RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ADGRE1Q14246 886 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 MBTPS1Q14703 1052 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 GJD3Q8N144 294 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 CACTIN-AS1Q8N1I8 211 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 IL22RA1Q8N6P7 574 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 CITED4Q96RK1 184 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 KANSL3Q9P2N6 904 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 USP21Q9UK80 565 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 CEP135Q66GS9 1140 aa8.4□□□□□ -1.06
CSDE1-212ENST00000529046 RBCK1Q9BYM8 510 aa8.4□□□□□ -1.06
CSDE1-212ENST00000529046 CNTN3Q9P232 1028 aa8.4□□□□□ -1.06
CSDE1-212ENST00000529046 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-212ENST00000529046 CES1P23141 567 aa8.39□□□□□ -1.07
CSDE1-212ENST00000529046 USP5P45974 858 aa8.39□□□□□ -1.07
CSDE1-212ENST00000529046 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-212ENST00000529046 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
CSDE1-212ENST00000529046 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
CSDE1-212ENST00000529046 FAM129BQ96TA1 746 aa8.39□□□□□ -1.07
CSDE1-212ENST00000529046 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
CSDE1-212ENST00000529046 TPSG1Q9NRR2 321 aa8.39□□□□□ -1.07
CSDE1-212ENST00000529046 EHHADHQ08426 723 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 CEP120Q8N960 986 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 PBX4Q9BYU1 374 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 LACRTQ9GZZ8 138 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 SRA1Q9HD15 236 aaKnown RBP8.38□□□□□ -1.07
CSDE1-212ENST00000529046 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 DCTN4Q9UJW0 460 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
CSDE1-212ENST00000529046 KRTAP9-6A0A140TA67 174 aa8.37□□□□□ -1.07
CSDE1-212ENST00000529046 IGF2-ASQ6U949 168 aa8.37□□□□□ -1.07
CSDE1-212ENST00000529046 MAP4K3Q8IVH8 894 aa8.37□□□□□ -1.07
CSDE1-212ENST00000529046 DCAF11Q8TEB1 546 aa8.37□□□□□ -1.07
CSDE1-212ENST00000529046 PMEPA1Q969W9 287 aa8.37□□□□□ -1.07
CSDE1-212ENST00000529046 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
CSDE1-212ENST00000529046 PPME1Q9Y570 386 aa8.37□□□□□ -1.07
CSDE1-212ENST00000529046 DLL1O00548 723 aa8.36□□□□□ -1.07
CSDE1-212ENST00000529046 CHRDQ9H2X0 955 aa8.36□□□□□ -1.07
CSDE1-212ENST00000529046 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
CSDE1-212ENST00000529046 PHACTR2O75167 634 aa8.35□□□□□ -1.07
CSDE1-212ENST00000529046 TNFRSF21O75509 655 aa8.35□□□□□ -1.07
CSDE1-212ENST00000529046 CDC27P30260 824 aa8.35□□□□□ -1.07
CSDE1-212ENST00000529046 SNX29Q8TEQ0 813 aa8.35□□□□□ -1.07
CSDE1-212ENST00000529046 ALKBH8Q96BT7 664 aaKnown RBP8.35□□□□□ -1.07
CSDE1-212ENST00000529046 ASB16Q96NS5 453 aa8.35□□□□□ -1.07
CSDE1-212ENST00000529046 SEMA6BQ9H3T3 888 aa8.35□□□□□ -1.07
CSDE1-212ENST00000529046 BIN2Q9UBW5 565 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-212ENST00000529046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-212ENST00000529046 LINC01387J3KSC0 135 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 NDUFB5O43674 189 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 ACPPP15309 386 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 PTPRAP18433 802 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 SETDB1Q15047 1291 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 RSPO4Q2I0M5 234 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-212ENST00000529046 CCDC27Q2M243 656 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 TMCO4Q5TGY1 634 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 PSMG3-AS1Q96PY0 264 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 BRPF3Q9ULD4 1205 aa8.34□□□□□ -1.07
CSDE1-212ENST00000529046 DSC3Q14574 896 aa8.33□□□□□ -1.08
CSDE1-212ENST00000529046 NKAPLQ5M9Q1 402 aa8.33□□□□□ -1.08
CSDE1-212ENST00000529046 TXNDC11Q6PKC3 985 aa8.33□□□□□ -1.08
CSDE1-212ENST00000529046 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
CSDE1-212ENST00000529046 WFDC12Q8WWY7 111 aa8.33□□□□□ -1.08
CSDE1-212ENST00000529046 POP1Q99575 1024 aaKnown RBP8.33□□□□□ -1.08
CSDE1-212ENST00000529046 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
CSDE1-212ENST00000529046 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-212ENST00000529046 EREGO14944 169 aa8.32□□□□□ -1.08
CSDE1-212ENST00000529046 NOS3P29474 1203 aa8.32□□□□□ -1.08
CSDE1-212ENST00000529046 CDC25BP30305 580 aa8.32□□□□□ -1.08
CSDE1-212ENST00000529046 IREB2P48200 963 aaKnown RBP8.32□□□□□ -1.08
CSDE1-212ENST00000529046 FAM117BQ6P1L5 589 aa8.32□□□□□ -1.08
CSDE1-212ENST00000529046 ADAMTSL4Q6UY14 1074 aa8.32□□□□□ -1.08
CSDE1-212ENST00000529046 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
CSDE1-212ENST00000529046 DZANK1Q9NVP4 752 aa8.32□□□□□ -1.08
CSDE1-212ENST00000529046 GPR182O15218 404 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 EDN3P14138 238 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 ERCC3P19447 782 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 EPHA1P21709 976 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 COL19A1Q14993 1142 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 TP53INP1Q96A56 240 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
CSDE1-212ENST00000529046 SH2B1Q9NRF2 756 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-212ENST00000529046 NFKBIEO00221 500 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 PDE2AO00408 941 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-212ENST00000529046 TREHO43280 583 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 DYRK3O43781 588 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 MAPK1P28482 360 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 MFAP1P55081 439 aaKnown RBP8.3□□□□□ -1.08
CSDE1-212ENST00000529046 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 GALNT11Q8NCW6 608 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 SSBP4Q9BWG4 385 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-212ENST00000529046 AKTIPQ9H8T0 292 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 AMOTL2Q9Y2J4 779 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
CSDE1-212ENST00000529046 TRPA1O75762 1119 aa8.29□□□□□ -1.08
CSDE1-212ENST00000529046 CABP4P57796 275 aa8.29□□□□□ -1.08
CSDE1-212ENST00000529046 TMEM130Q8N3G9 435 aa8.29□□□□□ -1.08
CSDE1-212ENST00000529046 TMEM102Q8N9M5 508 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms