RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ELNP15502 786 aa12.6□□□□□ -0.39
CSDE1-213ENST00000530784 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
CSDE1-213ENST00000530784 POP1Q99575 1024 aaKnown RBP12.6□□□□□ -0.39
CSDE1-213ENST00000530784 DZANK1Q9NVP4 752 aa12.6□□□□□ -0.39
CSDE1-213ENST00000530784 NFKBIEO00221 500 aa12.59□□□□□ -0.39
CSDE1-213ENST00000530784 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
CSDE1-213ENST00000530784 DTWD1Q8N5C7 304 aa12.59□□□□□ -0.39
CSDE1-213ENST00000530784 HHIPQ96QV1 700 aa12.59□□□□□ -0.39
CSDE1-213ENST00000530784 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
CSDE1-213ENST00000530784 AMOTL2Q9Y2J4 779 aa12.59□□□□□ -0.39
CSDE1-213ENST00000530784 MSTNO14793 375 aa12.58□□□□□ -0.4
CSDE1-213ENST00000530784 DEAF1O75398 565 aaPredicted RBP12.58□□□□□ -0.4
CSDE1-213ENST00000530784 IGHA1P01876 353 aa12.58□□□□□ -0.4
CSDE1-213ENST00000530784 IGHA2P01877 340 aa12.58□□□□□ -0.4
CSDE1-213ENST00000530784 POLR3DP05423 398 aaPredicted RBP12.58□□□□□ -0.4
CSDE1-213ENST00000530784 SHISA2Q6UWI4 295 aa12.58□□□□□ -0.4
CSDE1-213ENST00000530784 FBXO11Q86XK2 927 aa12.58□□□□□ -0.4
CSDE1-213ENST00000530784 GPR182O15218 404 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 PROCP04070 461 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 EDN3P14138 238 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 SELPP16109 830 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 CACTIN-AS1Q8N1I8 211 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 OSMRQ99650 979 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 RBCK1Q9BYM8 510 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 LATS2Q9NRM7 1088 aa12.57□□□□□ -0.4
CSDE1-213ENST00000530784 CDC27P30260 824 aa12.56□□□□□ -0.4
CSDE1-213ENST00000530784 ORC1Q13415 861 aa12.56□□□□□ -0.4
CSDE1-213ENST00000530784 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
CSDE1-213ENST00000530784 ZKSCAN3Q9BRR0 538 aa12.56□□□□□ -0.4
CSDE1-213ENST00000530784 NIF3L1Q9GZT8 377 aa12.56□□□□□ -0.4
CSDE1-213ENST00000530784 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
CSDE1-213ENST00000530784 DCTN4Q9UJW0 460 aa12.56□□□□□ -0.4
CSDE1-213ENST00000530784 PPME1Q9Y570 386 aa12.56□□□□□ -0.4
CSDE1-213ENST00000530784 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
CSDE1-213ENST00000530784 PEAR1Q5VY43 1037 aaPredicted RBP12.55□□□□□ -0.4
CSDE1-213ENST00000530784 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
CSDE1-213ENST00000530784 NACC1Q96RE7 527 aa12.55□□□□□ -0.4
CSDE1-213ENST00000530784 NEFLP07196 543 aa12.54□□□□□ -0.4
CSDE1-213ENST00000530784 PTPRAP18433 802 aa12.54□□□□□ -0.4
CSDE1-213ENST00000530784 CDC25BP30305 580 aa12.54□□□□□ -0.4
CSDE1-213ENST00000530784 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
CSDE1-213ENST00000530784 ADAM19Q9H013 955 aa12.54□□□□□ -0.4
CSDE1-213ENST00000530784 LINC01387J3KSC0 135 aa12.53□□□□□ -0.4
CSDE1-213ENST00000530784 TXNDC11Q6PKC3 985 aa12.53□□□□□ -0.4
CSDE1-213ENST00000530784 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
CSDE1-213ENST00000530784 TMEM102Q8N9M5 508 aaPredicted RBP12.53□□□□□ -0.4
CSDE1-213ENST00000530784 MUC3BQ9H195 1237 aa12.53□□□□□ -0.4
CSDE1-213ENST00000530784 C9orf172C9J069 976 aa12.52□□□□□ -0.41
CSDE1-213ENST00000530784 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.41
CSDE1-213ENST00000530784 EPHA1P21709 976 aa12.52□□□□□ -0.41
CSDE1-213ENST00000530784 MAPK1P28482 360 aa12.52□□□□□ -0.41
CSDE1-213ENST00000530784 GALNT12Q8IXK2 581 aa12.52□□□□□ -0.41
CSDE1-213ENST00000530784 NXPE3Q969Y0 559 aa12.52□□□□□ -0.41
CSDE1-213ENST00000530784 LENG1Q96BZ8 264 aaPredicted RBP12.52□□□□□ -0.41
CSDE1-213ENST00000530784 DMRTB1Q96MA1 342 aa12.52□□□□□ -0.41
CSDE1-213ENST00000530784 DLL1O00548 723 aa12.5□□□□□ -0.41
CSDE1-213ENST00000530784 CPNE3O75131 537 aaKnown RBP12.5□□□□□ -0.41
CSDE1-213ENST00000530784 EIF1AYO14602 144 aaKnown RBP12.49□□□□□ -0.41
CSDE1-213ENST00000530784 GATA4P43694 442 aa12.49□□□□□ -0.41
CSDE1-213ENST00000530784 ALKBH8Q96BT7 664 aaKnown RBP12.49□□□□□ -0.41
CSDE1-213ENST00000530784 SRA1Q9HD15 236 aaKnown RBP12.49□□□□□ -0.41
CSDE1-213ENST00000530784 USP21Q9UK80 565 aa12.49□□□□□ -0.41
CSDE1-213ENST00000530784 A0A1W2PP55 124 aa12.48□□□□□ -0.41
CSDE1-213ENST00000530784 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
CSDE1-213ENST00000530784 ADGRE1Q14246 886 aa12.48□□□□□ -0.41
CSDE1-213ENST00000530784 MBTPS1Q14703 1052 aa12.48□□□□□ -0.41
CSDE1-213ENST00000530784 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
CSDE1-213ENST00000530784 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
CSDE1-213ENST00000530784 GALNT11Q8NCW6 608 aa12.48□□□□□ -0.41
CSDE1-213ENST00000530784 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
CSDE1-213ENST00000530784 SOX13Q9UN79 622 aa12.47□□□□□ -0.41
CSDE1-213ENST00000530784 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
CSDE1-213ENST00000530784 FSCN2O14926 492 aa12.46□□□□□ -0.41
CSDE1-213ENST00000530784 NRG1Q02297 640 aaPredicted RBP12.46□□□□□ -0.41
CSDE1-213ENST00000530784 ASAP3Q8TDY4 903 aa12.46□□□□□ -0.41
CSDE1-213ENST00000530784 CSRNP1Q96S65 589 aa12.46□□□□□ -0.41
CSDE1-213ENST00000530784 BHLHE41Q9C0J9 482 aaPredicted RBP12.46□□□□□ -0.41
CSDE1-213ENST00000530784 DNAJC25Q9H1X3 360 aa12.46□□□□□ -0.41
CSDE1-213ENST00000530784 METTL12A8MUP2 240 aa12.45□□□□□ -0.42
CSDE1-213ENST00000530784 H3BRJ5 948 aa12.45□□□□□ -0.42
CSDE1-213ENST00000530784 TM4SF5O14894 197 aa12.45□□□□□ -0.42
CSDE1-213ENST00000530784 FAM117BQ6P1L5 589 aa12.45□□□□□ -0.42
CSDE1-213ENST00000530784 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
CSDE1-213ENST00000530784 CCDC74AQ96AQ1 378 aa12.45□□□□□ -0.42
CSDE1-213ENST00000530784 NPHS2Q9NP85 383 aa12.45□□□□□ -0.42
CSDE1-213ENST00000530784 CABP4P57796 275 aa12.44□□□□□ -0.42
CSDE1-213ENST00000530784 DSC3Q14574 896 aa12.44□□□□□ -0.42
CSDE1-213ENST00000530784 TREHO43280 583 aa12.43□□□□□ -0.42
CSDE1-213ENST00000530784 VN1R5Q7Z5H4 357 aa12.43□□□□□ -0.42
CSDE1-213ENST00000530784 LIN7BQ9HAP6 207 aa12.43□□□□□ -0.42
CSDE1-213ENST00000530784 PLCB3Q01970 1234 aa12.42□□□□□ -0.42
CSDE1-213ENST00000530784 DOC2BQ14184 412 aa12.42□□□□□ -0.42
CSDE1-213ENST00000530784 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
CSDE1-213ENST00000530784 KIAA0319Q5VV43 1072 aa12.42□□□□□ -0.42
CSDE1-213ENST00000530784 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
CSDE1-213ENST00000530784 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
CSDE1-213ENST00000530784 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
CSDE1-213ENST00000530784 KLHDC7BQ96G42 594 aa12.42□□□□□ -0.42
CSDE1-213ENST00000530784 TCF12Q99081 682 aa12.42□□□□□ -0.42
CSDE1-213ENST00000530784 KCNK4Q9NYG8 393 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms