RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
SNRNP35-205ENST00000529201 CST9Q5W186 159 aa17.04■□□□□ 0.32
SNRNP35-205ENST00000529201 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
SNRNP35-205ENST00000529201 TRMT2AQ8IZ69 625 aaKnown RBP17.04■□□□□ 0.32
SNRNP35-205ENST00000529201 HHIPL1Q96JK4 782 aa17.04■□□□□ 0.32
SNRNP35-205ENST00000529201 UTYO14607 1347 aa17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 MYO3BQ8WXR4 1341 aa17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 TRAF5O00463 557 aa17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 ECE1P42892 770 aa17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 CHRNDQ07001 517 aa17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 LMBR1LQ6UX01 489 aa17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 DCPSQ96C86 337 aaKnown RBP17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 TLL2Q9Y6L7 1015 aa17.03■□□□□ 0.32
SNRNP35-205ENST00000529201 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 USP17L8P0C7I0 530 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 KCNJ4P48050 445 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 C15orf52Q6ZUT6 534 aaKnown RBP17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 GMLQ99445 158 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
SNRNP35-205ENST00000529201 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
SNRNP35-205ENST00000529201 CELF2O95319 508 aaKnown RBP17.01■□□□□ 0.31
SNRNP35-205ENST00000529201 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
SNRNP35-205ENST00000529201 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
SNRNP35-205ENST00000529201 FMR1Q06787 632 aaKnown RBP eCLIP17■□□□□ 0.31
SNRNP35-205ENST00000529201 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
SNRNP35-205ENST00000529201 LDHAL6AQ6ZMR3 332 aa17■□□□□ 0.31
SNRNP35-205ENST00000529201 KRT26Q7Z3Y9 468 aa17■□□□□ 0.31
SNRNP35-205ENST00000529201 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
SNRNP35-205ENST00000529201 OGFOD1Q8N543 542 aa17■□□□□ 0.31
SNRNP35-205ENST00000529201 POLR2AP24928 1970 aaKnown RBP16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 WTIPA6NIX2 430 aaPredicted RBP16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 USP48Q86UV5 1035 aa16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 TXNRD3Q86VQ6 643 aa16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
SNRNP35-205ENST00000529201 PITPNM2Q9BZ72 1349 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 A0A1B0GUL6 1792 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 EGFRP00533 1210 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 CAPNS2Q96L46 248 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 WBP1LQ9NX94 342 aa16.98■□□□□ 0.31
SNRNP35-205ENST00000529201 THSD7BQ9C0I4 1608 aa16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 MAP2K2P36507 400 aa16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 SCARF1Q14162 830 aa16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 CD209Q9NNX6 404 aa16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 SMC4Q9NTJ3 1288 aa16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 ZNF646O15015 1829 aaPredicted RBP16.97■□□□□ 0.31
SNRNP35-205ENST00000529201 PCNTO95613 3336 aa16.96■□□□□ 0.31
SNRNP35-205ENST00000529201 TAF5LO75529 589 aa16.96■□□□□ 0.31
SNRNP35-205ENST00000529201 KAZALD1Q96I82 304 aa16.96■□□□□ 0.31
SNRNP35-205ENST00000529201 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
SNRNP35-205ENST00000529201 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
SNRNP35-205ENST00000529201 HDAC9Q9UKV0 1011 aa16.96■□□□□ 0.31
SNRNP35-205ENST00000529201 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.3
SNRNP35-205ENST00000529201 IL1R1P14778 569 aa16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 UBE4AQ14139 1066 aa16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 COL13A1Q5TAT6 717 aaPredicted RBP16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 HELBQ8NG08 1087 aaPredicted RBP16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 FBXW7Q969H0 707 aa16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 ZNF594Q96JF6 807 aaPredicted RBP16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 MROH5Q6ZUA9 1318 aa16.95■□□□□ 0.3
SNRNP35-205ENST00000529201 KLRK1P26718 216 aa16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 FKBP1AP62942 108 aaKnown RBP16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 GTF2IP78347 998 aa16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 ANGEL2Q5VTE6 544 aaKnown RBP16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 BEGAINQ9BUH8 593 aa16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 USP44Q9H0E7 712 aa16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 GBA2Q9HCG7 927 aaPredicted RBP16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 PRDM10Q9NQV6 1147 aa16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
SNRNP35-205ENST00000529201 FOXN1O15353 648 aa16.93■□□□□ 0.3
SNRNP35-205ENST00000529201 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
SNRNP35-205ENST00000529201 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
SNRNP35-205ENST00000529201 PLIN1O60240 522 aa16.92■□□□□ 0.3
SNRNP35-205ENST00000529201 HUNKP57058 714 aa16.92■□□□□ 0.3
SNRNP35-205ENST00000529201 FKBP1BP68106 108 aa16.92■□□□□ 0.3
SNRNP35-205ENST00000529201 ARHGAP45Q92619 1136 aa16.92■□□□□ 0.3
SNRNP35-205ENST00000529201 RIPOR2Q9Y4F9 1068 aa16.92■□□□□ 0.3
SNRNP35-205ENST00000529201 SASH1O94885 1247 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms