.09□□□□□ -0.79
PTPRK-220ENST00000531466 HMX2A2RU54 273 aa10.08□□□□□ -0.8
PTPRK-220ENST00000531466 ADAM11O75078 769 aa10.08□□□□□ -0.8
PTPRK-220ENST00000531466 PTPRAP18433 802 aa10.08□□□□□ -0.8
PTPRK-220ENST00000531466 IRAK1P51617 712 aa10.08□□□□□ -0.8
PTPRK-220ENST00000531466 UVSSAQ2YD98 709 aa10.08□□□□□ -0.8
PTPRK-220ENST00000531466 TMEM164Q5U3C3 297 aa10.08□□□□□ -0.8
PTPRK-220ENST00000531466 KLHL23Q8NBE8 558 aa10.08□□□□□ -0.8
PTPRK-220ENST00000531466 OAS3Q9Y6K5 1087 aaKnown RBP10.08□□□□□ -0.8
PTPRK-220ENST00000531466 CEP120Q8N960 986 aa10.07□□□□□ -0.8
PTPRK-220ENST00000531466 KLHDC7BQ96G42 594 aa10.07□□□□□ -0.8
PTPRK-220ENST00000531466 POP1Q99575 1024 aaKnown RBP10.07□□□□□ -0.8
PTPRK-220ENST00000531466 TMEM63CQ9P1W3 806 aa10.07□□□□□ -0.8
PTPRK-220ENST00000531466 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
PTPRK-220ENST00000531466 FAM177BA6PVY3 158 aa10.06□□□□□ -0.8
PTPRK-220ENST00000531466 PAX4O43316 350 aa10.06□□□□□ -0.8
PTPRK-220ENST00000531466 GP2P55259 537 aaKnown RBP10.06□□□□□ -0.8
PTPRK-220ENST00000531466 MYRFLQ96LU7 910 aa10.06□□□□□ -0.8
PTPRK-220ENST00000531466 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
PTPRK-220ENST00000531466 SEC31BQ9NQW1 1179 aa10.06□□□□□ -0.8
PTPRK-220ENST00000531466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.06□□□□□ -0.8
PTPRK-220ENST00000531466 ADAMTS4O75173 837 aa10.05□□□□□ -0.8
PTPRK-220ENST00000531466 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
PTPRK-220ENST00000531466 RNF43Q68DV7 783 aa10.05□□□□□ -0.8
PTPRK-220ENST00000531466 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
PTPRK-220ENST00000531466 ACPPP15309 386 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 ZNF438Q7Z4V0 828 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 ATCAYQ86WG3 371 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 NUDT16Q96DE0 195 aaKnown RBP10.04□□□□□ -0.8
PTPRK-220ENST00000531466 DBNDD2Q9BQY9 259 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 KRTAP9-9Q9BYP9 154 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 KRTAP9-4Q9BYQ2 154 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 ADAM19Q9H013 955 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 CNTN3Q9P232 1028 aa10.04□□□□□ -0.8
PTPRK-220ENST00000531466 H3BRJ5 948 aa10.03□□□□□ -0.8
PTPRK-220ENST00000531466 SART1O43290 800 aaKnown RBP10.03□□□□□ -0.8
PTPRK-220ENST00000531466 ATG7O95352 703 aa10.03□□□□□ -0.8
PTPRK-220ENST00000531466 FAM20CQ8IXL6 584 aa10.03□□□□□ -0.8
PTPRK-220ENST00000531466 PRR19A6NJB7 356 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 BTBD11A6QL63 1104 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 SPINK2P20155 84 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 GRIK1P39086 918 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 PREPP48147 710 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 NLRP12P59046 1061 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 PDE12Q6L8Q7 609 aaKnown RBP10.02□□□□□ -0.81
PTPRK-220ENST00000531466 CLP1Q92989 425 aaKnown RBP10.02□□□□□ -0.81
PTPRK-220ENST00000531466 KCNF1Q9H3M0 494 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 SLAIN2Q9P270 581 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 SEPT3Q9UH03 358 aa10.02□□□□□ -0.81
PTPRK-220ENST00000531466 BMP3P12645 472 aa10.01□□□□□ -0.81
PTPRK-220ENST00000531466 TAL1P17542 331 aaPredicted RBP10.01□□□□□ -0.81
PTPRK-220ENST00000531466 CABP4P57796 275 aa10.01□□□□□ -0.81
PTPRK-220ENST00000531466 INTS5Q6P9B9 1019 aaKnown RBP10.01□□□□□ -0.81
PTPRK-220ENST00000531466 ZMYND15Q9H091 742 aa10.01□□□□□ -0.81
PTPRK-220ENST00000531466 PIP4K2BP78356 416 aa10□□□□□ -0.81
PTPRK-220ENST00000531466 ANKRD34AQ69YU3 496 aa10□□□□□ -0.81
PTPRK-220ENST00000531466 PPP1R3FQ6ZSY5 799 aaPredicted RBP10□□□□□ -0.81
PTPRK-220ENST00000531466 BEND4Q6ZU67 534 aa10□□□□□ -0.81
PTPRK-220ENST00000531466 CLEC10AQ8IUN9 316 aa10□□□□□ -0.81
PTPRK-220ENST00000531466 SHKBP1Q8TBC3 707 aa10□□□□□ -0.81
PTPRK-220ENST00000531466 SLC7A3Q8WY07 619 aa10□□□□□ -0.81
PTPRK-220ENST00000531466 FAM83CQ9BQN1 747 aa10□□□□□ -0.81
PTPRK-220ENST00000531466 TRPA1O75762 1119 aa9.99□□□□□ -0.81
PTPRK-220ENST00000531466 C1orf127Q8N9H9 656 aa9.99□□□□□ -0.81
PTPRK-220ENST00000531466 EDEM1Q92611 657 aa9.99□□□□□ -0.81
PTPRK-220ENST00000531466 HHIPQ96QV1 700 aa9.99□□□□□ -0.81
PTPRK-220ENST00000531466 RUSC1Q9BVN2 902 aa9.99□□□□□ -0.81
PTPRK-220ENST00000531466 SALL4Q9UJQ4 1053 aa9.99□□□□□ -0.81
PTPRK-220ENST00000531466 CES1P23141 567 aa9.98□□□□□ -0.81
PTPRK-220ENST00000531466 TXKP42681 527 aa9.98□□□□□ -0.81
PTPRK-220ENST00000531466 WNT8BQ93098 351 aa9.98□□□□□ -0.81
PTPRK-220ENST00000531466 RNF208Q9H0X6 261 aa9.98□□□□□ -0.81
PTPRK-220ENST00000531466 A6NHS1 94 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 NFKBIEO00221 500 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 PDE2AO00408 941 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-220ENST00000531466 ATP2B4P23634 1241 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 HGSNATQ68CP4 663 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 FDX2Q6P4F2 183 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 DTX1Q86Y01 620 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 FMNL2Q96PY5 1086 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 OSGEPQ9NPF4 335 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 DZANK1Q9NVP4 752 aa9.97□□□□□ -0.81
PTPRK-220ENST00000531466 WDR64B1ANS9 1081 aa9.96□□□□□ -0.82
PTPRK-220ENST00000531466 DNM1Q05193 864 aaKnown RBP9.96□□□□□ -0.82
PTPRK-220ENST00000531466 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
PTPRK-220ENST00000531466 GAS2O43903 313 aaKnown RBP9.94□□□□□ -0.82
PTPRK-220ENST00000531466 C8orf34Q49A92 452 aa9.94□□□□□ -0.82
PTPRK-220ENST00000531466 MFSD14AQ96MC6 490 aa9.94□□□□□ -0.82
PTPRK-220ENST00000531466 SOX13Q9UN79 622 aa9.94□□□□□ -0.82
PTPRK-220ENST00000531466 WNT11O96014 354 aa9.93□□□□□ -0.82
PTPRK-220ENST00000531466 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
PTPRK-220ENST00000531466 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
PTPRK-220ENST00000531466 C19orf57Q0VDD7 668 aa9.93□□□□□ -0.82
PTPRK-220ENST00000531466 SGO2Q562F6 1265 aa9.93□□□□□ -0.82
PTPRK-220ENST00000531466 XKR5Q6UX68 686 aa9.93□□□□□ -0.82
PTPRK-220ENST00000531466 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms