RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 ZNRF3Q9ULT6 936 aa16.01■□□□□ 0.15
SCN3B-205ENST00000528267 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
SCN3B-205ENST00000528267 MYH13Q9UKX3 1938 aa16.01■□□□□ 0.15
SCN3B-205ENST00000528267 ZNF609O15014 1411 aa16.01■□□□□ 0.15
SCN3B-205ENST00000528267 GLTPD2A6NH11 291 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 RAD17O75943 681 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 IL15P40933 162 aaPredicted RBP16■□□□□ 0.15
SCN3B-205ENST00000528267 GYG1P46976 350 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 TFCP2Q12800 502 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 UBE4AQ14139 1066 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
SCN3B-205ENST00000528267 JDP2Q8WYK2 163 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 NMRK2Q9NPI5 230 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 EXOC6BQ9Y2D4 811 aa16■□□□□ 0.15
SCN3B-205ENST00000528267 SCN4AP35499 1836 aa15.99■□□□□ 0.15
SCN3B-205ENST00000528267 COL1A1P02452 1464 aaPredicted RBP15.99■□□□□ 0.15
SCN3B-205ENST00000528267 ADORA1P30542 326 aa15.99■□□□□ 0.15
SCN3B-205ENST00000528267 KCNJ4P48050 445 aa15.99■□□□□ 0.15
SCN3B-205ENST00000528267 FAM84BQ96KN1 310 aaPredicted RBP15.99■□□□□ 0.15
SCN3B-205ENST00000528267 SHTN1A0MZ66 631 aa15.98■□□□□ 0.15
SCN3B-205ENST00000528267 PSMD14O00487 310 aa15.98■□□□□ 0.15
SCN3B-205ENST00000528267 SURF6O75683 361 aaKnown RBP15.98■□□□□ 0.15
SCN3B-205ENST00000528267 PUM3Q15397 648 aaKnown RBP15.98■□□□□ 0.15
SCN3B-205ENST00000528267 CD209Q9NNX6 404 aa15.98■□□□□ 0.15
SCN3B-205ENST00000528267 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
SCN3B-205ENST00000528267 SCNN1DP51172 638 aa15.97■□□□□ 0.15
SCN3B-205ENST00000528267 ATP2B3Q16720 1220 aa15.97■□□□□ 0.15
SCN3B-205ENST00000528267 FBXO33Q7Z6M2 555 aa15.97■□□□□ 0.15
SCN3B-205ENST00000528267 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
SCN3B-205ENST00000528267 CEP126Q9P2H0 1117 aa15.97■□□□□ 0.15
SCN3B-205ENST00000528267 KIF3CO14782 793 aa15.96■□□□□ 0.15
SCN3B-205ENST00000528267 IL1R1P14778 569 aa15.96■□□□□ 0.15
SCN3B-205ENST00000528267 EIF6P56537 245 aaKnown RBP15.96■□□□□ 0.15
SCN3B-205ENST00000528267 TIMM10P62072 90 aa15.96■□□□□ 0.15
SCN3B-205ENST00000528267 L3MBTL3Q96JM7 780 aaPredicted RBP15.96■□□□□ 0.15
SCN3B-205ENST00000528267 COA1Q9GZY4 146 aa15.96■□□□□ 0.15
SCN3B-205ENST00000528267 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
SCN3B-205ENST00000528267 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
SCN3B-205ENST00000528267 GJA3Q9Y6H8 435 aa15.96■□□□□ 0.15
SCN3B-205ENST00000528267 A0A1B0GUL7 405 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 BCAMP50895 628 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 G3BP1Q13283 466 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCN3B-205ENST00000528267 CIAPIN1Q6FI81 312 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 PODNQ7Z5L7 613 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 GPC2Q8N158 579 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 LPIN2Q92539 896 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 TLR7Q9NYK1 1049 aaKnown RBP15.95■□□□□ 0.14
SCN3B-205ENST00000528267 JAG2Q9Y219 1238 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 AKAP11Q9UKA4 1901 aa15.95■□□□□ 0.14
SCN3B-205ENST00000528267 DACT2Q5SW24 774 aa15.94■□□□□ 0.14
SCN3B-205ENST00000528267 CERS5Q8N5B7 392 aa15.94■□□□□ 0.14
SCN3B-205ENST00000528267 TDRD7Q8NHU6 1098 aaKnown RBP15.94■□□□□ 0.14
SCN3B-205ENST00000528267 IQSEC3Q9UPP2 1182 aaPredicted RBP15.94■□□□□ 0.14
SCN3B-205ENST00000528267 VIL1P09327 827 aaKnown RBP15.93■□□□□ 0.14
SCN3B-205ENST00000528267 SLC5A1P13866 664 aa15.93■□□□□ 0.14
SCN3B-205ENST00000528267 HIBADHP31937 336 aaKnown RBP15.93■□□□□ 0.14
SCN3B-205ENST00000528267 PHKA1P46020 1223 aa15.93■□□□□ 0.14
SCN3B-205ENST00000528267 GMPSP49915 693 aaPredicted RBP15.93■□□□□ 0.14
SCN3B-205ENST00000528267 TNNI3KQ59H18 835 aa15.93■□□□□ 0.14
SCN3B-205ENST00000528267 EAF2Q96CJ1 260 aaPredicted RBP15.93■□□□□ 0.14
SCN3B-205ENST00000528267 GMLQ99445 158 aa15.93■□□□□ 0.14
SCN3B-205ENST00000528267 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
SCN3B-205ENST00000528267 FPGT-TNNI3KV9GXZ4 949 aa15.93■□□□□ 0.14
SCN3B-205ENST00000528267 KDM2BQ8NHM5 1336 aa15.93■□□□□ 0.14
SCN3B-205ENST00000528267 IFIT1P09914 478 aaKnown RBP15.92■□□□□ 0.14
SCN3B-205ENST00000528267 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 POTEJP0CG39 1038 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 EPS15P42566 896 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 GTF2IP78347 998 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 GRIK5Q16478 980 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 DPY19L2Q6NUT2 758 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 ZNF804AQ7Z570 1209 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 XAGE2Q96GT9 111 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 DCTPP1Q9H773 170 aa15.92■□□□□ 0.14
SCN3B-205ENST00000528267 MYO5AQ9Y4I1 1855 aaKnown RBP15.92■□□□□ 0.14
SCN3B-205ENST00000528267 USP17L3A6NCW0 530 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 APBB1O00213 710 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 HMMRO75330 724 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 EGFRP00533 1210 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 OS9Q13438 667 aaPredicted RBP15.91■□□□□ 0.14
SCN3B-205ENST00000528267 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
SCN3B-205ENST00000528267 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 DBNDD2Q9BQY9 259 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 IL1RAPL2Q9NP60 686 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 GPR108Q9NPR9 543 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 DBNLQ9UJU6 430 aaKnown RBP15.91■□□□□ 0.14
SCN3B-205ENST00000528267 FAM205AQ6ZU69 1335 aa15.91■□□□□ 0.14
SCN3B-205ENST00000528267 G3V3G9 751 aa15.9■□□□□ 0.14
SCN3B-205ENST00000528267 DCAF8Q5TAQ9 597 aa15.9■□□□□ 0.14
SCN3B-205ENST00000528267 STRIP1Q5VSL9 837 aa15.9■□□□□ 0.14
SCN3B-205ENST00000528267 CCDC102BQ68D86 513 aa15.9■□□□□ 0.14
SCN3B-205ENST00000528267 CCDC8Q9H0W5 538 aaPredicted RBP15.9■□□□□ 0.14
SCN3B-205ENST00000528267 GPRC5DQ9NZD1 345 aa15.9■□□□□ 0.14
SCN3B-205ENST00000528267 SMARCA5O60264 1052 aaPredicted RBP15.89■□□□□ 0.13
SCN3B-205ENST00000528267 IGHDP01880 384 aa15.89■□□□□ 0.13
SCN3B-205ENST00000528267 SCARF1Q14162 830 aa15.89■□□□□ 0.13
SCN3B-205ENST00000528267 TNIP1Q15025 636 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms