RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 DOK7Q18PE1 504 aa26.39■■□□□ 1.81
CAPN1-220ENST00000530567 JDP2Q8WYK2 163 aa26.39■■□□□ 1.81
CAPN1-220ENST00000530567 DBNDD1Q9H9R9 158 aa26.39■■□□□ 1.81
CAPN1-220ENST00000530567 SCN9AQ15858 1988 aa26.39■■□□□ 1.81
CAPN1-220ENST00000530567 YDJCA8MPS7 323 aa26.38■■□□□ 1.81
CAPN1-220ENST00000530567 ATP2B3Q16720 1220 aa26.38■■□□□ 1.81
CAPN1-220ENST00000530567 LPIN2Q92539 896 aa26.37■■□□□ 1.81
CAPN1-220ENST00000530567 ZNRF3Q9ULT6 936 aa26.37■■□□□ 1.81
CAPN1-220ENST00000530567 ZNF541Q9H0D2 1346 aa26.36■■□□□ 1.81
CAPN1-220ENST00000530567 ECE2O60344 883 aa26.36■■□□□ 1.81
CAPN1-220ENST00000530567 HDAC1Q13547 482 aaPredicted RBP26.36■■□□□ 1.81
CAPN1-220ENST00000530567 DCTPP1Q9H773 170 aa26.36■■□□□ 1.81
CAPN1-220ENST00000530567 HSP90AB4PQ58FF6 505 aa26.35■■□□□ 1.81
CAPN1-220ENST00000530567 ERC1Q8IUD2 1116 aa26.35■■□□□ 1.81
CAPN1-220ENST00000530567 FAM84BQ96KN1 310 aaPredicted RBP26.35■■□□□ 1.81
CAPN1-220ENST00000530567 COA1Q9GZY4 146 aa26.35■■□□□ 1.81
CAPN1-220ENST00000530567 ZNF646O15015 1829 aaPredicted RBP26.34■■□□□ 1.81
CAPN1-220ENST00000530567 IFIT1P09914 478 aaKnown RBP26.34■■□□□ 1.81
CAPN1-220ENST00000530567 SLC5A1P13866 664 aa26.34■■□□□ 1.81
CAPN1-220ENST00000530567 GYG1P46976 350 aa26.34■■□□□ 1.81
CAPN1-220ENST00000530567 GPR108Q9NPR9 543 aa26.34■■□□□ 1.81
CAPN1-220ENST00000530567 PSME4Q14997 1843 aa26.34■■□□□ 1.81
CAPN1-220ENST00000530567 A0A1B0GUL7 405 aa26.33■■□□□ 1.81
CAPN1-220ENST00000530567 ADORA1P30542 326 aa26.33■■□□□ 1.81
CAPN1-220ENST00000530567 TIMM10P62072 90 aa26.33■■□□□ 1.81
CAPN1-220ENST00000530567 FBXO33Q7Z6M2 555 aa26.33■■□□□ 1.81
CAPN1-220ENST00000530567 RHPN1Q8TCX5 695 aa26.33■■□□□ 1.81
CAPN1-220ENST00000530567 AKAP2Q9Y2D5 859 aa26.33■■□□□ 1.81
CAPN1-220ENST00000530567 RAB11FIP3O75154 756 aa26.32■■□□□ 1.8
CAPN1-220ENST00000530567 TNNI3KQ59H18 835 aa26.32■■□□□ 1.8
CAPN1-220ENST00000530567 CD209Q9NNX6 404 aa26.32■■□□□ 1.8
CAPN1-220ENST00000530567 KCNQ5Q9NR82 932 aa26.32■■□□□ 1.8
CAPN1-220ENST00000530567 FPGT-TNNI3KV9GXZ4 949 aa26.32■■□□□ 1.8
CAPN1-220ENST00000530567 APBB1O00213 710 aa26.31■■□□□ 1.8
CAPN1-220ENST00000530567 CXCL9Q07325 125 aa26.31■■□□□ 1.8
CAPN1-220ENST00000530567 ZNF804AQ7Z570 1209 aa26.31■■□□□ 1.8
CAPN1-220ENST00000530567 PODNQ7Z5L7 613 aa26.31■■□□□ 1.8
CAPN1-220ENST00000530567 KIF1BPQ96EK5 621 aa26.31■■□□□ 1.8
CAPN1-220ENST00000530567 G3V3G9 751 aa26.3■■□□□ 1.8
CAPN1-220ENST00000530567 RAD17O75943 681 aa26.3■■□□□ 1.8
CAPN1-220ENST00000530567 IGHDP01880 384 aa26.3■■□□□ 1.8
CAPN1-220ENST00000530567 IL1R1P14778 569 aa26.3■■□□□ 1.8
CAPN1-220ENST00000530567 HIBADHP31937 336 aaKnown RBP26.3■■□□□ 1.8
CAPN1-220ENST00000530567 BCAMP50895 628 aa26.3■■□□□ 1.8
CAPN1-220ENST00000530567 EIF6P56537 245 aaKnown RBP26.3■■□□□ 1.8
CAPN1-220ENST00000530567 DCAF8Q5TAQ9 597 aa26.3■■□□□ 1.8
CAPN1-220ENST00000530567 EAF2Q96CJ1 260 aaPredicted RBP26.3■■□□□ 1.8
CAPN1-220ENST00000530567 IL1RAPL2Q9NP60 686 aa26.3■■□□□ 1.8
CAPN1-220ENST00000530567 XAGE2Q96GT9 111 aa26.29■■□□□ 1.8
CAPN1-220ENST00000530567 GLTPD2A6NH11 291 aa26.28■■□□□ 1.8
CAPN1-220ENST00000530567 TDRD7Q8NHU6 1098 aaKnown RBP26.28■■□□□ 1.8
CAPN1-220ENST00000530567 DDNO94850 711 aaPredicted RBP26.27■■□□□ 1.8
CAPN1-220ENST00000530567 YY1P25490 414 aa26.27■■□□□ 1.8
CAPN1-220ENST00000530567 PHKA1P46020 1223 aa26.27■■□□□ 1.8
CAPN1-220ENST00000530567 CAVIN4Q5BKX8 364 aa26.27■■□□□ 1.8
CAPN1-220ENST00000530567 CIAPIN1Q6FI81 312 aa26.27■■□□□ 1.8
CAPN1-220ENST00000530567 NEUROD6Q96NK8 337 aa26.27■■□□□ 1.8
CAPN1-220ENST00000530567 DBNDD2Q9BQY9 259 aa26.26■■□□□ 1.79
CAPN1-220ENST00000530567 LRRCC1Q9C099 1032 aa26.26■■□□□ 1.79
CAPN1-220ENST00000530567 RWDD1Q9H446 243 aaPredicted RBP26.26■■□□□ 1.79
CAPN1-220ENST00000530567 TLR7Q9NYK1 1049 aaKnown RBP26.26■■□□□ 1.79
CAPN1-220ENST00000530567 DBNLQ9UJU6 430 aaKnown RBP26.26■■□□□ 1.79
CAPN1-220ENST00000530567 COL1A1P02452 1464 aaPredicted RBP26.26■■□□□ 1.79
CAPN1-220ENST00000530567 PSMD14O00487 310 aa26.25■■□□□ 1.79
CAPN1-220ENST00000530567 CCDC102BQ68D86 513 aa26.25■■□□□ 1.79
CAPN1-220ENST00000530567 GPC2Q8N158 579 aa26.25■■□□□ 1.79
CAPN1-220ENST00000530567 SMARCA5O60264 1052 aaPredicted RBP26.24■■□□□ 1.79
CAPN1-220ENST00000530567 NEFLP07196 543 aa26.24■■□□□ 1.79
CAPN1-220ENST00000530567 AACSQ86V21 672 aa26.24■■□□□ 1.79
CAPN1-220ENST00000530567 VPS37DQ86XT2 251 aa26.24■■□□□ 1.79
CAPN1-220ENST00000530567 SMC5Q8IY18 1101 aa26.24■■□□□ 1.79
CAPN1-220ENST00000530567 CCDC8Q9H0W5 538 aaPredicted RBP26.24■■□□□ 1.79
CAPN1-220ENST00000530567 IQSEC3Q9UPP2 1182 aaPredicted RBP26.24■■□□□ 1.79
CAPN1-220ENST00000530567 WDR90Q96KV7 1748 aa26.24■■□□□ 1.79
CAPN1-220ENST00000530567 USP17L3A6NCW0 530 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 USP17L4A6NCW7 530 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 VIL1P09327 827 aaKnown RBP26.23■■□□□ 1.79
CAPN1-220ENST00000530567 DACT2Q5SW24 774 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 DPY19L2Q6NUT2 758 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 USP17L1Q7RTZ2 530 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 CLASRPQ8N2M8 674 aaKnown RBP26.23■■□□□ 1.79
CAPN1-220ENST00000530567 GCC1Q96CN9 775 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 GJA3Q9Y6H8 435 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 FAM205AQ6ZU69 1335 aa26.23■■□□□ 1.79
CAPN1-220ENST00000530567 ZBTB22O15209 634 aa26.22■■□□□ 1.79
CAPN1-220ENST00000530567 TNIP1Q15025 636 aa26.22■■□□□ 1.79
CAPN1-220ENST00000530567 STRIP1Q5VSL9 837 aa26.22■■□□□ 1.79
CAPN1-220ENST00000530567 MYH13Q9UKX3 1938 aa26.22■■□□□ 1.79
CAPN1-220ENST00000530567 GTF2IP78347 998 aa26.22■■□□□ 1.79
CAPN1-220ENST00000530567 L3MBTL3Q96JM7 780 aaPredicted RBP26.22■■□□□ 1.79
CAPN1-220ENST00000530567 TTLL5Q6EMB2 1281 aa26.21■■□□□ 1.79
CAPN1-220ENST00000530567 MXD3Q9BW11 206 aa26.21■■□□□ 1.79
CAPN1-220ENST00000530567 JAG2Q9Y219 1238 aa26.21■■□□□ 1.79
CAPN1-220ENST00000530567 ZBTB12Q9Y330 459 aaPredicted RBP26.21■■□□□ 1.79
CAPN1-220ENST00000530567 KDM2BQ8NHM5 1336 aa26.2■■□□□ 1.78
CAPN1-220ENST00000530567 ZNF526Q8TF50 670 aaPredicted RBP26.2■■□□□ 1.78
CAPN1-220ENST00000530567 ARID4AP29374 1257 aaPredicted RBP26.19■■□□□ 1.78
CAPN1-220ENST00000530567 GMPSP49915 693 aaPredicted RBP26.19■■□□□ 1.78
CAPN1-220ENST00000530567 SCNN1DP51172 638 aa26.19■■□□□ 1.78
CAPN1-220ENST00000530567 RASGRF1Q13972 1273 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms