RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 ELMSAN1Q6PJG2 1045 aa8.27□□□□□ -1.09
CTR9-204ENST00000529355 ZKSCAN3Q9BRR0 538 aa8.27□□□□□ -1.09
CTR9-204ENST00000529355 JPH1Q9HDC5 661 aaPredicted RBP8.27□□□□□ -1.09
CTR9-204ENST00000529355 METTL12A8MUP2 240 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 PROCP04070 461 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 DGKGP49619 791 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 LINC00114Q6XXX2 140 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 POP1Q99575 1024 aaKnown RBP8.26□□□□□ -1.09
CTR9-204ENST00000529355 OSMRQ99650 979 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 LRRC4BQ9NT99 713 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 DZANK1Q9NVP4 752 aa8.26□□□□□ -1.09
CTR9-204ENST00000529355 A0A1W2PP55 124 aa8.25□□□□□ -1.09
CTR9-204ENST00000529355 GHRHP01286 108 aa8.25□□□□□ -1.09
CTR9-204ENST00000529355 AFF1P51825 1210 aaKnown RBP8.25□□□□□ -1.09
CTR9-204ENST00000529355 CEP135Q66GS9 1140 aa8.25□□□□□ -1.09
CTR9-204ENST00000529355 FBXO33Q7Z6M2 555 aa8.25□□□□□ -1.09
CTR9-204ENST00000529355 FOXD4L4Q8WXT5 416 aaPredicted RBP8.25□□□□□ -1.09
CTR9-204ENST00000529355 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
CTR9-204ENST00000529355 PBX4Q9BYU1 374 aa8.25□□□□□ -1.09
CTR9-204ENST00000529355 LACRTQ9GZZ8 138 aa8.25□□□□□ -1.09
CTR9-204ENST00000529355 RGS9O75916 674 aaPredicted RBP8.24□□□□□ -1.09
CTR9-204ENST00000529355 GDF6Q6KF10 455 aaPredicted RBP8.24□□□□□ -1.09
CTR9-204ENST00000529355 RGS22Q8NE09 1264 aa8.24□□□□□ -1.09
CTR9-204ENST00000529355 PMEPA1Q969W9 287 aa8.24□□□□□ -1.09
CTR9-204ENST00000529355 TRIM11Q96F44 468 aa8.24□□□□□ -1.09
CTR9-204ENST00000529355 KRTAP4-12Q9BQ66 201 aa8.24□□□□□ -1.09
CTR9-204ENST00000529355 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
CTR9-204ENST00000529355 SUV39H2Q9H5I1 410 aa8.24□□□□□ -1.09
CTR9-204ENST00000529355 LDHBP07195 334 aaKnown RBP8.23□□□□□ -1.09
CTR9-204ENST00000529355 BAG6P46379 1132 aa8.23□□□□□ -1.09
CTR9-204ENST00000529355 PCSK7Q16549 785 aa8.23□□□□□ -1.09
CTR9-204ENST00000529355 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.23□□□□□ -1.09
CTR9-204ENST00000529355 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
CTR9-204ENST00000529355 ENAMQ9NRM1 1142 aa8.23□□□□□ -1.09
CTR9-204ENST00000529355 NID1P14543 1247 aa8.22□□□□□ -1.09
CTR9-204ENST00000529355 CDC25BP30305 580 aa8.22□□□□□ -1.09
CTR9-204ENST00000529355 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
CTR9-204ENST00000529355 NXPE3Q969Y0 559 aa8.22□□□□□ -1.09
CTR9-204ENST00000529355 FAM161BQ96MY7 647 aa8.22□□□□□ -1.09
CTR9-204ENST00000529355 TCF12Q99081 682 aa8.22□□□□□ -1.09
CTR9-204ENST00000529355 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
CTR9-204ENST00000529355 LILRB5O75023 590 aa8.21□□□□□ -1.1
CTR9-204ENST00000529355 NEFLP07196 543 aa8.21□□□□□ -1.1
CTR9-204ENST00000529355 EDN3P14138 238 aa8.21□□□□□ -1.1
CTR9-204ENST00000529355 GRIA4P48058 902 aa8.21□□□□□ -1.1
CTR9-204ENST00000529355 SPRED3Q2MJR0 410 aa8.21□□□□□ -1.1
CTR9-204ENST00000529355 FRRS1LQ9P0K9 344 aa8.21□□□□□ -1.1
CTR9-204ENST00000529355 FAM229AH3BQW9 127 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
CTR9-204ENST00000529355 GADD45BO75293 160 aaPredicted RBP8.2□□□□□ -1.1
CTR9-204ENST00000529355 ITGB2P05107 769 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 GRM2Q14416 872 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 KIAA0319Q5VV43 1072 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 ILDR2Q71H61 639 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 DMRTC2Q8IXT2 367 aaPredicted RBP8.2□□□□□ -1.1
CTR9-204ENST00000529355 IL22RA1Q8N6P7 574 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 GLIS3Q8NEA6 775 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 DUSP9Q99956 384 aaKnown RBP8.2□□□□□ -1.1
CTR9-204ENST00000529355 OSBPL7Q9BZF2 842 aa8.2□□□□□ -1.1
CTR9-204ENST00000529355 HGSNATQ68CP4 663 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 NXPE4Q6UWF7 544 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 TMEM102Q8N9M5 508 aaPredicted RBP8.19□□□□□ -1.1
CTR9-204ENST00000529355 ASAP3Q8TDY4 903 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 GIPC2Q8TF65 315 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 TTC9Q92623 222 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 RBSNQ9H1K0 784 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 EHD4Q9H223 541 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
CTR9-204ENST00000529355 EPHA1P21709 976 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 ZNF428Q96B54 188 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 PLVAPQ9BX97 442 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 BCL2L13Q9BXK5 485 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 KRTAP9-9Q9BYP9 154 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 KRTAP9-4Q9BYQ2 154 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 BCO2Q9BYV7 579 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 MUC3BQ9H195 1237 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 PRDM6Q9NQX0 595 aa8.18□□□□□ -1.1
CTR9-204ENST00000529355 SMNDC1O75940 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTR9-204ENST00000529355 COL8A1P27658 744 aa8.17□□□□□ -1.1
CTR9-204ENST00000529355 MSL1Q68DK7 614 aa8.17□□□□□ -1.1
CTR9-204ENST00000529355 PARP2Q9UGN5 583 aa8.17□□□□□ -1.1
CTR9-204ENST00000529355 KRTAP4-8A0A0G2JLE6 195 aa8.16□□□□□ -1.1
CTR9-204ENST00000529355 LINC01387J3KSC0 135 aa8.16□□□□□ -1.1
CTR9-204ENST00000529355 PRPF40AO75400 957 aaKnown RBP8.16□□□□□ -1.1
CTR9-204ENST00000529355 COL19A1Q14993 1142 aa8.16□□□□□ -1.1
CTR9-204ENST00000529355 VN1R5Q7Z5H4 357 aa8.16□□□□□ -1.1
CTR9-204ENST00000529355 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
CTR9-204ENST00000529355 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
CTR9-204ENST00000529355 ABCB6Q9NP58 842 aa8.16□□□□□ -1.1
CTR9-204ENST00000529355 NLRP2Q9NX02 1062 aa8.16□□□□□ -1.1
CTR9-204ENST00000529355 CCDC9Q9Y3X0 531 aaKnown RBP8.16□□□□□ -1.1
CTR9-204ENST00000529355 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
CTR9-204ENST00000529355 TRAPPC3LQ5T215 181 aa8.15□□□□□ -1.1
CTR9-204ENST00000529355 ALG1LQ6GMV1 187 aa8.15□□□□□ -1.1
CTR9-204ENST00000529355 BEND7Q8N7W2 519 aaPredicted RBP8.15□□□□□ -1.1
CTR9-204ENST00000529355 ADAM19Q9H013 955 aa8.15□□□□□ -1.1
CTR9-204ENST00000529355 MKL2Q9ULH7 1088 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms