RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
CHEK1-211ENST00000531062 NLRP2Q9NX02 1062 aa9.34□□□□□ -0.91
CHEK1-211ENST00000531062 ACPPP15309 386 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 ERCC3P19447 782 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 COL8A1P27658 744 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 BAG6P46379 1132 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 MFAP1P55081 439 aaKnown RBP9.33□□□□□ -0.92
CHEK1-211ENST00000531062 WFDC8Q8IUA0 241 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 CCDC74AQ96AQ1 378 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 PLVAPQ9BX97 442 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 NPHS2Q9NP85 383 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 TRIM33Q9UPN9 1127 aa9.33□□□□□ -0.92
CHEK1-211ENST00000531062 PDE2AO00408 941 aaPredicted RBP9.32□□□□□ -0.92
CHEK1-211ENST00000531062 TRPA1O75762 1119 aa9.32□□□□□ -0.92
CHEK1-211ENST00000531062 IRS1P35568 1242 aa9.32□□□□□ -0.92
CHEK1-211ENST00000531062 EAPPQ56P03 285 aaPredicted RBP9.32□□□□□ -0.92
CHEK1-211ENST00000531062 ALYREFQ86V81 257 aaKnown RBP9.32□□□□□ -0.92
CHEK1-211ENST00000531062 IL22RA1Q8N6P7 574 aa9.32□□□□□ -0.92
CHEK1-211ENST00000531062 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
CHEK1-211ENST00000531062 EHD4Q9H223 541 aa9.32□□□□□ -0.92
CHEK1-211ENST00000531062 LATS2Q9NRM7 1088 aa9.32□□□□□ -0.92
CHEK1-211ENST00000531062 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
CHEK1-211ENST00000531062 PTPRAP18433 802 aa9.31□□□□□ -0.92
CHEK1-211ENST00000531062 FMR1Q06787 632 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHEK1-211ENST00000531062 ENOX2Q16206 610 aaKnown RBP9.31□□□□□ -0.92
CHEK1-211ENST00000531062 MSL1Q68DK7 614 aa9.31□□□□□ -0.92
CHEK1-211ENST00000531062 DNAJC14Q6Y2X3 702 aaPredicted RBP9.31□□□□□ -0.92
CHEK1-211ENST00000531062 ASAP3Q8TDY4 903 aa9.31□□□□□ -0.92
CHEK1-211ENST00000531062 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
CHEK1-211ENST00000531062 LDHBP07195 334 aaKnown RBP9.3□□□□□ -0.92
CHEK1-211ENST00000531062 P4HBP07237 508 aaKnown RBP9.3□□□□□ -0.92
CHEK1-211ENST00000531062 FGD1P98174 961 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 RASSF7Q02833 373 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 ALG1LQ6GMV1 187 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 ADAMTSL4Q6UY14 1074 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 DMRTC2Q8IXT2 367 aaPredicted RBP9.3□□□□□ -0.92
CHEK1-211ENST00000531062 TMEM102Q8N9M5 508 aaPredicted RBP9.3□□□□□ -0.92
CHEK1-211ENST00000531062 NXPE3Q969Y0 559 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 ADAM19Q9H013 955 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 LIN7BQ9HAP6 207 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 PPP4R2Q9NY27 417 aa9.3□□□□□ -0.92
CHEK1-211ENST00000531062 A0A1W2PP55 124 aa9.29□□□□□ -0.92
CHEK1-211ENST00000531062 CDC27P30260 824 aa9.29□□□□□ -0.92
CHEK1-211ENST00000531062 CABP4P57796 275 aa9.29□□□□□ -0.92
CHEK1-211ENST00000531062 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
CHEK1-211ENST00000531062 KIAA0319Q5VV43 1072 aa9.29□□□□□ -0.92
CHEK1-211ENST00000531062 DTWD1Q8N5C7 304 aa9.29□□□□□ -0.92
CHEK1-211ENST00000531062 EPS8L3Q8TE67 593 aaKnown RBP9.29□□□□□ -0.92
CHEK1-211ENST00000531062 BHLHE41Q9C0J9 482 aaPredicted RBP9.29□□□□□ -0.92
CHEK1-211ENST00000531062 CDC25BP30305 580 aa9.28□□□□□ -0.92
CHEK1-211ENST00000531062 RAC1P63000 192 aa9.28□□□□□ -0.92
CHEK1-211ENST00000531062 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
CHEK1-211ENST00000531062 PRRT3Q5FWE3 981 aa9.28□□□□□ -0.92
CHEK1-211ENST00000531062 FAM117BQ6P1L5 589 aa9.28□□□□□ -0.92
CHEK1-211ENST00000531062 HHIPQ96QV1 700 aa9.28□□□□□ -0.92
CHEK1-211ENST00000531062 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHEK1-211ENST00000531062 FBF1Q8TES7 1133 aa9.27□□□□□ -0.93
CHEK1-211ENST00000531062 DCAF5Q96JK2 942 aa9.27□□□□□ -0.93
CHEK1-211ENST00000531062 MUC3BQ9H195 1237 aa9.27□□□□□ -0.93
CHEK1-211ENST00000531062 WWC3Q9ULE0 1092 aa9.27□□□□□ -0.93
CHEK1-211ENST00000531062 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
CHEK1-211ENST00000531062 CCDC9Q9Y3X0 531 aaKnown RBP9.27□□□□□ -0.93
CHEK1-211ENST00000531062 PPME1Q9Y570 386 aa9.27□□□□□ -0.93
CHEK1-211ENST00000531062 A0A0A0MRY4 1105 aa9.26□□□□□ -0.93
CHEK1-211ENST00000531062 NPAS4Q8IUM7 802 aa9.26□□□□□ -0.93
CHEK1-211ENST00000531062 CCNJLQ8IV13 435 aa9.26□□□□□ -0.93
CHEK1-211ENST00000531062 PI16Q6UXB8 463 aa9.25□□□□□ -0.93
CHEK1-211ENST00000531062 BSNDQ8WZ55 320 aa9.25□□□□□ -0.93
CHEK1-211ENST00000531062 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
CHEK1-211ENST00000531062 TCF12Q99081 682 aa9.25□□□□□ -0.93
CHEK1-211ENST00000531062 SH2B1Q9NRF2 756 aaPredicted RBP9.25□□□□□ -0.93
CHEK1-211ENST00000531062 SPG7Q9UQ90 795 aa9.25□□□□□ -0.93
CHEK1-211ENST00000531062 LINC01387J3KSC0 135 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 TM4SF5O14894 197 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 PRPF40AO75400 957 aaKnown RBP9.24□□□□□ -0.93
CHEK1-211ENST00000531062 SPATA31C1P0DKV0 1188 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 FBXO11Q86XK2 927 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 FMR1NBQ8N0W7 255 aaPredicted RBP9.24□□□□□ -0.93
CHEK1-211ENST00000531062 TMEM151AQ8N4L1 468 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 BCL2L13Q9BXK5 485 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 BCL11AQ9H165 835 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 SRA1Q9HD15 236 aaKnown RBP9.24□□□□□ -0.93
CHEK1-211ENST00000531062 SOX13Q9UN79 622 aa9.24□□□□□ -0.93
CHEK1-211ENST00000531062 KRBA1A5PL33 1030 aa9.23□□□□□ -0.93
CHEK1-211ENST00000531062 METTL12A8MUP2 240 aa9.23□□□□□ -0.93
CHEK1-211ENST00000531062 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
CHEK1-211ENST00000531062 DEAF1O75398 565 aaPredicted RBP9.23□□□□□ -0.93
CHEK1-211ENST00000531062 GDF11O95390 407 aa9.23□□□□□ -0.93
CHEK1-211ENST00000531062 XPCQ01831 940 aaPredicted RBP9.23□□□□□ -0.93
CHEK1-211ENST00000531062 TXNDC11Q6PKC3 985 aa9.23□□□□□ -0.93
CHEK1-211ENST00000531062 PODXL2Q9NZ53 605 aa9.23□□□□□ -0.93
CHEK1-211ENST00000531062 A0A096LPE4 126 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 A0A1W2PPZ6 126 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 ELNP15502 786 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 ARL4DP49703 201 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 GRM2Q14416 872 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 MAP4K3Q8IVH8 894 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 SLC7A3Q8WY07 619 aa9.22□□□□□ -0.93
CHEK1-211ENST00000531062 BCO2Q9BYV7 579 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms