RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 ATP2B3Q16720 1220 aa21.55■■□□□ 1.04
CLP1-204ENST00000529773 TXNRD3Q86VQ6 643 aa21.55■■□□□ 1.04
CLP1-204ENST00000529773 LARGE2Q8N3Y3 721 aa21.55■■□□□ 1.04
CLP1-204ENST00000529773 ZC3H12CQ9C0D7 883 aaKnown RBP21.55■■□□□ 1.04
CLP1-204ENST00000529773 RNF181Q9P0P0 153 aa21.55■■□□□ 1.04
CLP1-204ENST00000529773 AKAP2Q9Y2D5 859 aa21.55■■□□□ 1.04
CLP1-204ENST00000529773 ZNF646O15015 1829 aaPredicted RBP21.55■■□□□ 1.04
CLP1-204ENST00000529773 PSME4Q14997 1843 aa21.55■■□□□ 1.04
CLP1-204ENST00000529773 FZD9O00144 591 aa21.54■■□□□ 1.04
CLP1-204ENST00000529773 OS9Q13438 667 aaPredicted RBP21.54■■□□□ 1.04
CLP1-204ENST00000529773 RHPN1Q8TCX5 695 aa21.54■■□□□ 1.04
CLP1-204ENST00000529773 KIF1BPQ96EK5 621 aa21.54■■□□□ 1.04
CLP1-204ENST00000529773 NEFLP07196 543 aa21.53■■□□□ 1.04
CLP1-204ENST00000529773 IFIT1P09914 478 aaKnown RBP21.53■■□□□ 1.04
CLP1-204ENST00000529773 SLC5A1P13866 664 aa21.53■■□□□ 1.04
CLP1-204ENST00000529773 NIM1KQ8IY84 436 aa21.53■■□□□ 1.04
CLP1-204ENST00000529773 COA1Q9GZY4 146 aa21.53■■□□□ 1.04
CLP1-204ENST00000529773 A0A1B0GUL7 405 aa21.52■■□□□ 1.04
CLP1-204ENST00000529773 TNNI3KQ59H18 835 aa21.52■■□□□ 1.04
CLP1-204ENST00000529773 FBXO33Q7Z6M2 555 aa21.52■■□□□ 1.04
CLP1-204ENST00000529773 JDP2Q8WYK2 163 aa21.52■■□□□ 1.04
CLP1-204ENST00000529773 GCC1Q96CN9 775 aa21.52■■□□□ 1.04
CLP1-204ENST00000529773 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.04
CLP1-204ENST00000529773 FPGT-TNNI3KV9GXZ4 949 aa21.52■■□□□ 1.04
CLP1-204ENST00000529773 SCN9AQ15858 1988 aa21.51■■□□□ 1.03
CLP1-204ENST00000529773 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
CLP1-204ENST00000529773 ERICH6BQ5W0A0 696 aa21.51■■□□□ 1.03
CLP1-204ENST00000529773 PODNQ7Z5L7 613 aa21.51■■□□□ 1.03
CLP1-204ENST00000529773 SMC5Q8IY18 1101 aa21.51■■□□□ 1.03
CLP1-204ENST00000529773 FAM84BQ96KN1 310 aaPredicted RBP21.51■■□□□ 1.03
CLP1-204ENST00000529773 ZNRF3Q9ULT6 936 aa21.51■■□□□ 1.03
CLP1-204ENST00000529773 YDJCA8MPS7 323 aa21.5■■□□□ 1.03
CLP1-204ENST00000529773 ECE2O60344 883 aa21.5■■□□□ 1.03
CLP1-204ENST00000529773 IL1R1P14778 569 aa21.5■■□□□ 1.03
CLP1-204ENST00000529773 ZNF804AQ7Z570 1209 aa21.5■■□□□ 1.03
CLP1-204ENST00000529773 IGHDP01880 384 aa21.49■■□□□ 1.03
CLP1-204ENST00000529773 EAF2Q96CJ1 260 aaPredicted RBP21.49■■□□□ 1.03
CLP1-204ENST00000529773 LRRCC1Q9C099 1032 aa21.49■■□□□ 1.03
CLP1-204ENST00000529773 DBNDD1Q9H9R9 158 aa21.49■■□□□ 1.03
CLP1-204ENST00000529773 CD209Q9NNX6 404 aa21.49■■□□□ 1.03
CLP1-204ENST00000529773 HIBADHP31937 336 aaKnown RBP21.48■■□□□ 1.03
CLP1-204ENST00000529773 GYG1P46976 350 aa21.48■■□□□ 1.03
CLP1-204ENST00000529773 ADORA1P30542 326 aa21.47■■□□□ 1.03
CLP1-204ENST00000529773 TIMM10P62072 90 aa21.47■■□□□ 1.03
CLP1-204ENST00000529773 DOK7Q18PE1 504 aa21.47■■□□□ 1.03
CLP1-204ENST00000529773 CAVIN4Q5BKX8 364 aa21.47■■□□□ 1.03
CLP1-204ENST00000529773 TDRD7Q8NHU6 1098 aaKnown RBP21.47■■□□□ 1.03
CLP1-204ENST00000529773 XAGE2Q96GT9 111 aa21.47■■□□□ 1.03
CLP1-204ENST00000529773 ZNF541Q9H0D2 1346 aa21.47■■□□□ 1.03
CLP1-204ENST00000529773 CLASRPQ8N2M8 674 aaKnown RBP21.46■■□□□ 1.03
CLP1-204ENST00000529773 IL1RAPL2Q9NP60 686 aa21.46■■□□□ 1.03
CLP1-204ENST00000529773 DBNLQ9UJU6 430 aaKnown RBP21.46■■□□□ 1.03
CLP1-204ENST00000529773 COL1A1P02452 1464 aaPredicted RBP21.45■■□□□ 1.03
CLP1-204ENST00000529773 BCAMP50895 628 aa21.45■■□□□ 1.02
CLP1-204ENST00000529773 CXCL9Q07325 125 aa21.45■■□□□ 1.02
CLP1-204ENST00000529773 PDS5AQ29RF7 1337 aaKnown RBP21.45■■□□□ 1.02
CLP1-204ENST00000529773 WDR90Q96KV7 1748 aa21.44■■□□□ 1.02
CLP1-204ENST00000529773 SEMA3EO15041 775 aa21.44■■□□□ 1.02
CLP1-204ENST00000529773 EIF6P56537 245 aaKnown RBP21.44■■□□□ 1.02
CLP1-204ENST00000529773 CCDC102BQ68D86 513 aa21.44■■□□□ 1.02
CLP1-204ENST00000529773 AACSQ86V21 672 aa21.44■■□□□ 1.02
CLP1-204ENST00000529773 ZNF512BQ96KM6 892 aaPredicted RBP21.44■■□□□ 1.02
CLP1-204ENST00000529773 DBNDD2Q9BQY9 259 aa21.44■■□□□ 1.02
CLP1-204ENST00000529773 FAM205AQ6ZU69 1335 aa21.44■■□□□ 1.02
CLP1-204ENST00000529773 APBB1O00213 710 aa21.43■■□□□ 1.02
CLP1-204ENST00000529773 ARID4AP29374 1257 aaPredicted RBP21.43■■□□□ 1.02
CLP1-204ENST00000529773 PHKA1P46020 1223 aa21.43■■□□□ 1.02
CLP1-204ENST00000529773 GPC2Q8N158 579 aa21.43■■□□□ 1.02
CLP1-204ENST00000529773 NEUROD6Q96NK8 337 aa21.43■■□□□ 1.02
CLP1-204ENST00000529773 TLR7Q9NYK1 1049 aaKnown RBP21.43■■□□□ 1.02
CLP1-204ENST00000529773 KDM2BQ8NHM5 1336 aa21.43■■□□□ 1.02
CLP1-204ENST00000529773 MYH13Q9UKX3 1938 aa21.43■■□□□ 1.02
CLP1-204ENST00000529773 GLTPD2A6NH11 291 aa21.42■■□□□ 1.02
CLP1-204ENST00000529773 G3V3G9 751 aa21.42■■□□□ 1.02
CLP1-204ENST00000529773 DCAF8Q5TAQ9 597 aa21.42■■□□□ 1.02
CLP1-204ENST00000529773 STRIP1Q5VSL9 837 aa21.42■■□□□ 1.02
CLP1-204ENST00000529773 CIAPIN1Q6FI81 312 aa21.42■■□□□ 1.02
CLP1-204ENST00000529773 VPS37DQ86XT2 251 aa21.42■■□□□ 1.02
CLP1-204ENST00000529773 L3MBTL3Q96JM7 780 aaPredicted RBP21.42■■□□□ 1.02
CLP1-204ENST00000529773 USP17L3A6NCW0 530 aa21.41■■□□□ 1.02
CLP1-204ENST00000529773 USP17L4A6NCW7 530 aa21.41■■□□□ 1.02
CLP1-204ENST00000529773 VIL1P09327 827 aaKnown RBP21.41■■□□□ 1.02
CLP1-204ENST00000529773 FKBP1AP62942 108 aaKnown RBP21.41■■□□□ 1.02
CLP1-204ENST00000529773 TNIP1Q15025 636 aa21.41■■□□□ 1.02
CLP1-204ENST00000529773 DACT2Q5SW24 774 aa21.41■■□□□ 1.02
CLP1-204ENST00000529773 USP17L1Q7RTZ2 530 aa21.41■■□□□ 1.02
CLP1-204ENST00000529773 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
CLP1-204ENST00000529773 GNL3LQ9NVN8 582 aaKnown RBP21.41■■□□□ 1.02
CLP1-204ENST00000529773 SALL3Q9BXA9 1300 aa21.4■■□□□ 1.02
CLP1-204ENST00000529773 PSMD14O00487 310 aa21.4■■□□□ 1.02
CLP1-204ENST00000529773 SMARCA5O60264 1052 aaPredicted RBP21.4■■□□□ 1.02
CLP1-204ENST00000529773 RAD17O75943 681 aa21.4■■□□□ 1.02
CLP1-204ENST00000529773 NUCB1Q02818 461 aa21.4■■□□□ 1.02
CLP1-204ENST00000529773 CCDC8Q9H0W5 538 aaPredicted RBP21.4■■□□□ 1.02
CLP1-204ENST00000529773 MYO3BQ8WXR4 1341 aa21.39■■□□□ 1.01
CLP1-204ENST00000529773 IFIT2P09913 472 aaKnown RBP21.39■■□□□ 1.01
CLP1-204ENST00000529773 UQCRFS1P1P0C7P4 283 aa21.39■■□□□ 1.01
CLP1-204ENST00000529773 RPS12P25398 132 aaKnown RBP21.39■■□□□ 1.01
CLP1-204ENST00000529773 RASGRF1Q13972 1273 aa21.39■■□□□ 1.01
CLP1-204ENST00000529773 GMLQ99445 158 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms