RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ZNF804BA4D1E1 1349 aa19.48■□□□□ 0.71
CCDC90B-215ENST00000529745 IRS2Q9Y4H2 1338 aa19.48■□□□□ 0.71
CCDC90B-215ENST00000529745 WTIPA6NIX2 430 aaPredicted RBP19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 CCDC85CA6NKD9 419 aa19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 ANKRD44Q8N8A2 993 aa19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 ZC3H15Q8WU90 426 aaKnown RBP19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 COA1Q9GZY4 146 aa19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 BICC1Q9H694 974 aaKnown RBP19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 KCNQ5Q9NR82 932 aa19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 CNOT7Q9UIV1 285 aaKnown RBP19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 CLEC11AQ9Y240 323 aa19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
CCDC90B-215ENST00000529745 G3V3G9 751 aa19.45■□□□□ 0.7
CCDC90B-215ENST00000529745 DCAF8Q5TAQ9 597 aa19.45■□□□□ 0.7
CCDC90B-215ENST00000529745 LDHAL6AQ6ZMR3 332 aa19.45■□□□□ 0.7
CCDC90B-215ENST00000529745 CNTROBQ8N137 903 aa19.45■□□□□ 0.7
CCDC90B-215ENST00000529745 AGBL3Q8NEM8 1001 aa19.45■□□□□ 0.7
CCDC90B-215ENST00000529745 ZBTB12Q9Y330 459 aaPredicted RBP19.45■□□□□ 0.7
CCDC90B-215ENST00000529745 PDE4DIPQ5VU43 2346 aa19.44■□□□□ 0.7
CCDC90B-215ENST00000529745 H7C1D1 291 aa19.44■□□□□ 0.7
CCDC90B-215ENST00000529745 TXNRD3Q86VQ6 643 aa19.44■□□□□ 0.7
CCDC90B-215ENST00000529745 GMLQ99445 158 aa19.44■□□□□ 0.7
CCDC90B-215ENST00000529745 POLR2AP24928 1970 aaKnown RBP19.44■□□□□ 0.7
CCDC90B-215ENST00000529745 MAP1SQ66K74 1059 aaPredicted RBP19.43■□□□□ 0.7
CCDC90B-215ENST00000529745 INTS3Q68E01 1043 aaKnown RBP19.43■□□□□ 0.7
CCDC90B-215ENST00000529745 RSBN1LQ6PCB5 846 aaPredicted RBP19.43■□□□□ 0.7
CCDC90B-215ENST00000529745 MICALL2Q8IY33 904 aa19.43■□□□□ 0.7
CCDC90B-215ENST00000529745 ZNF594Q96JF6 807 aaPredicted RBP19.43■□□□□ 0.7
CCDC90B-215ENST00000529745 USP17L3A6NCW0 530 aa19.42■□□□□ 0.7
CCDC90B-215ENST00000529745 USP17L4A6NCW7 530 aa19.42■□□□□ 0.7
CCDC90B-215ENST00000529745 HIRAP54198 1017 aaPredicted RBP19.42■□□□□ 0.7
CCDC90B-215ENST00000529745 TAF7LQ5H9L4 462 aa19.42■□□□□ 0.7
CCDC90B-215ENST00000529745 USP17L1Q7RTZ2 530 aa19.42■□□□□ 0.7
CCDC90B-215ENST00000529745 TRPM4Q8TD43 1214 aa19.42■□□□□ 0.7
CCDC90B-215ENST00000529745 RIPOR2Q9Y4F9 1068 aa19.42■□□□□ 0.7
CCDC90B-215ENST00000529745 TMEM88BA6NKF7 163 aa19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 IPO8O15397 1037 aaKnown RBP19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 MMP14P50281 582 aa19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 ZNF280AP59817 542 aaPredicted RBP19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 STRIP1Q5VSL9 837 aa19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 CNNM1Q9NRU3 951 aa19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 ARAP2Q8WZ64 1704 aa19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 MYO3BQ8WXR4 1341 aa19.41■□□□□ 0.7
CCDC90B-215ENST00000529745 SHTN1A0MZ66 631 aa19.4■□□□□ 0.7
CCDC90B-215ENST00000529745 TAF5LO75529 589 aa19.4■□□□□ 0.7
CCDC90B-215ENST00000529745 KLRK1P26718 216 aa19.4■□□□□ 0.7
CCDC90B-215ENST00000529745 UBE4AQ14139 1066 aa19.4■□□□□ 0.7
CCDC90B-215ENST00000529745 DACT2Q5SW24 774 aa19.4■□□□□ 0.7
CCDC90B-215ENST00000529745 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
CCDC90B-215ENST00000529745 MROH5Q6ZUA9 1318 aa19.4■□□□□ 0.7
CCDC90B-215ENST00000529745 UBTFL1P0CB47 393 aaPredicted RBP19.39■□□□□ 0.69
CCDC90B-215ENST00000529745 KCNJ4P48050 445 aa19.39■□□□□ 0.69
CCDC90B-215ENST00000529745 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
CCDC90B-215ENST00000529745 HELBQ8NG08 1087 aaPredicted RBP19.39■□□□□ 0.69
CCDC90B-215ENST00000529745 CD209Q9NNX6 404 aa19.39■□□□□ 0.69
CCDC90B-215ENST00000529745 ECM29Q5VYK3 1845 aa19.39■□□□□ 0.69
CCDC90B-215ENST00000529745 BCAR3O75815 825 aa19.38■□□□□ 0.69
CCDC90B-215ENST00000529745 TRIM27P14373 513 aa19.38■□□□□ 0.69
CCDC90B-215ENST00000529745 IL1R1P14778 569 aa19.38■□□□□ 0.69
CCDC90B-215ENST00000529745 RFX5P48382 616 aaPredicted RBP19.38■□□□□ 0.69
CCDC90B-215ENST00000529745 PUS3Q9BZE2 481 aaKnown RBP19.38■□□□□ 0.69
CCDC90B-215ENST00000529745 SNAP23O00161 211 aa19.37■□□□□ 0.69
CCDC90B-215ENST00000529745 MAP2K1Q02750 393 aaPredicted RBP19.37■□□□□ 0.69
CCDC90B-215ENST00000529745 SAMD7Q7Z3H4 446 aa19.37■□□□□ 0.69
CCDC90B-215ENST00000529745 VGLL2Q8N8G2 317 aa19.37■□□□□ 0.69
CCDC90B-215ENST00000529745 FBXO3Q9UK99 471 aa19.37■□□□□ 0.69
CCDC90B-215ENST00000529745 RASSF10A6NK89 507 aa19.36■□□□□ 0.69
CCDC90B-215ENST00000529745 EGFRP00533 1210 aa19.36■□□□□ 0.69
CCDC90B-215ENST00000529745 CDC37L1Q7L3B6 337 aa19.36■□□□□ 0.69
CCDC90B-215ENST00000529745 ZNF804AQ7Z570 1209 aa19.36■□□□□ 0.69
CCDC90B-215ENST00000529745 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
CCDC90B-215ENST00000529745 MYH13Q9UKX3 1938 aa19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 GNAI3P08754 354 aa19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 USP17L8P0C7I0 530 aa19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 FKBP1AP62942 108 aaKnown RBP19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 PTPN12Q05209 780 aaKnown RBP19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 KIF4BQ2VIQ3 1234 aa19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 TBC1D10BQ4KMP7 808 aaPredicted RBP19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 LRRC24Q50LG9 513 aa19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 TTLL5Q6EMB2 1281 aa19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 MEIS3Q99687 375 aa19.35■□□□□ 0.69
CCDC90B-215ENST00000529745 DEFB115Q30KQ5 88 aa19.34■□□□□ 0.69
CCDC90B-215ENST00000529745 PITPNM2Q9BZ72 1349 aa19.33■□□□□ 0.69
CCDC90B-215ENST00000529745 WDR33Q9C0J8 1336 aaKnown RBP19.33■□□□□ 0.69
CCDC90B-215ENST00000529745 PDE8BO95263 885 aa19.33■□□□□ 0.68
CCDC90B-215ENST00000529745 MTX1Q13505 466 aa19.33■□□□□ 0.68
CCDC90B-215ENST00000529745 CST9Q5W186 159 aa19.33■□□□□ 0.68
CCDC90B-215ENST00000529745 ZKSCAN2Q63HK3 967 aa19.33■□□□□ 0.68
CCDC90B-215ENST00000529745 GLIS2Q9BZE0 524 aaPredicted RBP19.33■□□□□ 0.68
CCDC90B-215ENST00000529745 MYOZ2Q9NPC6 264 aa19.33■□□□□ 0.68
CCDC90B-215ENST00000529745 LRRFIP2Q9Y608 721 aaKnown RBP19.33■□□□□ 0.68
CCDC90B-215ENST00000529745 FAM205AQ6ZU69 1335 aa19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 EYA2O00167 538 aa19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 TRAF5O00463 557 aa19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 PLIN1O60240 522 aa19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 GTF2IP78347 998 aa19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 TDRD7Q8NHU6 1098 aaKnown RBP19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 KLHDC4Q8TBB5 520 aa19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 FRAT1Q92837 279 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-215ENST00000529745 CIAO1O76071 339 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms