RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-206	ENST00000528748	KIAA1468	Q9P260	1216 aa		13.81	□□□□□ -0.2
CDC27-206	ENST00000528748	LRP5	O75197	1615 aa		13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	C20orf194	Q5TEA3	1177 aa		13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	LAPTM4B	Q86VI4	370 aa		13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	PDZRN3	Q9UPQ7	1066 aa		13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	KIF13B	Q9NQT8	1826 aa		13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	ABCC12	Q96J65	1359 aa		13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	C10orf71	Q711Q0	1435 aa		13.8	□□□□□ -0.2
CDC27-206	ENST00000528748	PDE8A	O60658	829 aa		13.79	□□□□□ -0.2
CDC27-206	ENST00000528748	PLA2G12B	Q9BX93	195 aa		13.79	□□□□□ -0.2
CDC27-206	ENST00000528748	ANKRD31	Q8N7Z5	1873 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748		A0A0G2JLW4	131 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748		H0YIN7	160 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	ZBTB7B	O15156	539 aa	Predicted RBP	13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	SRGN	P10124	158 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	DPEP1	P16444	411 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	KCNA3	P22001	575 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	CHRNA5	P30532	468 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	SF3B3	Q15393	1217 aa	Known RBP	13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	CRY2	Q49AN0	593 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	PACS2	Q86VP3	889 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	C2CD5	Q86YS7	1000 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	ITPRIP	Q8IWB1	547 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	CDHR5	Q9HBB8	845 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	COG6	Q9Y2V7	657 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	RIC1	Q4ADV7	1423 aa		13.78	□□□□□ -0.2
CDC27-206	ENST00000528748	SEMA3E	O15041	775 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	CENPB	P07199	599 aa	Predicted RBP	13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	CSF1R	P07333	972 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	GNAI3	P08754	354 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	PRSS12	P56730	875 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	FOXO4	P98177	505 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	MVP	Q14764	893 aa	Known RBP	13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	NLGN2	Q8NFZ4	835 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	WNT2B	Q93097	391 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	KAZALD1	Q96I82	304 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	SUCLG2	Q96I99	432 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	MEIS3	Q99687	375 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	HDAC5	Q9UQL6	1122 aa		13.77	□□□□□ -0.21
CDC27-206	ENST00000528748	UBTFL1	P0CB47	393 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	NPR1	P16066	1061 aa		13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	HOXA10	P31260	410 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	EPHA10	Q5JZY3	1008 aa		13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	TTLL11	Q8NHH1	800 aa		13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	MASTL	Q96GX5	879 aa		13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	RBM27	Q9P2N5	1060 aa	Known RBP	13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	DDX60	Q8IY21	1712 aa	Known RBP	13.76	□□□□□ -0.21
CDC27-206	ENST00000528748	CTSW	P56202	376 aa		13.75	□□□□□ -0.21
CDC27-206	ENST00000528748	STYK1	Q6J9G0	422 aa		13.75	□□□□□ -0.21
CDC27-206	ENST00000528748	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	1e-7	■□□□□ 9.8
CDC27-206	ENST00000528748	RBM17	Q96I25	401 aa	Known RBP	13.75	□□□□□ -0.21
CDC27-206	ENST00000528748	PIM2	Q9P1W9	311 aa		13.75	□□□□□ -0.21
CDC27-206	ENST00000528748	TSKS	Q9UJT2	592 aa		13.75	□□□□□ -0.21
CDC27-206	ENST00000528748	DDX19B	Q9UMR2	479 aa		13.75	□□□□□ -0.21
CDC27-206	ENST00000528748	ALDH1B1	P30837	517 aa		13.74	□□□□□ -0.21
CDC27-206	ENST00000528748	CCDC152	Q4G0S7	254 aa		13.74	□□□□□ -0.21
CDC27-206	ENST00000528748	LMBR1L	Q6UX01	489 aa		13.74	□□□□□ -0.21
CDC27-206	ENST00000528748	RPGR	Q92834	1020 aa	Known RBP	13.74	□□□□□ -0.21
CDC27-206	ENST00000528748	CRAMP1	Q96RY5	1269 aa		13.74	□□□□□ -0.21
CDC27-206	ENST00000528748	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	GNAI2	P04899	355 aa		13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	RABL6	Q3YEC7	729 aa	Predicted RBP	13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	SMYD5	Q6GMV2	418 aa		13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	THSD4	Q6ZMP0	1018 aa		13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	DDX46	Q7L014	1031 aa	Known RBP	13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	ANKK1	Q8NFD2	765 aa		13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	CNKSR1	Q969H4	720 aa		13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	CHMP4B	Q9H444	224 aa	Known RBP	13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	BICC1	Q9H694	974 aa	Known RBP	13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	LRRFIP2	Q9Y608	721 aa	Known RBP	13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	LAMB2	P55268	1798 aa		13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	KIAA1551	Q9HCM1	1747 aa		13.73	□□□□□ -0.21
CDC27-206	ENST00000528748	MYH3	P11055	1940 aa		13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	TTLL6	Q8N841	843 aa		13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	ANKRD44	Q8N8A2	993 aa		13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	GREM2	Q9H772	168 aa		13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	SEC31B	Q9NQW1	1179 aa		13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	ZBTB40	Q9NUA8	1239 aa		13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.72	□□□□□ -0.21
CDC27-206	ENST00000528748	BBOX1	O75936	387 aa		13.71	□□□□□ -0.21
CDC27-206	ENST00000528748	RPS8	P62241	208 aa	Known RBP	13.71	□□□□□ -0.21
CDC27-206	ENST00000528748	CRBN	Q96SW2	442 aa		13.71	□□□□□ -0.21
CDC27-206	ENST00000528748	RTL9	Q8NET4	1388 aa		13.71	□□□□□ -0.22
CDC27-206	ENST00000528748	TESPA1	A2RU30	521 aa	Predicted RBP	13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	ITGA6	P23229	1130 aa		13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	GRAP	Q13588	217 aa		13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	CCDC57	Q2TAC2	916 aa		13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	DALRD3	Q5D0E6	543 aa	Known RBP	13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	GRAPL	Q8TC17	118 aa	Predicted RBP	13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	CELF1	Q92879	486 aa	Known RBP	13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	ZFR	Q96KR1	1074 aa	Known RBP	13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	CHMP3	Q9Y3E7	222 aa		13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	COL11A2	P13942	1736 aa	Predicted RBP	13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	TAF1	P21675	1872 aa		13.7	□□□□□ -0.22
CDC27-206	ENST00000528748	DLEC1	Q9Y238	1755 aa		13.69	□□□□□ -0.22
CDC27-206	ENST00000528748	ANKRD18B	A2A2Z9	1011 aa		13.69	□□□□□ -0.22

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