RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 XRCC5P13010 732 aaKnown RBP6.36□□□□□ -1.39
SVIP-203ENST00000529848 ERCC5P28715 1186 aaPredicted RBP6.36□□□□□ -1.39
SVIP-203ENST00000529848 ATP11AP98196 1134 aa6.36□□□□□ -1.39
SVIP-203ENST00000529848 HDLBPQ00341 1268 aaKnown RBP6.36□□□□□ -1.39
SVIP-203ENST00000529848 TAF1CQ15572 869 aaPredicted RBP6.36□□□□□ -1.39
SVIP-203ENST00000529848 CCNJLQ8IV13 435 aa6.36□□□□□ -1.39
SVIP-203ENST00000529848 GOLGA6L1Q8N7Z2 621 aa6.36□□□□□ -1.39
SVIP-203ENST00000529848 TMEM102Q8N9M5 508 aaPredicted RBP6.36□□□□□ -1.39
SVIP-203ENST00000529848 TCF12Q99081 682 aa6.36□□□□□ -1.39
SVIP-203ENST00000529848 PBX4Q9BYU1 374 aa6.36□□□□□ -1.39
SVIP-203ENST00000529848 ZFYVE1Q9HBF4 777 aa6.36□□□□□ -1.39
SVIP-203ENST00000529848 ABCB6Q9NP58 842 aa6.36□□□□□ -1.39
SVIP-203ENST00000529848 GDF2Q9UK05 429 aaPredicted RBP6.36□□□□□ -1.39
SVIP-203ENST00000529848 USP31Q70CQ4 1352 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
SVIP-203ENST00000529848 ELOA3DA6NLF2 546 aaPredicted RBP6.35□□□□□ -1.39
SVIP-203ENST00000529848 FAM177BA6PVY3 158 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 ALAS2P22557 587 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 ST13P50502 369 aaKnown RBP6.35□□□□□ -1.39
SVIP-203ENST00000529848 FANCCQ00597 558 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 MEI1Q5TIA1 1274 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 C9orf131Q5VYM1 1079 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 CEP135Q66GS9 1140 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 ELMSAN1Q6PJG2 1045 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 ASAP3Q8TDY4 903 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 IRF7Q92985 503 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 PLD4Q96BZ4 506 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 BHLHE41Q9C0J9 482 aaPredicted RBP6.35□□□□□ -1.39
SVIP-203ENST00000529848 KLF15Q9UIH9 416 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 GGA1Q9UJY5 639 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 AKAP2Q9Y2D5 859 aa6.35□□□□□ -1.39
SVIP-203ENST00000529848 NFKBIEO00221 500 aa6.34□□□□□ -1.39
SVIP-203ENST00000529848 GMPRP36959 345 aa6.34□□□□□ -1.39
SVIP-203ENST00000529848 SRSF11Q05519 484 aaKnown RBP6.34□□□□□ -1.39
SVIP-203ENST00000529848 HS2ST1Q7LGA3 356 aa6.34□□□□□ -1.39
SVIP-203ENST00000529848 NXPE3Q969Y0 559 aa6.34□□□□□ -1.39
SVIP-203ENST00000529848 HHIPQ96QV1 700 aa6.34□□□□□ -1.39
SVIP-203ENST00000529848 SMG9Q9H0W8 520 aaKnown RBP6.34□□□□□ -1.39
SVIP-203ENST00000529848 PPM1HQ9ULR3 514 aa6.34□□□□□ -1.39
SVIP-203ENST00000529848 A0A096LPE4 126 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 A0A1W2PPZ6 126 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 METTL12A8MUP2 240 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 GRIA4P48058 902 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 RNFT1Q5M7Z0 435 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 PERM1Q5SV97 790 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 SLCO4C1Q6ZQN7 724 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 NT5DC4Q86YG4 428 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 FRRS1LQ9P0K9 344 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 NAGPAQ9UK23 515 aa6.33□□□□□ -1.4
SVIP-203ENST00000529848 PTPRAP18433 802 aa6.32□□□□□ -1.4
SVIP-203ENST00000529848 ITPKAP23677 461 aa6.32□□□□□ -1.4
SVIP-203ENST00000529848 KRT76Q01546 638 aa6.32□□□□□ -1.4
SVIP-203ENST00000529848 PTPN12Q05209 780 aaKnown RBP6.32□□□□□ -1.4
SVIP-203ENST00000529848 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
SVIP-203ENST00000529848 PSAPL1Q6NUJ1 521 aa6.32□□□□□ -1.4
SVIP-203ENST00000529848 METTL16Q86W50 562 aaKnown RBP6.32□□□□□ -1.4
SVIP-203ENST00000529848 POP1Q99575 1024 aaKnown RBP6.32□□□□□ -1.4
SVIP-203ENST00000529848 LPIN3Q9BQK8 851 aa6.32□□□□□ -1.4
SVIP-203ENST00000529848 GGT7Q9UJ14 662 aa6.32□□□□□ -1.4
SVIP-203ENST00000529848 RGS9O75916 674 aaPredicted RBP6.31□□□□□ -1.4
SVIP-203ENST00000529848 ADAMTS2O95450 1211 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 ZC3H6P61129 1189 aaKnown RBP6.31□□□□□ -1.4
SVIP-203ENST00000529848 CCDC85BQ15834 202 aaPredicted RBP6.31□□□□□ -1.4
SVIP-203ENST00000529848 USP48Q86UV5 1035 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 BSNDQ8WZ55 320 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 MDFIQ99750 246 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 NOC4LQ9BVI4 516 aaKnown RBP6.31□□□□□ -1.4
SVIP-203ENST00000529848 CEP44Q9C0F1 390 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 TGIF2Q9GZN2 237 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 LACRTQ9GZZ8 138 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 ZNF576Q9H609 170 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
SVIP-203ENST00000529848 GPN3Q9UHW5 284 aaPredicted RBP6.31□□□□□ -1.4
SVIP-203ENST00000529848 FBXO24O75426 580 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 EPXP11678 715 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 CABP4P57796 275 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 RPS26P11Q5JNZ5 115 aaPredicted RBP6.3□□□□□ -1.4
SVIP-203ENST00000529848 GDF6Q6KF10 455 aaPredicted RBP6.3□□□□□ -1.4
SVIP-203ENST00000529848 TPTE2Q6XPS3 522 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 ANKRD24Q8TF21 1146 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 NUDT8Q8WV74 236 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 MUC3BQ9H195 1237 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 JPH1Q9HDC5 661 aaPredicted RBP6.3□□□□□ -1.4
SVIP-203ENST00000529848 TRIM33Q9UPN9 1127 aa6.3□□□□□ -1.4
SVIP-203ENST00000529848 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
SVIP-203ENST00000529848 RAD51AP2Q09MP3 1159 aa6.29□□□□□ -1.4
SVIP-203ENST00000529848 KANK3Q6NY19 840 aa6.29□□□□□ -1.4
SVIP-203ENST00000529848 CACTIN-AS1Q8N1I8 211 aa6.29□□□□□ -1.4
SVIP-203ENST00000529848 EDARADDQ8WWZ3 215 aa6.29□□□□□ -1.4
SVIP-203ENST00000529848 TTC9Q92623 222 aa6.29□□□□□ -1.4
SVIP-203ENST00000529848 ACDQ96AP0 544 aa6.29□□□□□ -1.4
SVIP-203ENST00000529848 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
SVIP-203ENST00000529848 WIPF1O43516 503 aa6.28□□□□□ -1.4
SVIP-203ENST00000529848 RLBP1P12271 317 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms