RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 H7C1W4 665 aa23.28■■□□□ 1.32
PSMC3-208ENST00000530887 CCT4P50991 539 aaKnown RBP23.28■■□□□ 1.32
PSMC3-208ENST00000530887 ANGEL2Q5VTE6 544 aaKnown RBP23.28■■□□□ 1.32
PSMC3-208ENST00000530887 SLC4A2P04920 1241 aa23.27■■□□□ 1.32
PSMC3-208ENST00000530887 NF2P35240 595 aa23.27■■□□□ 1.32
PSMC3-208ENST00000530887 MLLT1Q03111 559 aaPredicted RBP23.27■■□□□ 1.32
PSMC3-208ENST00000530887 MPHOSPH8Q99549 860 aa23.27■■□□□ 1.32
PSMC3-208ENST00000530887 MCOLN1Q9GZU1 580 aa23.27■■□□□ 1.32
PSMC3-208ENST00000530887 GREM2Q9H772 168 aa23.27■■□□□ 1.32
PSMC3-208ENST00000530887 CASP8AP2Q9UKL3 1982 aa23.27■■□□□ 1.32
PSMC3-208ENST00000530887 PAPPA2Q9BXP8 1791 aa23.27■■□□□ 1.32
PSMC3-208ENST00000530887 AKAP11Q9UKA4 1901 aa23.26■■□□□ 1.31
PSMC3-208ENST00000530887 KIF23Q02241 960 aaPredicted RBP23.26■■□□□ 1.31
PSMC3-208ENST00000530887 DGKZQ13574 1117 aa23.26■■□□□ 1.31
PSMC3-208ENST00000530887 HDAC9Q9UKV0 1011 aa23.26■■□□□ 1.31
PSMC3-208ENST00000530887 FLIIQ13045 1269 aa23.25■■□□□ 1.31
PSMC3-208ENST00000530887 UBE3BQ7Z3V4 1068 aa23.25■■□□□ 1.31
PSMC3-208ENST00000530887 LINS1Q8NG48 757 aa23.25■■□□□ 1.31
PSMC3-208ENST00000530887 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
PSMC3-208ENST00000530887 GCKRQ14397 625 aa23.24■■□□□ 1.31
PSMC3-208ENST00000530887 JARID2Q92833 1246 aaPredicted RBP23.24■■□□□ 1.31
PSMC3-208ENST00000530887 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
PSMC3-208ENST00000530887 CWF19L2Q2TBE0 894 aaKnown RBP23.23■■□□□ 1.31
PSMC3-208ENST00000530887 DACT2Q5SW24 774 aa23.23■■□□□ 1.31
PSMC3-208ENST00000530887 WDR63Q8IWG1 891 aa23.23■■□□□ 1.31
PSMC3-208ENST00000530887 DNAAF4Q8WXU2 420 aa23.23■■□□□ 1.31
PSMC3-208ENST00000530887 ITGA6P23229 1130 aa23.22■■□□□ 1.31
PSMC3-208ENST00000530887 FAM161AQ3B820 660 aa23.22■■□□□ 1.31
PSMC3-208ENST00000530887 RNF186Q9NXI6 227 aa23.22■■□□□ 1.31
PSMC3-208ENST00000530887 ZNF804BA4D1E1 1349 aa23.22■■□□□ 1.31
PSMC3-208ENST00000530887 CSF1RP07333 972 aa23.21■■□□□ 1.31
PSMC3-208ENST00000530887 KCNJ4P48050 445 aa23.21■■□□□ 1.31
PSMC3-208ENST00000530887 RASAL3Q86YV0 1011 aa23.21■■□□□ 1.31
PSMC3-208ENST00000530887 APOBEC3FQ8IUX4 373 aaKnown RBP23.21■■□□□ 1.31
PSMC3-208ENST00000530887 ZIC5Q96T25 663 aa23.21■■□□□ 1.31
PSMC3-208ENST00000530887 ANKRD18BA2A2Z9 1011 aa23.2■■□□□ 1.3
PSMC3-208ENST00000530887 TTLL5Q6EMB2 1281 aa23.2■■□□□ 1.3
PSMC3-208ENST00000530887 DLK2Q6UY11 383 aa23.2■■□□□ 1.3
PSMC3-208ENST00000530887 CSRNP1Q96S65 589 aa23.2■■□□□ 1.3
PSMC3-208ENST00000530887 TRPA1O75762 1119 aa23.19■■□□□ 1.3
PSMC3-208ENST00000530887 COL1A1P02452 1464 aaPredicted RBP23.18■■□□□ 1.3
PSMC3-208ENST00000530887 ASTN2O75129 1339 aaPredicted RBP23.18■■□□□ 1.3
PSMC3-208ENST00000530887 WNT10BO00744 389 aa23.18■■□□□ 1.3
PSMC3-208ENST00000530887 PKN2Q16513 984 aaKnown RBP23.18■■□□□ 1.3
PSMC3-208ENST00000530887 FBXW7Q969H0 707 aa23.18■■□□□ 1.3
PSMC3-208ENST00000530887 NOM1Q5C9Z4 860 aaKnown RBP23.17■■□□□ 1.3
PSMC3-208ENST00000530887 C15orf52Q6ZUT6 534 aaKnown RBP23.17■■□□□ 1.3
PSMC3-208ENST00000530887 G2E3Q7L622 706 aa23.17■■□□□ 1.3
PSMC3-208ENST00000530887 ARMC9Q7Z3E5 817 aa23.17■■□□□ 1.3
PSMC3-208ENST00000530887 FANCIQ9NVI1 1328 aa23.16■■□□□ 1.3
PSMC3-208ENST00000530887 CASP7P55210 303 aa23.16■■□□□ 1.3
PSMC3-208ENST00000530887 SREBF2Q12772 1141 aa23.16■■□□□ 1.3
PSMC3-208ENST00000530887 IFIT5Q13325 482 aaKnown RBP23.16■■□□□ 1.3
PSMC3-208ENST00000530887 TTLL12Q14166 644 aaPredicted RBP23.16■■□□□ 1.3
PSMC3-208ENST00000530887 CTU1Q7Z7A3 348 aaKnown RBP23.16■■□□□ 1.3
PSMC3-208ENST00000530887 SPEF2Q9C093 1822 aa23.15■■□□□ 1.3
PSMC3-208ENST00000530887 ANP32CO43423 234 aa23.15■■□□□ 1.3
PSMC3-208ENST00000530887 FKBP1AP62942 108 aaKnown RBP23.15■■□□□ 1.3
PSMC3-208ENST00000530887 NBPF9Q3BBW0 867 aa23.15■■□□□ 1.3
PSMC3-208ENST00000530887 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
PSMC3-208ENST00000530887 PPP2R3BQ9Y5P8 575 aa23.15■■□□□ 1.3
PSMC3-208ENST00000530887 UNCXA6NJT0 531 aa23.14■■□□□ 1.29
PSMC3-208ENST00000530887 VAMP4O75379 141 aa23.14■■□□□ 1.29
PSMC3-208ENST00000530887 CHRNDQ07001 517 aa23.14■■□□□ 1.29
PSMC3-208ENST00000530887 ZNF804AQ7Z570 1209 aa23.14■■□□□ 1.29
PSMC3-208ENST00000530887 MYO1BO43795 1136 aa23.13■■□□□ 1.29
PSMC3-208ENST00000530887 MTMR14Q8NCE2 650 aa23.13■■□□□ 1.29
PSMC3-208ENST00000530887 CD209Q9NNX6 404 aa23.13■■□□□ 1.29
PSMC3-208ENST00000530887 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
PSMC3-208ENST00000530887 TM4SF4P48230 202 aa23.12■■□□□ 1.29
PSMC3-208ENST00000530887 GTF2IP78347 998 aa23.12■■□□□ 1.29
PSMC3-208ENST00000530887 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
PSMC3-208ENST00000530887 DLGAP5Q15398 846 aa23.11■■□□□ 1.29
PSMC3-208ENST00000530887 CCDC57Q2TAC2 916 aa23.11■■□□□ 1.29
PSMC3-208ENST00000530887 TXNRD3Q86VQ6 643 aa23.11■■□□□ 1.29
PSMC3-208ENST00000530887 KIAA0825Q8IV33 1275 aa23.11■■□□□ 1.29
PSMC3-208ENST00000530887 UBE2Q2LH0YL09 131 aa23.1■■□□□ 1.29
PSMC3-208ENST00000530887 INHBEP58166 350 aa23.1■■□□□ 1.29
PSMC3-208ENST00000530887 ZBED3Q96IU2 234 aaPredicted RBP23.1■■□□□ 1.29
PSMC3-208ENST00000530887 CFHR5Q9BXR6 569 aa23.1■■□□□ 1.29
PSMC3-208ENST00000530887 IL1R1P14778 569 aa23.09■■□□□ 1.29
PSMC3-208ENST00000530887 TAF7LQ5H9L4 462 aa23.09■■□□□ 1.29
PSMC3-208ENST00000530887 ZNF646O15015 1829 aaPredicted RBP23.09■■□□□ 1.29
PSMC3-208ENST00000530887 WTIPA6NIX2 430 aaPredicted RBP23.08■■□□□ 1.29
PSMC3-208ENST00000530887 PPP1R12BO60237 982 aaPredicted RBP23.08■■□□□ 1.29
PSMC3-208ENST00000530887 ALDH1L1O75891 902 aa23.08■■□□□ 1.29
PSMC3-208ENST00000530887 SASH1O94885 1247 aa23.08■■□□□ 1.29
PSMC3-208ENST00000530887 CCDC184Q52MB2 194 aa23.08■■□□□ 1.29
PSMC3-208ENST00000530887 BEND3Q5T5X7 828 aa23.08■■□□□ 1.29
PSMC3-208ENST00000530887 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.29
PSMC3-208ENST00000530887 GRM8O00222 908 aa23.07■■□□□ 1.28
PSMC3-208ENST00000530887 EXOSC9Q06265 439 aaKnown RBP23.07■■□□□ 1.28
PSMC3-208ENST00000530887 MAP3K11Q16584 847 aa23.07■■□□□ 1.28
PSMC3-208ENST00000530887 SUPT20HL1Q3ZLR7 823 aa23.07■■□□□ 1.28
PSMC3-208ENST00000530887 MXD3Q9BW11 206 aa23.07■■□□□ 1.28
PSMC3-208ENST00000530887 FOXO4P98177 505 aa23.06■■□□□ 1.28
PSMC3-208ENST00000530887 LDLRAD1Q5T700 205 aa23.06■■□□□ 1.28
PSMC3-208ENST00000530887 LDHAL6AQ6ZMR3 332 aa23.06■■□□□ 1.28
PSMC3-208ENST00000530887 DEFB129Q9H1M3 183 aa23.06■■□□□ 1.28
PSMC3-208ENST00000530887 C9orf78Q9NZ63 289 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms