RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 CEP85Q6P2H3 762 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 C3orf67Q6ZVT6 689 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 ZNF804AQ7Z570 1209 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 TICAM2Q86XR7 235 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 TBC1D16Q8TBP0 767 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 SEC31BQ9NQW1 1179 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 ZNRF3Q9ULT6 936 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 MED23Q9ULK4 1368 aa6.55□□□□□ -1.36
PUM1-220ENST00000529846 DLEC1Q9Y238 1755 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 MYO3BQ8WXR4 1341 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 SURF6O75683 361 aaKnown RBP6.54□□□□□ -1.36
PUM1-220ENST00000529846 IGHDP01880 384 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 SLC5A1P13866 664 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
PUM1-220ENST00000529846 RPS12P25398 132 aaKnown RBP6.54□□□□□ -1.36
PUM1-220ENST00000529846 EIF6P56537 245 aaKnown RBP6.54□□□□□ -1.36
PUM1-220ENST00000529846 FKBP1AP62942 108 aaKnown RBP6.54□□□□□ -1.36
PUM1-220ENST00000529846 GPSM2P81274 684 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
PUM1-220ENST00000529846 VPS37DQ86XT2 251 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 NIM1KQ8IY84 436 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 CLASRPQ8N2M8 674 aaKnown RBP6.54□□□□□ -1.36
PUM1-220ENST00000529846 LARGE2Q8N3Y3 721 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 JARID2Q92833 1246 aaPredicted RBP6.54□□□□□ -1.36
PUM1-220ENST00000529846 KIF1BPQ96EK5 621 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 DCTPP1Q9H773 170 aa6.54□□□□□ -1.36
PUM1-220ENST00000529846 PDS5AQ29RF7 1337 aaKnown RBP6.53□□□□□ -1.36
PUM1-220ENST00000529846 IQCA1LA6NCM1 817 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 FZD9O00144 591 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 PPIP5K2O43314 1243 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 UFL1O94874 794 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 SASH1O94885 1247 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 UQCRFS1P1P0C7P4 283 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 HIBADHP31937 336 aaKnown RBP6.53□□□□□ -1.36
PUM1-220ENST00000529846 CCDC158Q5M9N0 1113 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 GPC2Q8N158 579 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 ZGPATQ8N5A5 531 aaKnown RBP6.53□□□□□ -1.36
PUM1-220ENST00000529846 TBC1D22AQ8WUA7 517 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 BBXQ8WY36 941 aaPredicted RBP6.53□□□□□ -1.36
PUM1-220ENST00000529846 FAM212AQ96EL1 285 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 ZNF512BQ96KM6 892 aaPredicted RBP6.53□□□□□ -1.36
PUM1-220ENST00000529846 CCDC85AQ96PX6 553 aaPredicted RBP6.53□□□□□ -1.36
PUM1-220ENST00000529846 MRIQ9BWK5 157 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 SUGT1Q9Y2Z0 365 aa6.53□□□□□ -1.36
PUM1-220ENST00000529846 ANKRD31Q8N7Z5 1873 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 NFKBIEO00221 500 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 IL1R1P14778 569 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 ATP2B3Q16720 1220 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 GORABQ5T7V8 394 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 STRIP1Q5VSL9 837 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 C9orf131Q5VYM1 1079 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 ATG9AQ7Z3C6 839 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 AGBL3Q8NEM8 1001 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 DPF2Q92785 391 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 LRRCC1Q9C099 1032 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 C1orf115Q9H7X2 142 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 RNF181Q9P0P0 153 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 POLLQ9UGP5 575 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 DDX60Q8IY21 1712 aaKnown RBP6.52□□□□□ -1.37
PUM1-220ENST00000529846 ARFGEF1Q9Y6D6 1849 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 SRCAPQ6ZRS2 3230 aa6.52□□□□□ -1.37
PUM1-220ENST00000529846 PNMA6EA0A0J9YXQ4 647 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 USP17L3A6NCW0 530 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 USP17L4A6NCW7 530 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 GLTPD2A6NH11 291 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 IFIT2P09913 472 aaKnown RBP6.51□□□□□ -1.37
PUM1-220ENST00000529846 FGFR2P21802 821 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 NUCB1Q02818 461 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 LRRFIP1Q32MZ4 808 aaKnown RBP6.51□□□□□ -1.37
PUM1-220ENST00000529846 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
PUM1-220ENST00000529846 USP17L1Q7RTZ2 530 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 FBXO33Q7Z6M2 555 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 PNMA8AQ86V59 439 aaPredicted RBP6.51□□□□□ -1.37
PUM1-220ENST00000529846 CERS3Q8IU89 383 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 SLF2Q8IX21 1173 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 SIRT2Q8IXJ6 389 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 OGFOD1Q8N543 542 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 VGLL2Q8N8G2 317 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.51□□□□□ -1.37
PUM1-220ENST00000529846 ZNF594Q96JF6 807 aaPredicted RBP6.51□□□□□ -1.37
PUM1-220ENST00000529846 TSHZ2Q9NRE2 1034 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 ZNF277Q9NRM2 450 aaPredicted RBP6.51□□□□□ -1.37
PUM1-220ENST00000529846 DENND2AQ9ULE3 1009 aa6.51□□□□□ -1.37
PUM1-220ENST00000529846 MAST3O60307 1309 aa6.5□□□□□ -1.37
PUM1-220ENST00000529846 SNED1Q8TER0 1413 aa6.5□□□□□ -1.37
PUM1-220ENST00000529846 KIAA1551Q9HCM1 1747 aa6.5□□□□□ -1.37
PUM1-220ENST00000529846 BRCA1P38398 1863 aaKnown RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 TNRC6CQ9HCJ0 1690 aaKnown RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 ERC2O15083 957 aa6.5□□□□□ -1.37
PUM1-220ENST00000529846 FRAT2O75474 233 aaPredicted RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 VIL1P09327 827 aaKnown RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 LMOD1P29536 600 aaPredicted RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 TTF1Q15361 905 aaPredicted RBP6.5□□□□□ -1.37
PUM1-220ENST00000529846 LRRC24Q50LG9 513 aa6.5□□□□□ -1.37
PUM1-220ENST00000529846 CIAPIN1Q6FI81 312 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms