RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 HIRAP54198 1017 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-216ENST00000528739 ZNF408Q9H9D4 720 aa17.92■□□□□ 0.46
CAPN1-216ENST00000528739 LTBP1Q14766 1721 aa17.92■□□□□ 0.46
CAPN1-216ENST00000528739 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
CAPN1-216ENST00000528739 BCAR3O75815 825 aa17.91■□□□□ 0.46
CAPN1-216ENST00000528739 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
CAPN1-216ENST00000528739 KIF4BQ2VIQ3 1234 aa17.91■□□□□ 0.46
CAPN1-216ENST00000528739 TTLL5Q6EMB2 1281 aa17.91■□□□□ 0.46
CAPN1-216ENST00000528739 PAXIP1Q6ZW49 1069 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-216ENST00000528739 AGBL3Q8NEM8 1001 aa17.91■□□□□ 0.46
CAPN1-216ENST00000528739 GLIS2Q9BZE0 524 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-216ENST00000528739 PUS3Q9BZE2 481 aaKnown RBP17.91■□□□□ 0.46
CAPN1-216ENST00000528739 HDAC5Q9UQL6 1122 aa17.91■□□□□ 0.46
CAPN1-216ENST00000528739 USP17L8P0C7I0 530 aa17.9■□□□□ 0.46
CAPN1-216ENST00000528739 BRPF1P55201 1214 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-216ENST00000528739 GTF2IP78347 998 aa17.9■□□□□ 0.46
CAPN1-216ENST00000528739 METTL24Q5JXM2 366 aa17.9■□□□□ 0.46
CAPN1-216ENST00000528739 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
CAPN1-216ENST00000528739 ZNF804AQ7Z570 1209 aa17.9■□□□□ 0.46
CAPN1-216ENST00000528739 ANKRD44Q8N8A2 993 aa17.9■□□□□ 0.46
CAPN1-216ENST00000528739 ZC3H15Q8WU90 426 aaKnown RBP17.9■□□□□ 0.46
CAPN1-216ENST00000528739 DCPSQ96C86 337 aaKnown RBP17.9■□□□□ 0.46
CAPN1-216ENST00000528739 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
CAPN1-216ENST00000528739 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-216ENST00000528739 USP48Q86UV5 1035 aa17.89■□□□□ 0.45
CAPN1-216ENST00000528739 OGFOD1Q8N543 542 aa17.89■□□□□ 0.45
CAPN1-216ENST00000528739 KLHDC4Q8TBB5 520 aa17.89■□□□□ 0.45
CAPN1-216ENST00000528739 ARHGAP45Q92619 1136 aa17.89■□□□□ 0.45
CAPN1-216ENST00000528739 CLUAP1Q96AJ1 413 aa17.89■□□□□ 0.45
CAPN1-216ENST00000528739 CD209Q9NNX6 404 aa17.89■□□□□ 0.45
CAPN1-216ENST00000528739 CELF2O95319 508 aaKnown RBP17.88■□□□□ 0.45
CAPN1-216ENST00000528739 EGFRP00533 1210 aa17.88■□□□□ 0.45
CAPN1-216ENST00000528739 LRRC24Q50LG9 513 aa17.88■□□□□ 0.45
CAPN1-216ENST00000528739 STRIP1Q5VSL9 837 aa17.88■□□□□ 0.45
CAPN1-216ENST00000528739 MROH5Q6ZUA9 1318 aa17.88■□□□□ 0.45
CAPN1-216ENST00000528739 GRM1Q13255 1194 aa17.87■□□□□ 0.45
CAPN1-216ENST00000528739 DEFB115Q30KQ5 88 aa17.87■□□□□ 0.45
CAPN1-216ENST00000528739 KRT26Q7Z3Y9 468 aa17.87■□□□□ 0.45
CAPN1-216ENST00000528739 VPS37DQ86XT2 251 aa17.87■□□□□ 0.45
CAPN1-216ENST00000528739 MYOZ2Q9NPC6 264 aa17.87■□□□□ 0.45
CAPN1-216ENST00000528739 HDAC9Q9UKV0 1011 aa17.87■□□□□ 0.45
CAPN1-216ENST00000528739 FRAT2O75474 233 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-216ENST00000528739 UBE4AQ14139 1066 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 SCARF1Q14162 830 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 DACT2Q5SW24 774 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 ATF7IPQ6VMQ6 1270 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 KIAA0825Q8IV33 1275 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 PGAP2Q9UHJ9 254 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 JAG2Q9Y219 1238 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 RIPOR2Q9Y4F9 1068 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 LRRFIP2Q9Y608 721 aaKnown RBP17.86■□□□□ 0.45
CAPN1-216ENST00000528739 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 MYO3BQ8WXR4 1341 aa17.86■□□□□ 0.45
CAPN1-216ENST00000528739 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
CAPN1-216ENST00000528739 SULF1Q8IWU6 871 aa17.85■□□□□ 0.45
CAPN1-216ENST00000528739 MEIS3Q99687 375 aa17.85■□□□□ 0.45
CAPN1-216ENST00000528739 SIL1Q9H173 461 aa17.85■□□□□ 0.45
CAPN1-216ENST00000528739 GGA3Q9NZ52 723 aa17.85■□□□□ 0.45
CAPN1-216ENST00000528739 ADAMTSL1Q8N6G6 1762 aa17.84■□□□□ 0.45
CAPN1-216ENST00000528739 F8W031 263 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-216ENST00000528739 GNAI3P08754 354 aa17.84■□□□□ 0.45
CAPN1-216ENST00000528739 TRIM27P14373 513 aa17.84■□□□□ 0.45
CAPN1-216ENST00000528739 HIBADHP31937 336 aaKnown RBP17.84■□□□□ 0.45
CAPN1-216ENST00000528739 GYG1P46976 350 aa17.84■□□□□ 0.45
CAPN1-216ENST00000528739 ZNF280AP59817 542 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-216ENST00000528739 C15orf52Q6ZUT6 534 aaKnown RBP17.84■□□□□ 0.45
CAPN1-216ENST00000528739 GMLQ99445 158 aa17.84■□□□□ 0.45
CAPN1-216ENST00000528739 TNNQ9UQP3 1299 aa17.84■□□□□ 0.45
CAPN1-216ENST00000528739 CEP350Q5VT06 3117 aa17.83■□□□□ 0.45
CAPN1-216ENST00000528739 ADM5C9JUS6 153 aa17.83■□□□□ 0.44
CAPN1-216ENST00000528739 CAVIN4Q5BKX8 364 aa17.83■□□□□ 0.44
CAPN1-216ENST00000528739 ANGEL2Q5VTE6 544 aaKnown RBP17.83■□□□□ 0.44
CAPN1-216ENST00000528739 CST9Q5W186 159 aa17.83■□□□□ 0.44
CAPN1-216ENST00000528739 INTS3Q68E01 1043 aaKnown RBP17.83■□□□□ 0.44
CAPN1-216ENST00000528739 DLK2Q6UY11 383 aa17.83■□□□□ 0.44
CAPN1-216ENST00000528739 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.44
CAPN1-216ENST00000528739 JMYQ8N9B5 988 aa17.83■□□□□ 0.44
CAPN1-216ENST00000528739 CNTNAP1P78357 1384 aa17.82■□□□□ 0.44
CAPN1-216ENST00000528739 ASTN2O75129 1339 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-216ENST00000528739 EYA2O00167 538 aa17.82■□□□□ 0.44
CAPN1-216ENST00000528739 PDE8BO95263 885 aa17.82■□□□□ 0.44
CAPN1-216ENST00000528739 VEGFBP49765 207 aa17.82■□□□□ 0.44
CAPN1-216ENST00000528739 SCN9AQ15858 1988 aa17.81■□□□□ 0.44
CAPN1-216ENST00000528739 IFIT1P09914 478 aaKnown RBP17.81■□□□□ 0.44
CAPN1-216ENST00000528739 IL1R1P14778 569 aa17.81■□□□□ 0.44
CAPN1-216ENST00000528739 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
CAPN1-216ENST00000528739 FAM84BQ96KN1 310 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-216ENST00000528739 IQSEC3Q9UPP2 1182 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-216ENST00000528739 RBM5P52756 815 aaKnown RBP eCLIP17.8■□□□□ 0.44
CAPN1-216ENST00000528739 CHAF1AQ13111 956 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-216ENST00000528739 NBPF9Q3BBW0 867 aa17.8■□□□□ 0.44
CAPN1-216ENST00000528739 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
CAPN1-216ENST00000528739 SCAF8Q9UPN6 1271 aaKnown RBP17.8■□□□□ 0.44
CAPN1-216ENST00000528739 IRS2Q9Y4H2 1338 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 RASSF10A6NK89 507 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 SRGAP3O43295 1099 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 SASH1O94885 1247 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 GNAI2P04899 355 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 HSPA1AP0DMV8 641 aaKnown RBP17.79■□□□□ 0.44
CAPN1-216ENST00000528739 HSPA1BP0DMV9 641 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms