RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 HMGB1P09429 215 aaKnown RBP14.02□□□□□ -0.16
CLP1-203ENST00000529430 IFIT1P09914 478 aaKnown RBP14.02□□□□□ -0.16
CLP1-203ENST00000529430 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.16
CLP1-203ENST00000529430 DDX46Q7L014 1031 aaKnown RBP14.02□□□□□ -0.16
CLP1-203ENST00000529430 USP48Q86UV5 1035 aa14.02□□□□□ -0.16
CLP1-203ENST00000529430 NEK1Q96PY6 1258 aa14.02□□□□□ -0.16
CLP1-203ENST00000529430 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.16
CLP1-203ENST00000529430 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.16
CLP1-203ENST00000529430 BRWD3Q6RI45 1802 aa14.02□□□□□ -0.16
CLP1-203ENST00000529430 COL5A3P25940 1745 aaPredicted RBP14.02□□□□□ -0.17
CLP1-203ENST00000529430 A0A1B0GUL7 405 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 LETM1O95202 739 aaPredicted RBP14.01□□□□□ -0.17
CLP1-203ENST00000529430 APBA3O96018 575 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 TAF7LQ5H9L4 462 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 ZNF34Q8IZ26 560 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 LARP6Q9BRS8 491 aaKnown RBP14.01□□□□□ -0.17
CLP1-203ENST00000529430 TMEM63CQ9P1W3 806 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 TPCN1Q9ULQ1 816 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 RREB1Q92766 1687 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 GOLIM4O00461 696 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 ADRA2BP18089 450 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 TIMM10P62072 90 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 IFIT5Q13325 482 aaKnown RBP14.01□□□□□ -0.17
CLP1-203ENST00000529430 TRAPPC3LQ5T215 181 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 PDLIM2Q96JY6 352 aa14.01□□□□□ -0.17
CLP1-203ENST00000529430 RBM27Q9P2N5 1060 aaKnown RBP14.01□□□□□ -0.17
CLP1-203ENST00000529430 NIP7Q9Y221 180 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLP1-203ENST00000529430 PLSCR1O15162 318 aa14□□□□□ -0.17
CLP1-203ENST00000529430 MCM5P33992 734 aa14□□□□□ -0.17
CLP1-203ENST00000529430 RFC4P35249 363 aa14□□□□□ -0.17
CLP1-203ENST00000529430 UBE2HP62256 183 aa14□□□□□ -0.17
CLP1-203ENST00000529430 ZMYM1Q5SVZ6 1142 aa14□□□□□ -0.17
CLP1-203ENST00000529430 GORABQ5T7V8 394 aa14□□□□□ -0.17
CLP1-203ENST00000529430 CHMP4CQ96CF2 233 aa14□□□□□ -0.17
CLP1-203ENST00000529430 FAM89AQ96GI7 184 aa14□□□□□ -0.17
CLP1-203ENST00000529430 ZNF594Q96JF6 807 aaPredicted RBP14□□□□□ -0.17
CLP1-203ENST00000529430 UTP14AQ9BVJ6 771 aaKnown RBP14□□□□□ -0.17
CLP1-203ENST00000529430 NARFQ9UHQ1 456 aa14□□□□□ -0.17
CLP1-203ENST00000529430 MTMR6Q9Y217 621 aa14□□□□□ -0.17
CLP1-203ENST00000529430 LY75O60449 1722 aa14□□□□□ -0.17
CLP1-203ENST00000529430 ABCC12Q96J65 1359 aa13.99□□□□□ -0.17
CLP1-203ENST00000529430 RNF113AO15541 343 aaKnown RBP13.99□□□□□ -0.17
CLP1-203ENST00000529430 ZFYP08048 801 aaPredicted RBP13.99□□□□□ -0.17
CLP1-203ENST00000529430 TXNRD1Q16881 649 aa13.99□□□□□ -0.17
CLP1-203ENST00000529430 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
CLP1-203ENST00000529430 CHAMP1Q96JM3 812 aa13.99□□□□□ -0.17
CLP1-203ENST00000529430 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
CLP1-203ENST00000529430 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
CLP1-203ENST00000529430 TTC39AQ5SRH9 613 aa13.99□□□□□ -0.17
CLP1-203ENST00000529430 LRRC4BQ9NT99 713 aa13.99□□□□□ -0.17
CLP1-203ENST00000529430 NOL7Q9UMY1 257 aaKnown RBP13.99□□□□□ -0.17
CLP1-203ENST00000529430 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
CLP1-203ENST00000529430 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
CLP1-203ENST00000529430 ST3GAL1Q11201 340 aa13.98□□□□□ -0.17
CLP1-203ENST00000529430 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
CLP1-203ENST00000529430 PUS3Q9BZE2 481 aaKnown RBP13.98□□□□□ -0.17
CLP1-203ENST00000529430 NSFL1CQ9UNZ2 370 aaKnown RBP13.98□□□□□ -0.17
CLP1-203ENST00000529430 MYH14Q7Z406 1995 aaKnown RBP13.97□□□□□ -0.17
CLP1-203ENST00000529430 SYCE3A1L190 88 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 CYP21A2P08686 494 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 CCDC183Q5T5S1 534 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
CLP1-203ENST00000529430 CTNNA3Q9UI47 895 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 NDUFB9Q9Y6M9 179 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 UBN2Q6ZU65 1347 aa13.97□□□□□ -0.17
CLP1-203ENST00000529430 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
CLP1-203ENST00000529430 PDE8AO60658 829 aa13.96□□□□□ -0.17
CLP1-203ENST00000529430 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.17
CLP1-203ENST00000529430 FOXD4L6Q3SYB3 417 aaPredicted RBP13.96□□□□□ -0.17
CLP1-203ENST00000529430 FOXD4L3Q6VB84 417 aaPredicted RBP13.96□□□□□ -0.17
CLP1-203ENST00000529430 XAGE2Q96GT9 111 aa13.96□□□□□ -0.17
CLP1-203ENST00000529430 SETDB2Q96T68 719 aa13.96□□□□□ -0.17
CLP1-203ENST00000529430 SEC62Q99442 399 aaKnown RBP13.96□□□□□ -0.17
CLP1-203ENST00000529430 NYXQ9GZU5 481 aa13.96□□□□□ -0.17
CLP1-203ENST00000529430 TSPY26PQ9H489 355 aa13.96□□□□□ -0.17
CLP1-203ENST00000529430 EP400Q96L91 3159 aa13.96□□□□□ -0.17
CLP1-203ENST00000529430 C4BP0C0L5 1744 aa13.96□□□□□ -0.17
CLP1-203ENST00000529430 FAM177BA6PVY3 158 aa13.96□□□□□ -0.18
CLP1-203ENST00000529430 GADD45BO75293 160 aaPredicted RBP13.96□□□□□ -0.18
CLP1-203ENST00000529430 SF3B2Q13435 895 aaKnown RBP13.96□□□□□ -0.18
CLP1-203ENST00000529430 SUSD4Q5VX71 490 aa13.96□□□□□ -0.18
CLP1-203ENST00000529430 Q6ZUG5 572 aa13.96□□□□□ -0.18
CLP1-203ENST00000529430 DHX32Q7L7V1 743 aaKnown RBP13.96□□□□□ -0.18
CLP1-203ENST00000529430 LLPHQ9BRT6 129 aaKnown RBP13.96□□□□□ -0.18
CLP1-203ENST00000529430 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.18
CLP1-203ENST00000529430 CCDC39Q9UFE4 941 aa13.96□□□□□ -0.18
CLP1-203ENST00000529430 SPEF2Q9C093 1822 aa13.95□□□□□ -0.18
CLP1-203ENST00000529430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.95□□□□□ -0.18
CLP1-203ENST00000529430 CTSWP56202 376 aa13.95□□□□□ -0.18
CLP1-203ENST00000529430 KRT85P78386 507 aa13.95□□□□□ -0.18
CLP1-203ENST00000529430 FGD1P98174 961 aa13.95□□□□□ -0.18
CLP1-203ENST00000529430 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
CLP1-203ENST00000529430 ZSCAN25Q6NSZ9 544 aa13.95□□□□□ -0.18
CLP1-203ENST00000529430 GTF3C6Q969F1 213 aa13.95□□□□□ -0.18
CLP1-203ENST00000529430 ZNF512BQ96KM6 892 aaPredicted RBP13.95□□□□□ -0.18
CLP1-203ENST00000529430 KIF3AQ9Y496 699 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms