RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
TM9SF1-210ENST00000530563 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
TM9SF1-210ENST00000530563 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
TM9SF1-210ENST00000530563 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
TM9SF1-210ENST00000530563 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
TM9SF1-210ENST00000530563 MED23Q9ULK4 1368 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 TTLL12Q14166 644 aaPredicted RBP13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 OTOP1Q7RTM1 612 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 ANKRD18AQ8IVF6 992 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 CCDC146Q8IYE0 955 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 MYD88Q99836 296 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 FZD1Q9UP38 647 aa13.87□□□□□ -0.19
TM9SF1-210ENST00000530563 SASH1O94885 1247 aa13.86□□□□□ -0.19
TM9SF1-210ENST00000530563 ZNF853P0CG23 659 aa13.86□□□□□ -0.19
TM9SF1-210ENST00000530563 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
TM9SF1-210ENST00000530563 CAP1Q01518 475 aa13.86□□□□□ -0.19
TM9SF1-210ENST00000530563 STRIP1Q5VSL9 837 aa13.86□□□□□ -0.19
TM9SF1-210ENST00000530563 KIAA0100Q14667 2235 aaKnown RBP13.86□□□□□ -0.19
TM9SF1-210ENST00000530563 CEP290O15078 2479 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 MMP14P50281 582 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 FXR1P51114 621 aaKnown RBP eCLIP13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 PRKG1Q13976 671 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 MAP3K11Q16584 847 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 INTS3Q68E01 1043 aaKnown RBP13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 ARMC9Q7Z3E5 817 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 TTLL11Q8NHH1 800 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 MBIPQ9NS73 344 aa13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 BSDC1Q9NW68 430 aaPredicted RBP13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
TM9SF1-210ENST00000530563 SSC5DA1L4H1 1573 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 ALDH1A1P00352 501 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 NF2P35240 595 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 CCT4P50991 539 aaKnown RBP13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 INHBEP58166 350 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 OGFOD1Q8N543 542 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 CLMNQ96JQ2 1002 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 TRIM17Q9Y577 477 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
TM9SF1-210ENST00000530563 IGKV5-2P06315 115 aa13.83□□□□□ -0.2
TM9SF1-210ENST00000530563 CTSWP56202 376 aa13.83□□□□□ -0.2
TM9SF1-210ENST00000530563 ARMC5Q96C12 935 aa13.83□□□□□ -0.2
TM9SF1-210ENST00000530563 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
TM9SF1-210ENST00000530563 GREM2Q9H772 168 aa13.83□□□□□ -0.2
TM9SF1-210ENST00000530563 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.2
TM9SF1-210ENST00000530563 PTPN22Q9Y2R2 807 aa13.83□□□□□ -0.2
TM9SF1-210ENST00000530563 LAMB1P07942 1786 aa13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 RBBP6Q7Z6E9 1792 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 MANSC4A6NHS7 340 aaPredicted RBP13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 EN2P19622 333 aaPredicted RBP13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 KLRK1P26718 216 aa13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 TTLL5Q6EMB2 1281 aa13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 APOBEC3FQ8IUX4 373 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 SLC10A4Q96EP9 437 aa13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 WNK4Q96J92 1243 aa13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 DEFB129Q9H1M3 183 aa13.82□□□□□ -0.2
TM9SF1-210ENST00000530563 COL6A3P12111 3177 aa13.81□□□□□ -0.2
TM9SF1-210ENST00000530563 ZBTB48P10074 688 aaPredicted RBP13.81□□□□□ -0.2
TM9SF1-210ENST00000530563 GJA5P36382 358 aa13.81□□□□□ -0.2
TM9SF1-210ENST00000530563 RALBP1Q15311 655 aa13.81□□□□□ -0.2
TM9SF1-210ENST00000530563 KIAA0825Q8IV33 1275 aa13.81□□□□□ -0.2
TM9SF1-210ENST00000530563 PTPN18Q99952 460 aa13.81□□□□□ -0.2
TM9SF1-210ENST00000530563 PCDHAC2Q9Y5I4 1007 aa13.81□□□□□ -0.2
TM9SF1-210ENST00000530563 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 CRHR2Q13324 411 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 CERS5Q8N5B7 392 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 MTMR14Q8NCE2 650 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 CD99L2Q8TCZ2 262 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 LEMD3Q9Y2U8 911 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 AOX1Q06278 1338 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 IRS2Q9Y4H2 1338 aa13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
TM9SF1-210ENST00000530563 TESPA1A2RU30 521 aaPredicted RBP13.79□□□□□ -0.2
TM9SF1-210ENST00000530563 UNCXA6NJT0 531 aa13.79□□□□□ -0.2
TM9SF1-210ENST00000530563 GTF2IP78347 998 aa13.79□□□□□ -0.2
TM9SF1-210ENST00000530563 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
TM9SF1-210ENST00000530563 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
TM9SF1-210ENST00000530563 TRIOBPQ9H2D6 2365 aa13.79□□□□□ -0.2
TM9SF1-210ENST00000530563 H7C1W4 665 aa13.78□□□□□ -0.2
TM9SF1-210ENST00000530563 USP2O75604 605 aaPredicted RBP13.78□□□□□ -0.2
TM9SF1-210ENST00000530563 ERO1AQ96HE7 468 aa13.78□□□□□ -0.2
TM9SF1-210ENST00000530563 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
TM9SF1-210ENST00000530563 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
TM9SF1-210ENST00000530563 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 LAMA3Q16787 3333 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 NBPF12Q5TAG4 269 aaPredicted RBP13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 ZNF333Q96JL9 665 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 EFCC1Q9HA90 598 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms