RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 OGFOD1Q8N543 542 aa20.22■□□□□ 0.83
CHMP4A-204ENST00000530996 MYH16Q9H6N6 1097 aa20.22■□□□□ 0.83
CHMP4A-204ENST00000530996 SPEF2Q9C093 1822 aa20.21■□□□□ 0.83
CHMP4A-204ENST00000530996 MPHOSPH8Q99549 860 aa20.21■□□□□ 0.83
CHMP4A-204ENST00000530996 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
CHMP4A-204ENST00000530996 SCAF8Q9UPN6 1271 aaKnown RBP20.21■□□□□ 0.83
CHMP4A-204ENST00000530996 FANCIQ9NVI1 1328 aa20.21■□□□□ 0.83
CHMP4A-204ENST00000530996 WTIPA6NIX2 430 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 ITGA6P23229 1130 aa20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 TTLL12Q14166 644 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 GMLQ99445 158 aa20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 MXD3Q9BW11 206 aa20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 SAGE1Q9NXZ1 904 aa20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 IL16Q14005 1332 aa20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 MYO3BQ8WXR4 1341 aa20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 PITPNM2Q9BZ72 1349 aa20.2■□□□□ 0.82
CHMP4A-204ENST00000530996 TRPA1O75762 1119 aa20.19■□□□□ 0.82
CHMP4A-204ENST00000530996 GCKRQ14397 625 aa20.19■□□□□ 0.82
CHMP4A-204ENST00000530996 RASAL3Q86YV0 1011 aa20.19■□□□□ 0.82
CHMP4A-204ENST00000530996 DNAAF4Q8WXU2 420 aa20.19■□□□□ 0.82
CHMP4A-204ENST00000530996 COA1Q9GZY4 146 aa20.19■□□□□ 0.82
CHMP4A-204ENST00000530996 PAPPA2Q9BXP8 1791 aa20.18■□□□□ 0.82
CHMP4A-204ENST00000530996 H7C1W4 665 aa20.18■□□□□ 0.82
CHMP4A-204ENST00000530996 FKBP1BP68106 108 aa20.18■□□□□ 0.82
CHMP4A-204ENST00000530996 MLLT1Q03111 559 aaPredicted RBP20.18■□□□□ 0.82
CHMP4A-204ENST00000530996 ANKRD2Q9GZV1 360 aa20.18■□□□□ 0.82
CHMP4A-204ENST00000530996 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
CHMP4A-204ENST00000530996 ZNF804BA4D1E1 1349 aa20.18■□□□□ 0.82
CHMP4A-204ENST00000530996 SASH1O94885 1247 aa20.17■□□□□ 0.82
CHMP4A-204ENST00000530996 NF2P35240 595 aa20.17■□□□□ 0.82
CHMP4A-204ENST00000530996 NBPF9Q3BBW0 867 aa20.17■□□□□ 0.82
CHMP4A-204ENST00000530996 DACT2Q5SW24 774 aa20.17■□□□□ 0.82
CHMP4A-204ENST00000530996 STRIP1Q5VSL9 837 aa20.17■□□□□ 0.82
CHMP4A-204ENST00000530996 RNF186Q9NXI6 227 aa20.17■□□□□ 0.82
CHMP4A-204ENST00000530996 LEMD3Q9Y2U8 911 aa20.17■□□□□ 0.82
CHMP4A-204ENST00000530996 PSME4Q14997 1843 aa20.16■□□□□ 0.82
CHMP4A-204ENST00000530996 MYH3P11055 1940 aa20.16■□□□□ 0.82
CHMP4A-204ENST00000530996 KLRK1P26718 216 aa20.16■□□□□ 0.82
CHMP4A-204ENST00000530996 PRAMEF18Q5VWM3 479 aa20.16■□□□□ 0.82
CHMP4A-204ENST00000530996 MOB2Q70IA6 237 aa20.15■□□□□ 0.82
CHMP4A-204ENST00000530996 TXNRD3Q86VQ6 643 aa20.15■□□□□ 0.82
CHMP4A-204ENST00000530996 KIAA0825Q8IV33 1275 aa20.15■□□□□ 0.82
CHMP4A-204ENST00000530996 LINS1Q8NG48 757 aa20.15■□□□□ 0.82
CHMP4A-204ENST00000530996 PLA2G12BQ9BX93 195 aa20.15■□□□□ 0.82
CHMP4A-204ENST00000530996 HDAC9Q9UKV0 1011 aa20.15■□□□□ 0.82
CHMP4A-204ENST00000530996 ANKRD18BA2A2Z9 1011 aa20.14■□□□□ 0.81
CHMP4A-204ENST00000530996 ANP32CO43423 234 aa20.14■□□□□ 0.81
CHMP4A-204ENST00000530996 CHRNDQ07001 517 aa20.14■□□□□ 0.81
CHMP4A-204ENST00000530996 TTLL5Q6EMB2 1281 aa20.14■□□□□ 0.81
CHMP4A-204ENST00000530996 UBE2Q2LH0YL09 131 aa20.13■□□□□ 0.81
CHMP4A-204ENST00000530996 WNT10BO00744 389 aa20.13■□□□□ 0.81
CHMP4A-204ENST00000530996 GTF2IP78347 998 aa20.13■□□□□ 0.81
CHMP4A-204ENST00000530996 CSRNP1Q96S65 589 aa20.13■□□□□ 0.81
CHMP4A-204ENST00000530996 CASP8AP2Q9UKL3 1982 aa20.13■□□□□ 0.81
CHMP4A-204ENST00000530996 EXOSC9Q06265 439 aaKnown RBP20.12■□□□□ 0.81
CHMP4A-204ENST00000530996 MKRN3Q13064 507 aaKnown RBP20.12■□□□□ 0.81
CHMP4A-204ENST00000530996 APOBEC3FQ8IUX4 373 aaKnown RBP20.12■□□□□ 0.81
CHMP4A-204ENST00000530996 REM2Q8IYK8 340 aaPredicted RBP20.12■□□□□ 0.81
CHMP4A-204ENST00000530996 F6X3S4 739 aa20.11■□□□□ 0.81
CHMP4A-204ENST00000530996 CASP7P55210 303 aa20.11■□□□□ 0.81
CHMP4A-204ENST00000530996 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
CHMP4A-204ENST00000530996 PRKG1Q13976 671 aa20.11■□□□□ 0.81
CHMP4A-204ENST00000530996 TAF7LQ5H9L4 462 aa20.11■□□□□ 0.81
CHMP4A-204ENST00000530996 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
CHMP4A-204ENST00000530996 HELBQ8NG08 1087 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-204ENST00000530996 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-204ENST00000530996 TAF5LO75529 589 aa20.09■□□□□ 0.81
CHMP4A-204ENST00000530996 CSF1RP07333 972 aa20.09■□□□□ 0.81
CHMP4A-204ENST00000530996 ARMC9Q7Z3E5 817 aa20.09■□□□□ 0.81
CHMP4A-204ENST00000530996 ZNF804AQ7Z570 1209 aa20.09■□□□□ 0.81
CHMP4A-204ENST00000530996 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
CHMP4A-204ENST00000530996 SNAP23O00161 211 aa20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 VAMP4O75379 141 aa20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 MMP14P50281 582 aa20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 SOX10P56693 466 aa20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 DLGAP5Q15398 846 aa20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 CTU1Q7Z7A3 348 aaKnown RBP20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 CD209Q9NNX6 404 aa20.08■□□□□ 0.81
CHMP4A-204ENST00000530996 F8W031 263 aaPredicted RBP20.07■□□□□ 0.8
CHMP4A-204ENST00000530996 PLIN1O60240 522 aa20.07■□□□□ 0.8
CHMP4A-204ENST00000530996 RGS19P49795 217 aa20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 SREBF2Q12772 1141 aa20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 CCDC57Q2TAC2 916 aa20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 BEND3Q5T5X7 828 aa20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 LMBR1LQ6UX01 489 aa20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 CNNM1Q9NRU3 951 aa20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 JAG2Q9Y219 1238 aa20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 ZNF646O15015 1829 aaPredicted RBP20.06■□□□□ 0.8
CHMP4A-204ENST00000530996 COL1A1P02452 1464 aaPredicted RBP20.05■□□□□ 0.8
CHMP4A-204ENST00000530996 MYO1BO43795 1136 aa20.05■□□□□ 0.8
CHMP4A-204ENST00000530996 TBC1D8O95759 1140 aa20.05■□□□□ 0.8
CHMP4A-204ENST00000530996 SLC4A10Q6U841 1118 aa20.05■□□□□ 0.8
CHMP4A-204ENST00000530996 C9orf78Q9NZ63 289 aaPredicted RBP20.05■□□□□ 0.8
CHMP4A-204ENST00000530996 ANGEL1Q9UNK9 670 aaKnown RBP20.05■□□□□ 0.8
CHMP4A-204ENST00000530996 GRM8O00222 908 aa20.04■□□□□ 0.8
CHMP4A-204ENST00000530996 FOXO4P98177 505 aa20.04■□□□□ 0.8
CHMP4A-204ENST00000530996 FAM9BQ8IZU0 186 aa20.04■□□□□ 0.8
CHMP4A-204ENST00000530996 VEZTQ9HBM0 779 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms