RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
USP35-207ENST00000530546 ITGB4P16144 1822 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
USP35-207ENST00000530546 ATP6V1AP38606 617 aa13.66□□□□□ -0.22
USP35-207ENST00000530546 TOB2Q14106 344 aaPredicted RBP13.66□□□□□ -0.22
USP35-207ENST00000530546 SPATA31A1Q5TZJ5 1347 aa13.66□□□□□ -0.22
USP35-207ENST00000530546 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
USP35-207ENST00000530546 CTSWP56202 376 aa13.66□□□□□ -0.22
USP35-207ENST00000530546 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
USP35-207ENST00000530546 USPL1Q5W0Q7 1092 aa13.66□□□□□ -0.22
USP35-207ENST00000530546 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
USP35-207ENST00000530546 SYCE3A1L190 88 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 RNF113AO15541 343 aaKnown RBP13.65□□□□□ -0.22
USP35-207ENST00000530546 FIBPO43427 364 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 ATP2B3Q16720 1220 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
USP35-207ENST00000530546 F13A1P00488 732 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 HCLS1P14317 486 aaPredicted RBP13.65□□□□□ -0.22
USP35-207ENST00000530546 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
USP35-207ENST00000530546 ZAP70P43403 619 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 KRT32Q14532 448 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 ANKRD1Q15327 319 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 ZMYM1Q5SVZ6 1142 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 JCADQ9P266 1359 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 MAST3O60307 1309 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 M0R2C6 588 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 Q6ZUG5 572 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 HELBQ8NG08 1087 aaPredicted RBP13.65□□□□□ -0.22
USP35-207ENST00000530546 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
USP35-207ENST00000530546 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 PALLDQ8WX93 1383 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
USP35-207ENST00000530546 STOX1Q6ZVD7 989 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 FERMT3Q86UX7 667 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 MTMR6Q9Y217 621 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 TTLL5Q6EMB2 1281 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
USP35-207ENST00000530546 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
USP35-207ENST00000530546 CRKLP46109 303 aaKnown RBP13.63□□□□□ -0.23
USP35-207ENST00000530546 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.23
USP35-207ENST00000530546 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 RIPOR2Q9Y4F9 1068 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 KCNQ2O43526 872 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 PDE8AO60658 829 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
USP35-207ENST00000530546 SIK1P57059 783 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 DNM1Q05193 864 aaKnown RBP13.63□□□□□ -0.23
USP35-207ENST00000530546 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
USP35-207ENST00000530546 PDCL2Q8N4E4 241 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
USP35-207ENST00000530546 BRF1Q92994 677 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 SPTLC3Q9NUV7 552 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
USP35-207ENST00000530546 ITPK1Q13572 414 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 CHST3Q7LGC8 479 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 FEZ1Q99689 392 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
USP35-207ENST00000530546 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
USP35-207ENST00000530546 KCNQ4P56696 695 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 JAK2O60674 1132 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
USP35-207ENST00000530546 HAND2P61296 217 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 FAM173BQ6P4H8 233 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 FAM184AQ8NB25 1140 aa13.62□□□□□ -0.23
USP35-207ENST00000530546 SYAP1Q96A49 352 aaPredicted RBP13.62□□□□□ -0.23
USP35-207ENST00000530546 SNAP23O00161 211 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 CDC37L1Q7L3B6 337 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 ZNF34Q8IZ26 560 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 DDX11Q96FC9 970 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 FOSBP53539 338 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
USP35-207ENST00000530546 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 BCL2L12Q9HB09 334 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
USP35-207ENST00000530546 ATP6V1DQ9Y5K8 247 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 LRP6O75581 1613 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 SPATA31A5Q5VU36 1347 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 SPATA31A7Q8IWB4 1347 aa13.61□□□□□ -0.23
USP35-207ENST00000530546 PPFIA3O75145 1194 aa13.6□□□□□ -0.23
USP35-207ENST00000530546 RNF214Q8ND24 703 aa13.6□□□□□ -0.23
USP35-207ENST00000530546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP35-207ENST00000530546 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.6□□□□□ -0.23
USP35-207ENST00000530546 PHF14O94880 888 aa13.6□□□□□ -0.23
USP35-207ENST00000530546 MCAMP43121 646 aa13.6□□□□□ -0.23
USP35-207ENST00000530546 ANKRD7Q92527 254 aa13.6□□□□□ -0.23
USP35-207ENST00000530546 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
USP35-207ENST00000530546 DOT1LQ8TEK3 1739 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms