RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 STRIP1Q5VSL9 837 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 SEC31BQ9NQW1 1179 aa15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 ANGEL1Q9UNK9 670 aaKnown RBP15.19■□□□□ 0.02
AMBRA1-207ENST00000529553 IGF2BP3O00425 579 aaKnown RBP eCLIP15.18■□□□□ 0.02
AMBRA1-207ENST00000529553 SP3Q02447 781 aa15.18■□□□□ 0.02
AMBRA1-207ENST00000529553 RTL5Q5HYW3 569 aaPredicted RBP15.18■□□□□ 0.02
AMBRA1-207ENST00000529553 CD99L2Q8TCZ2 262 aa15.18■□□□□ 0.02
AMBRA1-207ENST00000529553 ZNF333Q96JL9 665 aa15.18■□□□□ 0.02
AMBRA1-207ENST00000529553 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
AMBRA1-207ENST00000529553 PPP1R12BO60237 982 aaPredicted RBP15.17■□□□□ 0.02
AMBRA1-207ENST00000529553 HOXB7P09629 217 aa15.17■□□□□ 0.02
AMBRA1-207ENST00000529553 RIPK4P57078 832 aa15.17■□□□□ 0.02
AMBRA1-207ENST00000529553 PRKG1Q13976 671 aa15.17■□□□□ 0.02
AMBRA1-207ENST00000529553 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
AMBRA1-207ENST00000529553 HYPKQ9NX55 129 aa15.17■□□□□ 0.02
AMBRA1-207ENST00000529553 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
AMBRA1-207ENST00000529553 TESPA1A2RU30 521 aaPredicted RBP15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 H0YGN5 161 aa15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 ANKRD18AQ8IVF6 992 aa15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 ZBED3Q96IU2 234 aaPredicted RBP15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 WNK4Q96J92 1243 aa15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 COA1Q9GZY4 146 aa15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 PPP2R3BQ9Y5P8 575 aa15.16■□□□□ 0.02
AMBRA1-207ENST00000529553 MED23Q9ULK4 1368 aa15.15■□□□□ 0.02
AMBRA1-207ENST00000529553 CHL1O00533 1208 aa15.15■□□□□ 0.02
AMBRA1-207ENST00000529553 PDE8AO60658 829 aa15.15■□□□□ 0.02
AMBRA1-207ENST00000529553 CRHR2Q13324 411 aa15.15■□□□□ 0.02
AMBRA1-207ENST00000529553 DEFB129Q9H1M3 183 aa15.15■□□□□ 0.02
AMBRA1-207ENST00000529553 RBBP6Q7Z6E9 1792 aaKnown RBP15.15■□□□□ 0.02
AMBRA1-207ENST00000529553 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
AMBRA1-207ENST00000529553 COL1A1P02452 1464 aaPredicted RBP15.14■□□□□ 0.01
AMBRA1-207ENST00000529553 COL4A1P02462 1669 aa15.14■□□□□ 0.01
AMBRA1-207ENST00000529553 SLC4A8Q2Y0W8 1093 aa15.14■□□□□ 0.01
AMBRA1-207ENST00000529553 SUPT20HL1Q3ZLR7 823 aa15.14■□□□□ 0.01
AMBRA1-207ENST00000529553 HDGFL1Q5TGJ6 251 aa15.14■□□□□ 0.01
AMBRA1-207ENST00000529553 CENPFP49454 3210 aa15.14■□□□□ 0.01
AMBRA1-207ENST00000529553 SZT2Q5T011 3432 aa15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 SASH1O94885 1247 aa15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 SLC9C1Q4G0N8 1177 aa15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 MXD3Q9BW11 206 aa15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 BSDC1Q9NW68 430 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 BRCA2P51587 3418 aa15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 DLG5Q8TDM6 1919 aa15.13■□□□□ 0.01
AMBRA1-207ENST00000529553 TTLL5Q6EMB2 1281 aa15.12■□□□□ 0.01
AMBRA1-207ENST00000529553 MTMR14Q8NCE2 650 aa15.12■□□□□ 0.01
AMBRA1-207ENST00000529553 CLMNQ96JQ2 1002 aa15.12■□□□□ 0.01
AMBRA1-207ENST00000529553 CDC5LQ99459 802 aaKnown RBP15.12■□□□□ 0.01
AMBRA1-207ENST00000529553 MINPP1Q9UNW1 487 aa15.12■□□□□ 0.01
AMBRA1-207ENST00000529553 IREB2P48200 963 aaKnown RBP15.11■□□□□ 0.01
AMBRA1-207ENST00000529553 CCT4P50991 539 aaKnown RBP15.11■□□□□ 0.01
AMBRA1-207ENST00000529553 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
AMBRA1-207ENST00000529553 RIC3Q7Z5B4 369 aa15.11■□□□□ 0.01
AMBRA1-207ENST00000529553 PTPN18Q99952 460 aa15.11■□□□□ 0.01
AMBRA1-207ENST00000529553 LEMD3Q9Y2U8 911 aa15.11■□□□□ 0.01
AMBRA1-207ENST00000529553 PSME4Q14997 1843 aa15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 DLGAP5Q15398 846 aa15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 ANKRD13AQ8IZ07 590 aa15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 FZD1Q9UP38 647 aa15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 PTCH2Q9Y6C5 1203 aa15.1■□□□□ 0.01
AMBRA1-207ENST00000529553 WTIPA6NIX2 430 aaPredicted RBP15.09■□□□□ 0.01
AMBRA1-207ENST00000529553 USP2O75604 605 aaPredicted RBP15.09■□□□□ 0.01
AMBRA1-207ENST00000529553 CAP1Q01518 475 aa15.09■□□□□ 0.01
AMBRA1-207ENST00000529553 GOLGA2Q08379 1002 aa15.09■□□□□ 0.01
AMBRA1-207ENST00000529553 KIAA0825Q8IV33 1275 aa15.09■□□□□ 0.01
AMBRA1-207ENST00000529553 ZFYVE28Q9HCC9 887 aa15.09■□□□□ 0.01
AMBRA1-207ENST00000529553 GNRH1P01148 92 aa15.08■□□□□ 0
AMBRA1-207ENST00000529553 GJA5P36382 358 aa15.08■□□□□ 0
AMBRA1-207ENST00000529553 PRMT2P55345 433 aa15.08■□□□□ 0
AMBRA1-207ENST00000529553 MS4A4AQ96JQ5 239 aa15.08■□□□□ 0
AMBRA1-207ENST00000529553 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
AMBRA1-207ENST00000529553 TRIOBPQ9H2D6 2365 aa15.08■□□□□ 0
AMBRA1-207ENST00000529553 ZNF804BA4D1E1 1349 aa15.08■□□□□ 0
AMBRA1-207ENST00000529553 MYO1BO43795 1136 aa15.07■□□□□ 0
AMBRA1-207ENST00000529553 DPF3Q92784 378 aa15.07■□□□□ 0
AMBRA1-207ENST00000529553 CCDC85AQ96PX6 553 aaPredicted RBP15.07■□□□□ 0
AMBRA1-207ENST00000529553 MYD88Q99836 296 aa15.07■□□□□ 0
AMBRA1-207ENST00000529553 PRO3102Q9H379 93 aa15.07■□□□□ 0
AMBRA1-207ENST00000529553 A0A1W2PPC1 479 aa15.06■□□□□ 0
AMBRA1-207ENST00000529553 WDHD1O75717 1129 aaPredicted RBP15.06■□□□□ 0
AMBRA1-207ENST00000529553 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
AMBRA1-207ENST00000529553 GTF2IP78347 998 aa15.06■□□□□ 0
AMBRA1-207ENST00000529553 TXNRD3Q86VQ6 643 aa15.06■□□□□ 0
AMBRA1-207ENST00000529553 TTLL11Q8NHH1 800 aa15.06■□□□□ 0
AMBRA1-207ENST00000529553 NKX2-3Q8TAU0 364 aa15.06■□□□□ 0
AMBRA1-207ENST00000529553 ANKRD2Q9GZV1 360 aa15.06■□□□□ 0
AMBRA1-207ENST00000529553 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.06■□□□□ 0
AMBRA1-207ENST00000529553 GTF2A2P52657 109 aa15.05■□□□□ -0
AMBRA1-207ENST00000529553 CTSWP56202 376 aa15.05■□□□□ -0
AMBRA1-207ENST00000529553 KIF22Q14807 665 aa15.05■□□□□ -0
AMBRA1-207ENST00000529553 NBPF12Q5TAG4 269 aaPredicted RBP15.05■□□□□ -0
AMBRA1-207ENST00000529553 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms