RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 MED23Q9ULK4 1368 aa15.5■□□□□ 0.07
USH1C-208ENST00000529563 SCN9AQ15858 1988 aa15.5■□□□□ 0.07
USH1C-208ENST00000529563 TRPA1O75762 1119 aa15.5■□□□□ 0.07
USH1C-208ENST00000529563 NF2P35240 595 aa15.5■□□□□ 0.07
USH1C-208ENST00000529563 MLLT1Q03111 559 aaPredicted RBP15.5■□□□□ 0.07
USH1C-208ENST00000529563 WWC1Q8IX03 1113 aa15.5■□□□□ 0.07
USH1C-208ENST00000529563 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
USH1C-208ENST00000529563 MYO3BQ8WXR4 1341 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 FAM155AB1AL88 458 aaPredicted RBP15.49■□□□□ 0.07
USH1C-208ENST00000529563 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 ANKRD2Q9GZV1 360 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 COA1Q9GZY4 146 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 SAGE1Q9NXZ1 904 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 LEMD3Q9Y2U8 911 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 CHMP3Q9Y3E7 222 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
USH1C-208ENST00000529563 PITPNM2Q9BZ72 1349 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 SPEF2Q9C093 1822 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 SLC10A3P09131 477 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 ITGA6P23229 1130 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 FKBP1BP68106 108 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 FLIIQ13045 1269 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 G2E3Q7L622 706 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 DNAAF4Q8WXU2 420 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
USH1C-208ENST00000529563 SCAF8Q9UPN6 1271 aaKnown RBP15.48■□□□□ 0.07
USH1C-208ENST00000529563 IL16Q14005 1332 aa15.47■□□□□ 0.07
USH1C-208ENST00000529563 H7C1W4 665 aa15.47■□□□□ 0.07
USH1C-208ENST00000529563 GCKRQ14397 625 aa15.47■□□□□ 0.07
USH1C-208ENST00000529563 REM2Q8IYK8 340 aaPredicted RBP15.47■□□□□ 0.07
USH1C-208ENST00000529563 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
USH1C-208ENST00000529563 RNF186Q9NXI6 227 aa15.47■□□□□ 0.07
USH1C-208ENST00000529563 MYH3P11055 1940 aa15.47■□□□□ 0.07
USH1C-208ENST00000529563 ZNF804BA4D1E1 1349 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 ZNF609O15014 1411 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 ANKRD18BA2A2Z9 1011 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 WTIPA6NIX2 430 aaPredicted RBP15.46■□□□□ 0.07
USH1C-208ENST00000529563 NBPF9Q3BBW0 867 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 CCDC184Q52MB2 194 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 STRIP1Q5VSL9 837 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 TTLL5Q6EMB2 1281 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 RASAL3Q86YV0 1011 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 GMLQ99445 158 aa15.46■□□□□ 0.07
USH1C-208ENST00000529563 UBE2Q2LH0YL09 131 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 SASH1O94885 1247 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 TAF7LQ5H9L4 462 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 DACT2Q5SW24 774 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 KIAA0825Q8IV33 1275 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 LINS1Q8NG48 757 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 CSRNP1Q96S65 589 aa15.45■□□□□ 0.06
USH1C-208ENST00000529563 FANCIQ9NVI1 1328 aa15.44■□□□□ 0.06
USH1C-208ENST00000529563 MMP14P50281 582 aa15.44■□□□□ 0.06
USH1C-208ENST00000529563 GTF2IP78347 998 aa15.44■□□□□ 0.06
USH1C-208ENST00000529563 PLA2G12BQ9BX93 195 aa15.44■□□□□ 0.06
USH1C-208ENST00000529563 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
USH1C-208ENST00000529563 PSME4Q14997 1843 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 WNT10BO00744 389 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 CHRNDQ07001 517 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 IFIT5Q13325 482 aaKnown RBP15.43■□□□□ 0.06
USH1C-208ENST00000529563 PRKG1Q13976 671 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 MOB2Q70IA6 237 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 ARMC9Q7Z3E5 817 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 TXNRD3Q86VQ6 643 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 APOBEC3FQ8IUX4 373 aaKnown RBP15.43■□□□□ 0.06
USH1C-208ENST00000529563 PAPPA2Q9BXP8 1791 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 AKAP11Q9UKA4 1901 aa15.43■□□□□ 0.06
USH1C-208ENST00000529563 EXOSC9Q06265 439 aaKnown RBP15.42■□□□□ 0.06
USH1C-208ENST00000529563 MKRN3Q13064 507 aaKnown RBP15.42■□□□□ 0.06
USH1C-208ENST00000529563 PLIN1O60240 522 aa15.41■□□□□ 0.06
USH1C-208ENST00000529563 TAF5LO75529 589 aa15.41■□□□□ 0.06
USH1C-208ENST00000529563 KLRK1P26718 216 aa15.41■□□□□ 0.06
USH1C-208ENST00000529563 DLGAP5Q15398 846 aa15.41■□□□□ 0.06
USH1C-208ENST00000529563 ZNF804AQ7Z570 1209 aa15.41■□□□□ 0.06
USH1C-208ENST00000529563 CTU1Q7Z7A3 348 aaKnown RBP15.41■□□□□ 0.06
USH1C-208ENST00000529563 WDR63Q8IWG1 891 aa15.41■□□□□ 0.06
USH1C-208ENST00000529563 HELBQ8NG08 1087 aaPredicted RBP15.41■□□□□ 0.06
USH1C-208ENST00000529563 F8W031 263 aaPredicted RBP15.4■□□□□ 0.06
USH1C-208ENST00000529563 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
USH1C-208ENST00000529563 MYO1BO43795 1136 aa15.4■□□□□ 0.06
USH1C-208ENST00000529563 CSF1RP07333 972 aa15.4■□□□□ 0.06
USH1C-208ENST00000529563 RGS19P49795 217 aa15.4■□□□□ 0.06
USH1C-208ENST00000529563 CCDC57Q2TAC2 916 aa15.4■□□□□ 0.06
USH1C-208ENST00000529563 CD209Q9NNX6 404 aa15.4■□□□□ 0.06
USH1C-208ENST00000529563 CNNM1Q9NRU3 951 aa15.4■□□□□ 0.06
USH1C-208ENST00000529563 C9orf78Q9NZ63 289 aaPredicted RBP15.4■□□□□ 0.06
USH1C-208ENST00000529563 F6X3S4 739 aa15.39■□□□□ 0.05
USH1C-208ENST00000529563 VAMP4O75379 141 aa15.39■□□□□ 0.05
USH1C-208ENST00000529563 RBM5P52756 815 aaKnown RBP eCLIP15.39■□□□□ 0.05
USH1C-208ENST00000529563 SREBF2Q12772 1141 aa15.39■□□□□ 0.05
USH1C-208ENST00000529563 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
USH1C-208ENST00000529563 SLC4A10Q6U841 1118 aa15.39■□□□□ 0.05
USH1C-208ENST00000529563 TBC1D8O95759 1140 aa15.38■□□□□ 0.05
USH1C-208ENST00000529563 CASP7P55210 303 aa15.38■□□□□ 0.05
USH1C-208ENST00000529563 SOX10P56693 466 aa15.38■□□□□ 0.05
USH1C-208ENST00000529563 ANGEL1Q9UNK9 670 aaKnown RBP15.38■□□□□ 0.05
USH1C-208ENST00000529563 LMBR1LQ6UX01 489 aa15.37■□□□□ 0.05
USH1C-208ENST00000529563 LDHAL6AQ6ZMR3 332 aa15.37■□□□□ 0.05
USH1C-208ENST00000529563 VEZTQ9HBM0 779 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms