RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 TRIM27P14373 513 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 LMOD1P29536 600 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 MMRN1Q13201 1228 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 DPP8Q6V1X1 898 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 ZC3H15Q8WU90 426 aaKnown RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 ABHD8Q96I13 439 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 HHIPL1Q96JK4 782 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 GMLQ99445 158 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 MYD88Q99836 296 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 PHAXQ9H814 394 aaKnown RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 PODXL2Q9NZ53 605 aa5.98□□□□□ -1.45
SSBP3-213ENST00000530618 ZBTB47Q9UFB7 747 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 TRMT112Q9UI30 125 aaKnown RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 ABT1Q9ULW3 272 aaKnown RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 ZBTB12Q9Y330 459 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 SUPT16HQ9Y5B9 1047 aaKnown RBP5.98□□□□□ -1.45
SSBP3-213ENST00000530618 POTEB2H3BUK9 544 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 HMMRO75330 724 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 CELF2O95319 508 aaKnown RBP5.97□□□□□ -1.45
SSBP3-213ENST00000530618 MAP2K2P36507 400 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 RGS19P49795 217 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 MAP2K1Q02750 393 aaPredicted RBP5.97□□□□□ -1.45
SSBP3-213ENST00000530618 MVPQ14764 893 aaKnown RBP5.97□□□□□ -1.45
SSBP3-213ENST00000530618 ERICH6BQ5W0A0 696 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 DDX46Q7L014 1031 aaKnown RBP5.97□□□□□ -1.45
SSBP3-213ENST00000530618 SAMD7Q7Z3H4 446 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 TMC4Q7Z404 712 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 MICALL2Q8IY33 904 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 REM2Q8IYK8 340 aaPredicted RBP5.97□□□□□ -1.45
SSBP3-213ENST00000530618 ZBTB38Q8NAP3 1195 aaPredicted RBP5.97□□□□□ -1.45
SSBP3-213ENST00000530618 SUPT20HQ8NEM7 779 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 TBC1D16Q8TBP0 767 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 DPF2Q92785 391 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 CLUAP1Q96AJ1 413 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 DBNDD1Q9H9R9 158 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 SEC31BQ9NQW1 1179 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 CNOT7Q9UIV1 285 aaKnown RBP5.97□□□□□ -1.45
SSBP3-213ENST00000530618 TSKSQ9UJT2 592 aa5.97□□□□□ -1.45
SSBP3-213ENST00000530618 NEURL1BA8MQ27 555 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 ADM5C9JUS6 153 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 GRM8O00222 908 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 ECE2O60344 883 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 GNAI2P04899 355 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 IGKV5-2P06315 115 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 VIL1P09327 827 aaKnown RBP5.96□□□□□ -1.46
SSBP3-213ENST00000530618 TAF7LQ5H9L4 462 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 RTL5Q5HYW3 569 aaPredicted RBP5.96□□□□□ -1.46
SSBP3-213ENST00000530618 INTS3Q68E01 1043 aaKnown RBP5.96□□□□□ -1.46
SSBP3-213ENST00000530618 AIDAQ96BJ3 306 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 IRS2Q9Y4H2 1338 aa5.96□□□□□ -1.46
SSBP3-213ENST00000530618 RBBP6Q7Z6E9 1792 aaKnown RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 SZT2Q5T011 3432 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 SSC5DA1L4H1 1573 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 F6X3S4 739 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 IRS4O14654 1257 aaPredicted RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 RIMBP2O15034 1052 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 PCCAP05165 728 aaPredicted RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 ECE1P42892 770 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 CASP7P55210 303 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 ZNF280AP59817 542 aaPredicted RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 RPS8P62241 208 aaKnown RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 GCKRQ14397 625 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 TNIP1Q15025 636 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 DOK7Q18PE1 504 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 WASHC4Q2M389 1173 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 CCDC152Q4G0S7 254 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 TBC1D10BQ4KMP7 808 aaPredicted RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 HSP90AB4PQ58FF6 505 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 BEND3Q5T5X7 828 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 CDC37L1Q7L3B6 337 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 G2E3Q7L622 706 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 USP48Q86UV5 1035 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 TMEM57Q8N5G2 664 aa5.95□□□□□ -1.46
SSBP3-213ENST00000530618 JARID2Q92833 1246 aaPredicted RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 NSFL1CQ9UNZ2 370 aaKnown RBP5.95□□□□□ -1.46
SSBP3-213ENST00000530618 KIAA0100Q14667 2235 aaKnown RBP5.94□□□□□ -1.46
SSBP3-213ENST00000530618 RANBP2P49792 3224 aaKnown RBP5.94□□□□□ -1.46
SSBP3-213ENST00000530618 PITPNM1O00562 1244 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 PLIN1O60240 522 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 PDE8AO60658 829 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 RPS12P25398 132 aaKnown RBP5.94□□□□□ -1.46
SSBP3-213ENST00000530618 CCDC57Q2TAC2 916 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 UBE3BQ7Z3V4 1068 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 CDC5LQ99459 802 aaKnown RBP5.94□□□□□ -1.46
SSBP3-213ENST00000530618 MCOLN1Q9GZU1 580 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 COG6Q9Y2V7 657 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 CHMP3Q9Y3E7 222 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 CEP290O15078 2479 aa5.94□□□□□ -1.46
SSBP3-213ENST00000530618 MED23Q9ULK4 1368 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 SLC34A2O95436 690 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 SLC10A3P09131 477 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 KLRK1P26718 216 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 IGHMBP2P38935 993 aaKnown RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 HUNKP57058 714 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 NOGQ13253 232 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 GRM1Q13255 1194 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 IFIT5Q13325 482 aaKnown RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 CWF19L2Q2TBE0 894 aaKnown RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 KIF4BQ2VIQ3 1234 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 FAM161AQ3B820 660 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms