RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 CA12O43570 354 aa26.3■■□□□ 1.8
SF3B2-207ENST00000529577 SLC10A3P09131 477 aa26.3■■□□□ 1.8
SF3B2-207ENST00000529577 USP17L8P0C7I0 530 aa26.3■■□□□ 1.8
SF3B2-207ENST00000529577 FLIIQ13045 1269 aa26.3■■□□□ 1.8
SF3B2-207ENST00000529577 NBPF9Q3BBW0 867 aa26.3■■□□□ 1.8
SF3B2-207ENST00000529577 CDC5LQ99459 802 aaKnown RBP26.3■■□□□ 1.8
SF3B2-207ENST00000529577 PLA2G12BQ9BX93 195 aa26.3■■□□□ 1.8
SF3B2-207ENST00000529577 IRS2Q9Y4H2 1338 aa26.3■■□□□ 1.8
SF3B2-207ENST00000529577 G3V3G9 751 aa26.29■■□□□ 1.8
SF3B2-207ENST00000529577 CSF1RP07333 972 aa26.29■■□□□ 1.8
SF3B2-207ENST00000529577 ZNF157P51786 506 aaPredicted RBP26.29■■□□□ 1.8
SF3B2-207ENST00000529577 FAM161AQ3B820 660 aa26.29■■□□□ 1.8
SF3B2-207ENST00000529577 DCAF8Q5TAQ9 597 aa26.29■■□□□ 1.8
SF3B2-207ENST00000529577 PRAMEF18Q5VWM3 479 aa26.29■■□□□ 1.8
SF3B2-207ENST00000529577 SULF1Q8IWU6 871 aa26.29■■□□□ 1.8
SF3B2-207ENST00000529577 IL16Q14005 1332 aa26.29■■□□□ 1.8
SF3B2-207ENST00000529577 PAPPA2Q9BXP8 1791 aa26.28■■□□□ 1.8
SF3B2-207ENST00000529577 CCDC85CA6NKD9 419 aa26.28■■□□□ 1.8
SF3B2-207ENST00000529577 SNAP23O00161 211 aa26.28■■□□□ 1.8
SF3B2-207ENST00000529577 VAMP4O75379 141 aa26.28■■□□□ 1.8
SF3B2-207ENST00000529577 CSRNP1Q96S65 589 aa26.28■■□□□ 1.8
SF3B2-207ENST00000529577 STK31Q9BXU1 1019 aa26.28■■□□□ 1.8
SF3B2-207ENST00000529577 RASAL3Q86YV0 1011 aa26.27■■□□□ 1.8
SF3B2-207ENST00000529577 RNF186Q9NXI6 227 aa26.27■■□□□ 1.8
SF3B2-207ENST00000529577 TNRC18O15417 2968 aaPredicted RBP26.27■■□□□ 1.8
SF3B2-207ENST00000529577 ITGA6P23229 1130 aa26.26■■□□□ 1.79
SF3B2-207ENST00000529577 NEXNQ0ZGT2 675 aa26.26■■□□□ 1.79
SF3B2-207ENST00000529577 RGS19P49795 217 aa26.25■■□□□ 1.79
SF3B2-207ENST00000529577 CCDC102AQ96A19 550 aa26.25■■□□□ 1.79
SF3B2-207ENST00000529577 CACNA1FO60840 1977 aa26.24■■□□□ 1.79
SF3B2-207ENST00000529577 AKAP11Q9UKA4 1901 aa26.24■■□□□ 1.79
SF3B2-207ENST00000529577 PITPNM2Q9BZ72 1349 aa26.24■■□□□ 1.79
SF3B2-207ENST00000529577 FOXO4P98177 505 aa26.24■■□□□ 1.79
SF3B2-207ENST00000529577 NCBP3Q53F19 620 aaKnown RBP26.24■■□□□ 1.79
SF3B2-207ENST00000529577 DNAAF4Q8WXU2 420 aa26.24■■□□□ 1.79
SF3B2-207ENST00000529577 SALL2Q9Y467 1007 aaPredicted RBP26.24■■□□□ 1.79
SF3B2-207ENST00000529577 WNT10BO00744 389 aa26.23■■□□□ 1.79
SF3B2-207ENST00000529577 EXOSC9Q06265 439 aaKnown RBP26.23■■□□□ 1.79
SF3B2-207ENST00000529577 DGKZQ13574 1117 aa26.23■■□□□ 1.79
SF3B2-207ENST00000529577 CHMP4AQ9BY43 222 aa26.23■■□□□ 1.79
SF3B2-207ENST00000529577 ZNF804BA4D1E1 1349 aa26.22■■□□□ 1.79
SF3B2-207ENST00000529577 F6X3S4 739 aa26.22■■□□□ 1.79
SF3B2-207ENST00000529577 TRPA1O75762 1119 aa26.22■■□□□ 1.79
SF3B2-207ENST00000529577 EPHA10Q5JZY3 1008 aa26.22■■□□□ 1.79
SF3B2-207ENST00000529577 STRIP1Q5VSL9 837 aa26.22■■□□□ 1.79
SF3B2-207ENST00000529577 ZBED3Q96IU2 234 aaPredicted RBP26.22■■□□□ 1.79
SF3B2-207ENST00000529577 COA1Q9GZY4 146 aa26.22■■□□□ 1.79
SF3B2-207ENST00000529577 UBE2Q2LH0YL09 131 aa26.21■■□□□ 1.79
SF3B2-207ENST00000529577 SASH1O94885 1247 aa26.21■■□□□ 1.79
SF3B2-207ENST00000529577 FKBP5Q13451 457 aaPredicted RBP26.21■■□□□ 1.79
SF3B2-207ENST00000529577 LINS1Q8NG48 757 aa26.21■■□□□ 1.79
SF3B2-207ENST00000529577 SAGE1Q9NXZ1 904 aa26.21■■□□□ 1.79
SF3B2-207ENST00000529577 LEMD3Q9Y2U8 911 aa26.21■■□□□ 1.79
SF3B2-207ENST00000529577 CHRNDQ07001 517 aa26.2■■□□□ 1.78
SF3B2-207ENST00000529577 CERS5Q8N5B7 392 aa26.2■■□□□ 1.78
SF3B2-207ENST00000529577 MRS2Q9HD23 443 aa26.2■■□□□ 1.78
SF3B2-207ENST00000529577 PCDHAC2Q9Y5I4 1007 aa26.2■■□□□ 1.78
SF3B2-207ENST00000529577 IGHMBP2P38935 993 aaKnown RBP26.19■■□□□ 1.78
SF3B2-207ENST00000529577 BEND3Q5T5X7 828 aa26.19■■□□□ 1.78
SF3B2-207ENST00000529577 AOX1Q06278 1338 aa26.18■■□□□ 1.78
SF3B2-207ENST00000529577 TAF5LO75529 589 aa26.18■■□□□ 1.78
SF3B2-207ENST00000529577 HELBQ8NG08 1087 aaPredicted RBP26.18■■□□□ 1.78
SF3B2-207ENST00000529577 FBXW7Q969H0 707 aa26.18■■□□□ 1.78
SF3B2-207ENST00000529577 WDR63Q8IWG1 891 aa26.17■■□□□ 1.78
SF3B2-207ENST00000529577 FKBP1BP68106 108 aa26.16■■□□□ 1.78
SF3B2-207ENST00000529577 GTF2IP78347 998 aa26.16■■□□□ 1.78
SF3B2-207ENST00000529577 TTLL5Q6EMB2 1281 aa26.16■■□□□ 1.78
SF3B2-207ENST00000529577 KIAA0825Q8IV33 1275 aa26.16■■□□□ 1.78
SF3B2-207ENST00000529577 CD209Q9NNX6 404 aa26.16■■□□□ 1.78
SF3B2-207ENST00000529577 FZD1Q9UP38 647 aa26.16■■□□□ 1.78
SF3B2-207ENST00000529577 ANKRD2Q9GZV1 360 aa26.15■■□□□ 1.78
SF3B2-207ENST00000529577 SSC5DA1L4H1 1573 aa26.15■■□□□ 1.78
SF3B2-207ENST00000529577 ZNF594Q96JF6 807 aaPredicted RBP26.14■■□□□ 1.78
SF3B2-207ENST00000529577 MYH16Q9H6N6 1097 aa26.14■■□□□ 1.78
SF3B2-207ENST00000529577 MYO3BQ8WXR4 1341 aa26.14■■□□□ 1.77
SF3B2-207ENST00000529577 MPHOSPH8Q99549 860 aa26.13■■□□□ 1.77
SF3B2-207ENST00000529577 C15orf52Q6ZUT6 534 aaKnown RBP26.12■■□□□ 1.77
SF3B2-207ENST00000529577 KAZALD1Q96I82 304 aa26.12■■□□□ 1.77
SF3B2-207ENST00000529577 ECM29Q5VYK3 1845 aa26.11■■□□□ 1.77
SF3B2-207ENST00000529577 ANKRD18BA2A2Z9 1011 aa26.11■■□□□ 1.77
SF3B2-207ENST00000529577 MLLT1Q03111 559 aaPredicted RBP26.11■■□□□ 1.77
SF3B2-207ENST00000529577 PTPN12Q05209 780 aaKnown RBP26.11■■□□□ 1.77
SF3B2-207ENST00000529577 LMBR1LQ6UX01 489 aa26.1■■□□□ 1.77
SF3B2-207ENST00000529577 OGFOD1Q8N543 542 aa26.1■■□□□ 1.77
SF3B2-207ENST00000529577 R3HDMLQ9H3Y0 253 aa26.1■■□□□ 1.77
SF3B2-207ENST00000529577 MKRN3Q13064 507 aaKnown RBP26.09■■□□□ 1.77
SF3B2-207ENST00000529577 PRKG1Q13976 671 aa26.09■■□□□ 1.77
SF3B2-207ENST00000529577 JAG2Q9Y219 1238 aa26.09■■□□□ 1.77
SF3B2-207ENST00000529577 TBC1D8O95759 1140 aa26.08■■□□□ 1.77
SF3B2-207ENST00000529577 IL1R1P14778 569 aa26.08■■□□□ 1.77
SF3B2-207ENST00000529577 LDLRAD1Q5T700 205 aa26.08■■□□□ 1.77
SF3B2-207ENST00000529577 TM4SF4P48230 202 aa26.07■■□□□ 1.76
SF3B2-207ENST00000529577 LAMB1P07942 1786 aa26.06■■□□□ 1.76
SF3B2-207ENST00000529577 GRM8O00222 908 aa26.06■■□□□ 1.76
SF3B2-207ENST00000529577 IFIT5Q13325 482 aaKnown RBP26.06■■□□□ 1.76
SF3B2-207ENST00000529577 ZNF521Q96K83 1311 aa26.06■■□□□ 1.76
SF3B2-207ENST00000529577 HTTP42858 3142 aa26.05■■□□□ 1.76
SF3B2-207ENST00000529577 KCNJ4P48050 445 aa26.05■■□□□ 1.76
SF3B2-207ENST00000529577 MTMR14Q8NCE2 650 aa26.05■■□□□ 1.76
SF3B2-207ENST00000529577 PRMT6Q96LA8 375 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms