RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 MRS2Q9HD23 443 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 MYOZ2Q9NPC6 264 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 FANCIQ9NVI1 1328 aa26.57■■□□□ 1.84
TSPAN4-219ENST00000530404 CCT4P50991 539 aaKnown RBP26.56■■□□□ 1.84
TSPAN4-219ENST00000530404 ZNF157P51786 506 aaPredicted RBP26.56■■□□□ 1.84
TSPAN4-219ENST00000530404 PODNQ7Z5L7 613 aa26.56■■□□□ 1.84
TSPAN4-219ENST00000530404 IL16Q14005 1332 aa26.56■■□□□ 1.84
TSPAN4-219ENST00000530404 PAPPA2Q9BXP8 1791 aa26.56■■□□□ 1.84
TSPAN4-219ENST00000530404 CCDC85CA6NKD9 419 aa26.55■■□□□ 1.84
TSPAN4-219ENST00000530404 USP17L8P0C7I0 530 aa26.55■■□□□ 1.84
TSPAN4-219ENST00000530404 FKBP5Q13451 457 aaPredicted RBP26.55■■□□□ 1.84
TSPAN4-219ENST00000530404 GCKRQ14397 625 aa26.55■■□□□ 1.84
TSPAN4-219ENST00000530404 FAM161AQ3B820 660 aa26.54■■□□□ 1.84
TSPAN4-219ENST00000530404 TXNRD3Q86VQ6 643 aa26.54■■□□□ 1.84
TSPAN4-219ENST00000530404 ECM29Q5VYK3 1845 aa26.53■■□□□ 1.84
TSPAN4-219ENST00000530404 ITGA6P23229 1130 aa26.53■■□□□ 1.84
TSPAN4-219ENST00000530404 IGHMBP2P38935 993 aaKnown RBP26.53■■□□□ 1.84
TSPAN4-219ENST00000530404 CASP7P55210 303 aa26.53■■□□□ 1.84
TSPAN4-219ENST00000530404 KIF23Q02241 960 aaPredicted RBP26.53■■□□□ 1.84
TSPAN4-219ENST00000530404 DNAAF4Q8WXU2 420 aa26.53■■□□□ 1.84
TSPAN4-219ENST00000530404 KLRK1P26718 216 aa26.52■■□□□ 1.84
TSPAN4-219ENST00000530404 NBPF9Q3BBW0 867 aa26.51■■□□□ 1.83
TSPAN4-219ENST00000530404 DACT2Q5SW24 774 aa26.51■■□□□ 1.83
TSPAN4-219ENST00000530404 CCDC102AQ96A19 550 aa26.51■■□□□ 1.83
TSPAN4-219ENST00000530404 PLA2G12BQ9BX93 195 aa26.51■■□□□ 1.83
TSPAN4-219ENST00000530404 MCOLN1Q9GZU1 580 aa26.51■■□□□ 1.83
TSPAN4-219ENST00000530404 SLC10A3P09131 477 aa26.5■■□□□ 1.83
TSPAN4-219ENST00000530404 EXOSC9Q06265 439 aaKnown RBP26.5■■□□□ 1.83
TSPAN4-219ENST00000530404 PRAMEF18Q5VWM3 479 aa26.5■■□□□ 1.83
TSPAN4-219ENST00000530404 MYH16Q9H6N6 1097 aa26.5■■□□□ 1.83
TSPAN4-219ENST00000530404 VAMP4O75379 141 aa26.49■■□□□ 1.83
TSPAN4-219ENST00000530404 MOB2Q70IA6 237 aa26.49■■□□□ 1.83
TSPAN4-219ENST00000530404 ZNF804BA4D1E1 1349 aa26.48■■□□□ 1.83
TSPAN4-219ENST00000530404 PITPNM2Q9BZ72 1349 aa26.48■■□□□ 1.83
TSPAN4-219ENST00000530404 DGKZQ13574 1117 aa26.48■■□□□ 1.83
TSPAN4-219ENST00000530404 LINS1Q8NG48 757 aa26.48■■□□□ 1.83
TSPAN4-219ENST00000530404 MPHOSPH8Q99549 860 aa26.48■■□□□ 1.83
TSPAN4-219ENST00000530404 COA1Q9GZY4 146 aa26.48■■□□□ 1.83
TSPAN4-219ENST00000530404 LEMD3Q9Y2U8 911 aa26.48■■□□□ 1.83
TSPAN4-219ENST00000530404 F6X3S4 739 aa26.47■■□□□ 1.83
TSPAN4-219ENST00000530404 CSF1RP07333 972 aa26.47■■□□□ 1.83
TSPAN4-219ENST00000530404 RASAL3Q86YV0 1011 aa26.47■■□□□ 1.83
TSPAN4-219ENST00000530404 SNAP23O00161 211 aa26.46■■□□□ 1.83
TSPAN4-219ENST00000530404 ANP32CO43423 234 aa26.46■■□□□ 1.83
TSPAN4-219ENST00000530404 TRPA1O75762 1119 aa26.46■■□□□ 1.83
TSPAN4-219ENST00000530404 CHRNDQ07001 517 aa26.46■■□□□ 1.83
TSPAN4-219ENST00000530404 SPINK5Q9NQ38 1064 aaPredicted RBP26.46■■□□□ 1.83
TSPAN4-219ENST00000530404 RNF186Q9NXI6 227 aa26.46■■□□□ 1.83
TSPAN4-219ENST00000530404 TNRC18O15417 2968 aaPredicted RBP26.45■■□□□ 1.82
TSPAN4-219ENST00000530404 SASH1O94885 1247 aa26.45■■□□□ 1.82
TSPAN4-219ENST00000530404 NCBP3Q53F19 620 aaKnown RBP26.45■■□□□ 1.82
TSPAN4-219ENST00000530404 STRIP1Q5VSL9 837 aa26.45■■□□□ 1.82
TSPAN4-219ENST00000530404 WDR63Q8IWG1 891 aa26.45■■□□□ 1.82
TSPAN4-219ENST00000530404 CSRNP1Q96S65 589 aa26.45■■□□□ 1.82
TSPAN4-219ENST00000530404 ANKRD2Q9GZV1 360 aa26.45■■□□□ 1.82
TSPAN4-219ENST00000530404 WNT10BO00744 389 aa26.44■■□□□ 1.82
TSPAN4-219ENST00000530404 KCNJ4P48050 445 aa26.44■■□□□ 1.82
TSPAN4-219ENST00000530404 TTLL5Q6EMB2 1281 aa26.44■■□□□ 1.82
TSPAN4-219ENST00000530404 MYO3BQ8WXR4 1341 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 ANKRD18BA2A2Z9 1011 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 TAF5LO75529 589 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 GTF2IP78347 998 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 KIAA0825Q8IV33 1275 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 OGFOD1Q8N543 542 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 HELBQ8NG08 1087 aaPredicted RBP26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 SAGE1Q9NXZ1 904 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 CHMP3Q9Y3E7 222 aa26.43■■□□□ 1.82
TSPAN4-219ENST00000530404 UBE2Q2LH0YL09 131 aa26.42■■□□□ 1.82
TSPAN4-219ENST00000530404 FOXO4P98177 505 aa26.42■■□□□ 1.82
TSPAN4-219ENST00000530404 FKBP1BP68106 108 aa26.4■■□□□ 1.82
TSPAN4-219ENST00000530404 TTLL12Q14166 644 aaPredicted RBP26.4■■□□□ 1.82
TSPAN4-219ENST00000530404 BEND3Q5T5X7 828 aa26.4■■□□□ 1.82
TSPAN4-219ENST00000530404 EPHA10Q5JZY3 1008 aa26.39■■□□□ 1.82
TSPAN4-219ENST00000530404 CD209Q9NNX6 404 aa26.39■■□□□ 1.82
TSPAN4-219ENST00000530404 IRS2Q9Y4H2 1338 aa26.39■■□□□ 1.81
TSPAN4-219ENST00000530404 IFIT5Q13325 482 aaKnown RBP26.38■■□□□ 1.81
TSPAN4-219ENST00000530404 FAM9BQ8IZU0 186 aa26.38■■□□□ 1.81
TSPAN4-219ENST00000530404 ZNF594Q96JF6 807 aaPredicted RBP26.38■■□□□ 1.81
TSPAN4-219ENST00000530404 ZNF316A6NFI3 1004 aaPredicted RBP26.37■■□□□ 1.81
TSPAN4-219ENST00000530404 PRKG1Q13976 671 aa26.37■■□□□ 1.81
TSPAN4-219ENST00000530404 HDAC9Q9UKV0 1011 aa26.37■■□□□ 1.81
TSPAN4-219ENST00000530404 MKRN3Q13064 507 aaKnown RBP26.36■■□□□ 1.81
TSPAN4-219ENST00000530404 LMBR1LQ6UX01 489 aa26.36■■□□□ 1.81
TSPAN4-219ENST00000530404 PCDHAC2Q9Y5I4 1007 aa26.36■■□□□ 1.81
TSPAN4-219ENST00000530404 ARAP2Q8WZ64 1704 aa26.36■■□□□ 1.81
TSPAN4-219ENST00000530404 MLLT1Q03111 559 aaPredicted RBP26.35■■□□□ 1.81
TSPAN4-219ENST00000530404 CERS5Q8N5B7 392 aa26.35■■□□□ 1.81
TSPAN4-219ENST00000530404 JAG2Q9Y219 1238 aa26.35■■□□□ 1.81
TSPAN4-219ENST00000530404 F8W031 263 aaPredicted RBP26.34■■□□□ 1.81
TSPAN4-219ENST00000530404 PLIN1O60240 522 aa26.34■■□□□ 1.81
TSPAN4-219ENST00000530404 RGS19P49795 217 aa26.34■■□□□ 1.81
TSPAN4-219ENST00000530404 ZBED3Q96IU2 234 aaPredicted RBP26.34■■□□□ 1.81
TSPAN4-219ENST00000530404 FZD1Q9UP38 647 aa26.34■■□□□ 1.81
TSPAN4-219ENST00000530404 GRM8O00222 908 aa26.33■■□□□ 1.81
TSPAN4-219ENST00000530404 NF2P35240 595 aa26.33■■□□□ 1.81
TSPAN4-219ENST00000530404 SLC4A10Q6U841 1118 aa26.33■■□□□ 1.81
TSPAN4-219ENST00000530404 APOBEC3FQ8IUX4 373 aaKnown RBP26.33■■□□□ 1.81
TSPAN4-219ENST00000530404 TAF7LQ5H9L4 462 aa26.32■■□□□ 1.8
TSPAN4-219ENST00000530404 LAMB1P07942 1786 aa26.31■■□□□ 1.8
TSPAN4-219ENST00000530404 PTPN12Q05209 780 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms