RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 PUM3Q15397 648 aaKnown RBP13.6□□□□□ -0.23
CAPN1-218ENST00000530442 C15orf52Q6ZUT6 534 aaKnown RBP13.6□□□□□ -0.23
CAPN1-218ENST00000530442 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
CAPN1-218ENST00000530442 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
CAPN1-218ENST00000530442 ZC3H12CQ9C0D7 883 aaKnown RBP13.6□□□□□ -0.23
CAPN1-218ENST00000530442 DBNDD1Q9H9R9 158 aa13.6□□□□□ -0.23
CAPN1-218ENST00000530442 ECE2O60344 883 aa13.59□□□□□ -0.23
CAPN1-218ENST00000530442 OS9Q13438 667 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-218ENST00000530442 ATP2B3Q16720 1220 aa13.59□□□□□ -0.23
CAPN1-218ENST00000530442 DOK7Q18PE1 504 aa13.59□□□□□ -0.23
CAPN1-218ENST00000530442 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
CAPN1-218ENST00000530442 CEP126Q9P2H0 1117 aa13.59□□□□□ -0.23
CAPN1-218ENST00000530442 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
CAPN1-218ENST00000530442 COL1A1P02452 1464 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-218ENST00000530442 SLC5A1P13866 664 aa13.57□□□□□ -0.24
CAPN1-218ENST00000530442 GYG1P46976 350 aa13.57□□□□□ -0.24
CAPN1-218ENST00000530442 LPIN2Q92539 896 aa13.57□□□□□ -0.24
CAPN1-218ENST00000530442 SCN4AP35499 1836 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 A0A1B0GUL7 405 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 IFIT1P09914 478 aaKnown RBP13.56□□□□□ -0.24
CAPN1-218ENST00000530442 YY1P25490 414 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 ADORA1P30542 326 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 HDAC1Q13547 482 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-218ENST00000530442 TNNI3KQ59H18 835 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 ERC1Q8IUD2 1116 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 FAM84BQ96KN1 310 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-218ENST00000530442 COA1Q9GZY4 146 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 CD209Q9NNX6 404 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 KCNQ5Q9NR82 932 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 FPGT-TNNI3KV9GXZ4 949 aa13.56□□□□□ -0.24
CAPN1-218ENST00000530442 APBB1O00213 710 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 EIF6P56537 245 aaKnown RBP13.55□□□□□ -0.24
CAPN1-218ENST00000530442 CXCL9Q07325 125 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 HSP90AB4PQ58FF6 505 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 ZNF804AQ7Z570 1209 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 DCTPP1Q9H773 170 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 AKAP2Q9Y2D5 859 aa13.55□□□□□ -0.24
CAPN1-218ENST00000530442 AKAP11Q9UKA4 1901 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 GLTPD2A6NH11 291 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 G3V3G9 751 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 RAD17O75943 681 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 DDNO94850 711 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-218ENST00000530442 IL1R1P14778 569 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
CAPN1-218ENST00000530442 BCAMP50895 628 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 TIMM10P62072 90 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 FBXO33Q7Z6M2 555 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 KIF1BPQ96EK5 621 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
CAPN1-218ENST00000530442 ADAMTSL1Q8N6G6 1762 aa13.53□□□□□ -0.24
CAPN1-218ENST00000530442 PSMD14O00487 310 aa13.53□□□□□ -0.24
CAPN1-218ENST00000530442 PHKA1P46020 1223 aa13.53□□□□□ -0.24
CAPN1-218ENST00000530442 CAVIN4Q5BKX8 364 aa13.53□□□□□ -0.24
CAPN1-218ENST00000530442 CIAPIN1Q6FI81 312 aa13.53□□□□□ -0.24
CAPN1-218ENST00000530442 GPC2Q8N158 579 aa13.53□□□□□ -0.24
CAPN1-218ENST00000530442 TDRD7Q8NHU6 1098 aaKnown RBP13.53□□□□□ -0.24
CAPN1-218ENST00000530442 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-218ENST00000530442 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-218ENST00000530442 XAGE2Q96GT9 111 aa13.53□□□□□ -0.24
CAPN1-218ENST00000530442 TLR7Q9NYK1 1049 aaKnown RBP13.53□□□□□ -0.24
CAPN1-218ENST00000530442 IGHDP01880 384 aa13.52□□□□□ -0.25
CAPN1-218ENST00000530442 CCDC102BQ68D86 513 aa13.52□□□□□ -0.25
CAPN1-218ENST00000530442 VPS37DQ86XT2 251 aa13.52□□□□□ -0.25
CAPN1-218ENST00000530442 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-218ENST00000530442 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
CAPN1-218ENST00000530442 DBNDD2Q9BQY9 259 aa13.52□□□□□ -0.25
CAPN1-218ENST00000530442 DBNLQ9UJU6 430 aaKnown RBP13.52□□□□□ -0.25
CAPN1-218ENST00000530442 IQSEC3Q9UPP2 1182 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-218ENST00000530442 GJA3Q9Y6H8 435 aa13.52□□□□□ -0.25
CAPN1-218ENST00000530442 MAST2Q6P0Q8 1798 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 SMARCA5O60264 1052 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-218ENST00000530442 SCNN1DP51172 638 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 TNIP1Q15025 636 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 DACT2Q5SW24 774 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 AACSQ86V21 672 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 LRRCC1Q9C099 1032 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 CCDC8Q9H0W5 538 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-218ENST00000530442 JAG2Q9Y219 1238 aa13.51□□□□□ -0.25
CAPN1-218ENST00000530442 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-218ENST00000530442 MYO5AQ9Y4I1 1855 aaKnown RBP13.5□□□□□ -0.25
CAPN1-218ENST00000530442 DOCK2Q92608 1830 aa13.5□□□□□ -0.25
CAPN1-218ENST00000530442 FAM205AQ6ZU69 1335 aa13.5□□□□□ -0.25
CAPN1-218ENST00000530442 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
CAPN1-218ENST00000530442 GTF2IP78347 998 aa13.5□□□□□ -0.25
CAPN1-218ENST00000530442 STRIP1Q5VSL9 837 aa13.5□□□□□ -0.25
CAPN1-218ENST00000530442 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-218ENST00000530442 CLASRPQ8N2M8 674 aaKnown RBP13.5□□□□□ -0.25
CAPN1-218ENST00000530442 ZNF784Q8NCA9 323 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-218ENST00000530442 MXD3Q9BW11 206 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms