RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 NBPF7P0C2Y1 421 aaPredicted RBP15.23■□□□□ 0.03
COPB1-206ENST00000529210 CCDC57Q2TAC2 916 aa15.23■□□□□ 0.03
COPB1-206ENST00000529210 STRIP1Q5VSL9 837 aa15.23■□□□□ 0.03
COPB1-206ENST00000529210 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
COPB1-206ENST00000529210 TXNRD3Q86VQ6 643 aa15.23■□□□□ 0.03
COPB1-206ENST00000529210 SUCLG2Q96I99 432 aa15.23■□□□□ 0.03
COPB1-206ENST00000529210 MKRN1Q9UHC7 482 aaKnown RBP15.23■□□□□ 0.03
COPB1-206ENST00000529210 MYO3BQ8WXR4 1341 aa15.22■□□□□ 0.03
COPB1-206ENST00000529210 EGFRP00533 1210 aa15.22■□□□□ 0.03
COPB1-206ENST00000529210 DEFB115Q30KQ5 88 aa15.22■□□□□ 0.03
COPB1-206ENST00000529210 DACT2Q5SW24 774 aa15.22■□□□□ 0.03
COPB1-206ENST00000529210 HHIPL1Q96JK4 782 aa15.22■□□□□ 0.03
COPB1-206ENST00000529210 TLL2Q9Y6L7 1015 aa15.22■□□□□ 0.03
COPB1-206ENST00000529210 TRAF5O00463 557 aa15.21■□□□□ 0.03
COPB1-206ENST00000529210 VEGFBP49765 207 aa15.21■□□□□ 0.03
COPB1-206ENST00000529210 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.035e-7■■■■■ 34.4
COPB1-206ENST00000529210 KIF4BQ2VIQ3 1234 aa15.21■□□□□ 0.03
COPB1-206ENST00000529210 TBC1D10BQ4KMP7 808 aaPredicted RBP15.21■□□□□ 0.03
COPB1-206ENST00000529210 LDHAL6AQ6ZMR3 332 aa15.21■□□□□ 0.03
COPB1-206ENST00000529210 GLIS2Q9BZE0 524 aaPredicted RBP15.21■□□□□ 0.03
COPB1-206ENST00000529210 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
COPB1-206ENST00000529210 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
COPB1-206ENST00000529210 POLR2AP24928 1970 aaKnown RBP15.21■□□□□ 0.03
COPB1-206ENST00000529210 USP17L8P0C7I0 530 aa15.2■□□□□ 0.02
COPB1-206ENST00000529210 HSPA1AP0DMV8 641 aaKnown RBP15.2■□□□□ 0.02
COPB1-206ENST00000529210 HSPA1BP0DMV9 641 aaKnown RBP15.2■□□□□ 0.02
COPB1-206ENST00000529210 CHMP3Q9Y3E7 222 aa15.2■□□□□ 0.02
COPB1-206ENST00000529210 PITPNM2Q9BZ72 1349 aa15.19■□□□□ 0.02
COPB1-206ENST00000529210 IL1R1P14778 569 aa15.19■□□□□ 0.02
COPB1-206ENST00000529210 KLRK1P26718 216 aa15.19■□□□□ 0.02
COPB1-206ENST00000529210 DIEXFQ68CQ4 756 aaKnown RBP15.19■□□□□ 0.02
COPB1-206ENST00000529210 SAPCD2Q86UD0 394 aa15.19■□□□□ 0.02
COPB1-206ENST00000529210 ANKRD44Q8N8A2 993 aa15.19■□□□□ 0.02
COPB1-206ENST00000529210 BICC1Q9H694 974 aaKnown RBP15.19■□□□□ 0.02
COPB1-206ENST00000529210 CD209Q9NNX6 404 aa15.19■□□□□ 0.02
COPB1-206ENST00000529210 ABT1Q9ULW3 272 aaKnown RBP15.19■□□□□ 0.02
COPB1-206ENST00000529210 WDR33Q9C0J8 1336 aaKnown RBP15.18■□□□□ 0.02
COPB1-206ENST00000529210 TAF5LO75529 589 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 CELF2O95319 508 aaKnown RBP15.18■□□□□ 0.02
COPB1-206ENST00000529210 ECE1P42892 770 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 KCNJ4P48050 445 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 RARSP54136 660 aaKnown RBP15.18■□□□□ 0.02
COPB1-206ENST00000529210 UBE4AQ14139 1066 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 KRT26Q7Z3Y9 468 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 ARHGAP45Q92619 1136 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
COPB1-206ENST00000529210 ZNF594Q96JF6 807 aaPredicted RBP15.18■□□□□ 0.02
COPB1-206ENST00000529210 MYOZ2Q9NPC6 264 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 RIPOR2Q9Y4F9 1068 aa15.18■□□□□ 0.02
COPB1-206ENST00000529210 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
COPB1-206ENST00000529210 TTLL5Q6EMB2 1281 aa15.17■□□□□ 0.02
COPB1-206ENST00000529210 USP48Q86UV5 1035 aa15.17■□□□□ 0.02
COPB1-206ENST00000529210 MIER1Q8N108 512 aa15.17■□□□□ 0.02
COPB1-206ENST00000529210 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
COPB1-206ENST00000529210 CNNM1Q9NRU3 951 aa15.17■□□□□ 0.02
COPB1-206ENST00000529210 WBP1LQ9NX94 342 aa15.17■□□□□ 0.02
COPB1-206ENST00000529210 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
COPB1-206ENST00000529210 KIF16BQ96L93 1317 aa15.17■□□□□ 0.02
COPB1-206ENST00000529210 SNAP23O00161 211 aa15.16■□□□□ 0.02
COPB1-206ENST00000529210 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
COPB1-206ENST00000529210 ZNF804AQ7Z570 1209 aa15.16■□□□□ 0.02
COPB1-206ENST00000529210 HELBQ8NG08 1087 aaPredicted RBP15.16■□□□□ 0.02
COPB1-206ENST00000529210 GGA3Q9NZ52 723 aa15.16■□□□□ 0.02
COPB1-206ENST00000529210 NOB1Q9ULX3 412 aaKnown RBP15.16■□□□□ 0.02
COPB1-206ENST00000529210 SCARF1Q14162 830 aa15.15■□□□□ 0.02
COPB1-206ENST00000529210 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
COPB1-206ENST00000529210 SULF1Q8IWU6 871 aa15.15■□□□□ 0.02
COPB1-206ENST00000529210 OGFOD1Q8N543 542 aa15.15■□□□□ 0.02
COPB1-206ENST00000529210 VGLL2Q8N8G2 317 aa15.15■□□□□ 0.02
COPB1-206ENST00000529210 ZBED3Q96IU2 234 aaPredicted RBP15.15■□□□□ 0.02
COPB1-206ENST00000529210 CAPNS2Q96L46 248 aa15.15■□□□□ 0.02
COPB1-206ENST00000529210 PUS3Q9BZE2 481 aaKnown RBP15.15■□□□□ 0.02
COPB1-206ENST00000529210 WNT10BO00744 389 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 KCNA4P22459 653 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 MAP2K2P36507 400 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 GTF2IP78347 998 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 MAP2K1Q02750 393 aaPredicted RBP15.14■□□□□ 0.01
COPB1-206ENST00000529210 IFFO2Q5TF58 517 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 MTMR14Q8NCE2 650 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 MXD3Q9BW11 206 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
COPB1-206ENST00000529210 FAM205AQ6ZU69 1335 aa15.14■□□□□ 0.01
COPB1-206ENST00000529210 ADM5C9JUS6 153 aa15.13■□□□□ 0.01
COPB1-206ENST00000529210 SASH1O94885 1247 aa15.13■□□□□ 0.01
COPB1-206ENST00000529210 RFX5P48382 616 aaPredicted RBP15.13■□□□□ 0.01
COPB1-206ENST00000529210 ANGEL2Q5VTE6 544 aaKnown RBP15.13■□□□□ 0.01
COPB1-206ENST00000529210 TDRD7Q8NHU6 1098 aaKnown RBP15.13■□□□□ 0.01
COPB1-206ENST00000529210 ARAP2Q8WZ64 1704 aa15.13■□□□□ 0.01
COPB1-206ENST00000529210 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
COPB1-206ENST00000529210 PDE8BO95263 885 aa15.12■□□□□ 0.01
COPB1-206ENST00000529210 FKBP1BP68106 108 aa15.12■□□□□ 0.01
COPB1-206ENST00000529210 LRRC24Q50LG9 513 aa15.12■□□□□ 0.01
COPB1-206ENST00000529210 INTS3Q68E01 1043 aaKnown RBP15.12■□□□□ 0.01
COPB1-206ENST00000529210 CYP4F22Q6NT55 531 aa15.12■□□□□ 0.01
COPB1-206ENST00000529210 CERS5Q8N5B7 392 aa15.12■□□□□ 0.01
COPB1-206ENST00000529210 FAM84BQ96KN1 310 aaPredicted RBP15.12■□□□□ 0.01
COPB1-206ENST00000529210 GBA2Q9HCG7 927 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms