RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 DDX11Q96FC9 970 aa25.74■■□□□ 1.71
RDX-211ENST00000530749 E7EWF7 191 aa25.73■■□□□ 1.71
RDX-211ENST00000530749 HCLS1P14317 486 aaPredicted RBP25.73■■□□□ 1.71
RDX-211ENST00000530749 ATP6V1AP38606 617 aa25.73■■□□□ 1.71
RDX-211ENST00000530749 HAND2P61296 217 aa25.73■■□□□ 1.71
RDX-211ENST00000530749 APOBRQ0VD83 1088 aa25.73■■□□□ 1.71
RDX-211ENST00000530749 INTS5Q6P9B9 1019 aaKnown RBP25.73■■□□□ 1.71
RDX-211ENST00000530749 PPP1R9BQ96SB3 815 aa25.73■■□□□ 1.71
RDX-211ENST00000530749 PUS7LQ9H0K6 701 aaKnown RBP25.73■■□□□ 1.71
RDX-211ENST00000530749 UBE2HP62256 183 aa25.72■■□□□ 1.71
RDX-211ENST00000530749 SCRN1Q12765 414 aa25.72■■□□□ 1.71
RDX-211ENST00000530749 ZNF34Q8IZ26 560 aa25.72■■□□□ 1.71
RDX-211ENST00000530749 SYAP1Q96A49 352 aaPredicted RBP25.72■■□□□ 1.71
RDX-211ENST00000530749 SNAP23O00161 211 aa25.72■■□□□ 1.71
RDX-211ENST00000530749 DHX32Q7L7V1 743 aaKnown RBP25.72■■□□□ 1.71
RDX-211ENST00000530749 VGLL2Q8N8G2 317 aa25.72■■□□□ 1.71
RDX-211ENST00000530749 ANP32BQ92688 251 aaKnown RBP25.72■■□□□ 1.71
RDX-211ENST00000530749 PDE8AO60658 829 aa25.71■■□□□ 1.71
RDX-211ENST00000530749 CRKLP46109 303 aaKnown RBP25.71■■□□□ 1.71
RDX-211ENST00000530749 ERVV-1B6SEH8 477 aa25.71■■□□□ 1.71
RDX-211ENST00000530749 EIF5P55010 431 aaKnown RBP25.71■■□□□ 1.71
RDX-211ENST00000530749 ITPK1Q13572 414 aa25.71■■□□□ 1.71
RDX-211ENST00000530749 SUSD4Q5VX71 490 aa25.71■■□□□ 1.71
RDX-211ENST00000530749 NRAPQ86VF7 1730 aa25.71■■□□□ 1.71
RDX-211ENST00000530749 MYO5AQ9Y4I1 1855 aaKnown RBP25.7■■□□□ 1.71
RDX-211ENST00000530749 PHLPP1O60346 1717 aa25.7■■□□□ 1.71
RDX-211ENST00000530749 AKAP11Q9UKA4 1901 aa25.7■■□□□ 1.7
RDX-211ENST00000530749 NWD2Q9ULI1 1742 aa25.7■■□□□ 1.7
RDX-211ENST00000530749 FOSBP53539 338 aa25.69■■□□□ 1.7
RDX-211ENST00000530749 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
RDX-211ENST00000530749 TTC6Q86TZ1 520 aa25.69■■□□□ 1.7
RDX-211ENST00000530749 TSPY26PQ9H489 355 aa25.69■■□□□ 1.7
RDX-211ENST00000530749 CCDC87Q9NVE4 849 aa25.69■■□□□ 1.7
RDX-211ENST00000530749 ESPNB1AK53 854 aa25.69■■□□□ 1.7
RDX-211ENST00000530749 PDCP20941 246 aa25.69■■□□□ 1.7
RDX-211ENST00000530749 CCT2P78371 535 aaKnown RBP25.69■■□□□ 1.7
RDX-211ENST00000530749 GPHNQ9NQX3 736 aaPredicted RBP25.69■■□□□ 1.7
RDX-211ENST00000530749 NAP1L2Q9ULW6 460 aaPredicted RBP25.69■■□□□ 1.7
RDX-211ENST00000530749 LOC102724428A0A0B4J2F2 783 aa25.68■■□□□ 1.7
RDX-211ENST00000530749 KCNQ2O43526 872 aa25.68■■□□□ 1.7
RDX-211ENST00000530749 SIK1P57059 783 aa25.68■■□□□ 1.7
RDX-211ENST00000530749 EXOSC10Q01780 885 aaKnown RBP25.68■■□□□ 1.7
RDX-211ENST00000530749 NCOA5Q9HCD5 579 aaKnown RBP25.68■■□□□ 1.7
RDX-211ENST00000530749 TFIP11Q9UBB9 837 aaKnown RBP25.68■■□□□ 1.7
RDX-211ENST00000530749 PHKA1P46020 1223 aa25.68■■□□□ 1.7
RDX-211ENST00000530749 MYH14Q7Z406 1995 aaKnown RBP25.68■■□□□ 1.7
RDX-211ENST00000530749 PDE8BO95263 885 aa25.67■■□□□ 1.7
RDX-211ENST00000530749 CCDC183Q5T5S1 534 aa25.67■■□□□ 1.7
RDX-211ENST00000530749 SEC31BQ9NQW1 1179 aa25.67■■□□□ 1.7
RDX-211ENST00000530749 MYH7P12883 1935 aa25.67■■□□□ 1.7
RDX-211ENST00000530749 FGAP02671 866 aa25.66■■□□□ 1.7
RDX-211ENST00000530749 HMGB1P09429 215 aaKnown RBP25.66■■□□□ 1.7
RDX-211ENST00000530749 APPBP2Q92624 585 aa25.66■■□□□ 1.7
RDX-211ENST00000530749 LTBP4Q8N2S1 1624 aa25.66■■□□□ 1.7
RDX-211ENST00000530749 PIH1D3Q9NQM4 214 aaKnown RBP25.65■■□□□ 1.7
RDX-211ENST00000530749 GPAA1O43292 621 aa25.65■■□□□ 1.7
RDX-211ENST00000530749 CTDNEP1O95476 244 aa25.65■■□□□ 1.7
RDX-211ENST00000530749 KRT85P78386 507 aa25.65■■□□□ 1.7
RDX-211ENST00000530749 CDCA7Q9BWT1 371 aaPredicted RBP25.65■■□□□ 1.7
RDX-211ENST00000530749 PFKFB2O60825 505 aa25.64■■□□□ 1.7
RDX-211ENST00000530749 ZFYP08048 801 aaPredicted RBP25.64■■□□□ 1.7
RDX-211ENST00000530749 KCNQ4P56696 695 aa25.64■■□□□ 1.7
RDX-211ENST00000530749 CCDC102BQ68D86 513 aa25.64■■□□□ 1.7
RDX-211ENST00000530749 SPATA31A5Q5VU36 1347 aa25.64■■□□□ 1.7
RDX-211ENST00000530749 SPATA31A7Q8IWB4 1347 aa25.64■■□□□ 1.7
RDX-211ENST00000530749 IDH1O75874 414 aaKnown RBP25.64■■□□□ 1.69
RDX-211ENST00000530749 PHF14O94880 888 aa25.63■■□□□ 1.69
RDX-211ENST00000530749 SLC9C2Q5TAH2 1124 aa25.63■■□□□ 1.69
RDX-211ENST00000530749 TICAM2Q86XR7 235 aa25.63■■□□□ 1.69
RDX-211ENST00000530749 NSUN7Q8NE18 718 aaKnown RBP25.63■■□□□ 1.69
RDX-211ENST00000530749 THRAP3Q9Y2W1 955 aaKnown RBP25.63■■□□□ 1.69
RDX-211ENST00000530749 CAMTA2O94983 1202 aa25.63■■□□□ 1.69
RDX-211ENST00000530749 GIMAP6Q6P9H5 292 aa25.63■■□□□ 1.69
RDX-211ENST00000530749 AGXT2Q9BYV1 514 aa25.63■■□□□ 1.69
RDX-211ENST00000530749 LRRFIP1Q32MZ4 808 aaKnown RBP25.62■■□□□ 1.69
RDX-211ENST00000530749 DENND2AQ9ULE3 1009 aa25.62■■□□□ 1.69
RDX-211ENST00000530749 CSPP1Q1MSJ5 1256 aa25.61■■□□□ 1.69
RDX-211ENST00000530749 SMIM5Q71RC9 77 aa25.61■■□□□ 1.69
RDX-211ENST00000530749 FAM184AQ8NB25 1140 aa25.61■■□□□ 1.69
RDX-211ENST00000530749 SMARCC2Q8TAQ2 1214 aa25.61■■□□□ 1.69
RDX-211ENST00000530749 PDLIM2Q96JY6 352 aa25.61■■□□□ 1.69
RDX-211ENST00000530749 PTPDC1A2A3K4 754 aa25.61■■□□□ 1.69
RDX-211ENST00000530749 WWC3Q9ULE0 1092 aa25.61■■□□□ 1.69
RDX-211ENST00000530749 H3BQV1 296 aa25.6■■□□□ 1.69
RDX-211ENST00000530749 CLCN1P35523 988 aa25.6■■□□□ 1.69
RDX-211ENST00000530749 ADD2P35612 726 aa25.6■■□□□ 1.69
RDX-211ENST00000530749 IMMTQ16891 758 aaKnown RBP25.6■■□□□ 1.69
RDX-211ENST00000530749 IFFO2Q5TF58 517 aa25.6■■□□□ 1.69
RDX-211ENST00000530749 RAB11FIP4Q86YS3 637 aa25.6■■□□□ 1.69
RDX-211ENST00000530749 UTP14AQ9BVJ6 771 aaKnown RBP25.6■■□□□ 1.69
RDX-211ENST00000530749 NIP7Q9Y221 180 aaKnown RBP eCLIP25.6■■□□□ 1.69
RDX-211ENST00000530749 PDIA3P30101 505 aaKnown RBP25.6■■□□□ 1.69
RDX-211ENST00000530749 NKX2-3Q8TAU0 364 aa25.6■■□□□ 1.69
RDX-211ENST00000530749 ABCC12Q96J65 1359 aa25.6■■□□□ 1.69
RDX-211ENST00000530749 LIG1P18858 919 aa25.59■■□□□ 1.69
RDX-211ENST00000530749 RESTQ13127 1097 aa25.59■■□□□ 1.69
RDX-211ENST00000530749 PUM3Q15397 648 aaKnown RBP25.59■■□□□ 1.69
RDX-211ENST00000530749 FGFR2P21802 821 aa25.58■■□□□ 1.69
RDX-211ENST00000530749 FAM98CQ17RN3 349 aaKnown RBP25.58■■□□□ 1.69
RDX-211ENST00000530749 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.58■■□□□ 1.694e-7■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms