RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 LINS1Q8NG48 757 aa28.54■■■□□ 2.16
TRAPPC4-208ENST00000527680 CA12O43570 354 aa28.53■■■□□ 2.16
TRAPPC4-208ENST00000527680 ANGEL2Q5VTE6 544 aaKnown RBP28.53■■■□□ 2.16
TRAPPC4-208ENST00000527680 RGMBQ6NW40 437 aa28.53■■■□□ 2.16
TRAPPC4-208ENST00000527680 MYOZ2Q9NPC6 264 aa28.53■■■□□ 2.16
TRAPPC4-208ENST00000527680 THSD7BQ9C0I4 1608 aa28.52■■■□□ 2.16
TRAPPC4-208ENST00000527680 FAM9BQ8IZU0 186 aa28.52■■■□□ 2.16
TRAPPC4-208ENST00000527680 PLA2G12BQ9BX93 195 aa28.52■■■□□ 2.16
TRAPPC4-208ENST00000527680 ANKRD2Q9GZV1 360 aa28.52■■■□□ 2.16
TRAPPC4-208ENST00000527680 LEMD3Q9Y2U8 911 aa28.52■■■□□ 2.16
TRAPPC4-208ENST00000527680 SPEF2Q9C093 1822 aa28.52■■■□□ 2.16
TRAPPC4-208ENST00000527680 MED23Q9ULK4 1368 aa28.51■■■□□ 2.16
TRAPPC4-208ENST00000527680 ZNF157P51786 506 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC4-208ENST00000527680 FAM161AQ3B820 660 aa28.51■■■□□ 2.15
TRAPPC4-208ENST00000527680 GMLQ99445 158 aa28.51■■■□□ 2.15
TRAPPC4-208ENST00000527680 CACNA1FO60840 1977 aa28.51■■■□□ 2.15
TRAPPC4-208ENST00000527680 KCNJ4P48050 445 aa28.5■■■□□ 2.15
TRAPPC4-208ENST00000527680 OGFOD1Q8N543 542 aa28.5■■■□□ 2.15
TRAPPC4-208ENST00000527680 CCDC102AQ96A19 550 aa28.5■■■□□ 2.15
TRAPPC4-208ENST00000527680 COA1Q9GZY4 146 aa28.5■■■□□ 2.15
TRAPPC4-208ENST00000527680 CSF1RP07333 972 aa28.49■■■□□ 2.15
TRAPPC4-208ENST00000527680 CDCA5Q96FF9 252 aa28.49■■■□□ 2.15
TRAPPC4-208ENST00000527680 ABHD8Q96I13 439 aa28.49■■■□□ 2.15
TRAPPC4-208ENST00000527680 ZIC5Q96T25 663 aa28.49■■■□□ 2.15
TRAPPC4-208ENST00000527680 ZNF804BA4D1E1 1349 aa28.48■■■□□ 2.15
TRAPPC4-208ENST00000527680 ANKRD18BA2A2Z9 1011 aa28.48■■■□□ 2.15
TRAPPC4-208ENST00000527680 CASP7P55210 303 aa28.48■■■□□ 2.15
TRAPPC4-208ENST00000527680 MXD3Q9BW11 206 aa28.48■■■□□ 2.15
TRAPPC4-208ENST00000527680 CHMP3Q9Y3E7 222 aa28.48■■■□□ 2.15
TRAPPC4-208ENST00000527680 F6X3S4 739 aa28.47■■■□□ 2.15
TRAPPC4-208ENST00000527680 TXNRD3Q86VQ6 643 aa28.47■■■□□ 2.15
TRAPPC4-208ENST00000527680 DACT2Q5SW24 774 aa28.46■■■□□ 2.15
TRAPPC4-208ENST00000527680 STRIP1Q5VSL9 837 aa28.46■■■□□ 2.15
TRAPPC4-208ENST00000527680 TTLL5Q6EMB2 1281 aa28.46■■■□□ 2.15
TRAPPC4-208ENST00000527680 PSME4Q14997 1843 aa28.46■■■□□ 2.15
TRAPPC4-208ENST00000527680 ZNF609O15014 1411 aa28.45■■■□□ 2.15
TRAPPC4-208ENST00000527680 SPINK5Q9NQ38 1064 aaPredicted RBP28.45■■■□□ 2.14
TRAPPC4-208ENST00000527680 SCAF8Q9UPN6 1271 aaKnown RBP28.45■■■□□ 2.14
TRAPPC4-208ENST00000527680 KIF23Q02241 960 aaPredicted RBP28.44■■■□□ 2.14
TRAPPC4-208ENST00000527680 CHRNDQ07001 517 aa28.44■■■□□ 2.14
TRAPPC4-208ENST00000527680 IFIT5Q13325 482 aaKnown RBP28.44■■■□□ 2.14
TRAPPC4-208ENST00000527680 MYO3BQ8WXR4 1341 aa28.43■■■□□ 2.14
TRAPPC4-208ENST00000527680 CASP8AP2Q9UKL3 1982 aa28.43■■■□□ 2.14
TRAPPC4-208ENST00000527680 FAM155AB1AL88 458 aaPredicted RBP28.43■■■□□ 2.14
TRAPPC4-208ENST00000527680 NBPF9Q3BBW0 867 aa28.43■■■□□ 2.14
TRAPPC4-208ENST00000527680 BEND3Q5T5X7 828 aa28.42■■■□□ 2.14
TRAPPC4-208ENST00000527680 PITPNM2Q9BZ72 1349 aa28.42■■■□□ 2.14
TRAPPC4-208ENST00000527680 CCDC85CA6NKD9 419 aa28.41■■■□□ 2.14
TRAPPC4-208ENST00000527680 KLRK1P26718 216 aa28.41■■■□□ 2.14
TRAPPC4-208ENST00000527680 GTF2IP78347 998 aa28.41■■■□□ 2.14
TRAPPC4-208ENST00000527680 HELBQ8NG08 1087 aaPredicted RBP28.41■■■□□ 2.14
TRAPPC4-208ENST00000527680 TAF5LO75529 589 aa28.4■■■□□ 2.14
TRAPPC4-208ENST00000527680 FOXO4P98177 505 aa28.4■■■□□ 2.14
TRAPPC4-208ENST00000527680 TAF7LQ5H9L4 462 aa28.4■■■□□ 2.14
TRAPPC4-208ENST00000527680 PRAMEF18Q5VWM3 479 aa28.4■■■□□ 2.14
TRAPPC4-208ENST00000527680 SLC4A10Q6U841 1118 aa28.4■■■□□ 2.14
TRAPPC4-208ENST00000527680 C9orf78Q9NZ63 289 aaPredicted RBP28.4■■■□□ 2.14
TRAPPC4-208ENST00000527680 HDAC9Q9UKV0 1011 aa28.4■■■□□ 2.14
TRAPPC4-208ENST00000527680 TTLL12Q14166 644 aaPredicted RBP28.39■■■□□ 2.14
TRAPPC4-208ENST00000527680 LMBR1LQ6UX01 489 aa28.39■■■□□ 2.14
TRAPPC4-208ENST00000527680 KIAA0825Q8IV33 1275 aa28.39■■■□□ 2.14
TRAPPC4-208ENST00000527680 WNT10BO00744 389 aa28.38■■■□□ 2.13
TRAPPC4-208ENST00000527680 FKBP1BP68106 108 aa28.38■■■□□ 2.13
TRAPPC4-208ENST00000527680 CCDC57Q2TAC2 916 aa28.38■■■□□ 2.13
TRAPPC4-208ENST00000527680 CD209Q9NNX6 404 aa28.38■■■□□ 2.13
TRAPPC4-208ENST00000527680 SNAP23O00161 211 aa28.37■■■□□ 2.13
TRAPPC4-208ENST00000527680 PLIN1O60240 522 aa28.37■■■□□ 2.13
TRAPPC4-208ENST00000527680 TRPA1O75762 1119 aa28.37■■■□□ 2.13
TRAPPC4-208ENST00000527680 SLC10A3P09131 477 aa28.37■■■□□ 2.13
TRAPPC4-208ENST00000527680 MMP14P50281 582 aa28.37■■■□□ 2.13
TRAPPC4-208ENST00000527680 GRM8O00222 908 aa28.36■■■□□ 2.13
TRAPPC4-208ENST00000527680 SASH1O94885 1247 aa28.36■■■□□ 2.13
TRAPPC4-208ENST00000527680 NF2P35240 595 aa28.36■■■□□ 2.13
TRAPPC4-208ENST00000527680 UBE2Q2LH0YL09 131 aa28.35■■■□□ 2.13
TRAPPC4-208ENST00000527680 LDHAL6AQ6ZMR3 332 aa28.35■■■□□ 2.13
TRAPPC4-208ENST00000527680 MOB2Q70IA6 237 aa28.35■■■□□ 2.13
TRAPPC4-208ENST00000527680 CSRNP1Q96S65 589 aa28.35■■■□□ 2.13
TRAPPC4-208ENST00000527680 MCOLN1Q9GZU1 580 aa28.35■■■□□ 2.13
TRAPPC4-208ENST00000527680 DGKZQ13574 1117 aa28.34■■■□□ 2.13
TRAPPC4-208ENST00000527680 ZNF594Q96JF6 807 aaPredicted RBP28.34■■■□□ 2.13
TRAPPC4-208ENST00000527680 SRCIN1Q9C0H9 1055 aa28.34■■■□□ 2.13
TRAPPC4-208ENST00000527680 CNNM1Q9NRU3 951 aa28.34■■■□□ 2.13
TRAPPC4-208ENST00000527680 RNF186Q9NXI6 227 aa28.34■■■□□ 2.13
TRAPPC4-208ENST00000527680 EPHA10Q5JZY3 1008 aa28.33■■■□□ 2.13
TRAPPC4-208ENST00000527680 SAGE1Q9NXZ1 904 aa28.33■■■□□ 2.13
TRAPPC4-208ENST00000527680 ALDH1L1O75891 902 aa28.32■■■□□ 2.12
TRAPPC4-208ENST00000527680 ZNF804AQ7Z570 1209 aa28.32■■■□□ 2.12
TRAPPC4-208ENST00000527680 RASAL3Q86YV0 1011 aa28.32■■■□□ 2.12
TRAPPC4-208ENST00000527680 REM2Q8IYK8 340 aaPredicted RBP28.32■■■□□ 2.12
TRAPPC4-208ENST00000527680 AKAP11Q9UKA4 1901 aa28.31■■■□□ 2.12
TRAPPC4-208ENST00000527680 DLGAP5Q15398 846 aa28.31■■■□□ 2.12
TRAPPC4-208ENST00000527680 C15orf52Q6ZUT6 534 aaKnown RBP28.3■■■□□ 2.12
TRAPPC4-208ENST00000527680 APOBEC3FQ8IUX4 373 aaKnown RBP28.3■■■□□ 2.12
TRAPPC4-208ENST00000527680 F8W031 263 aaPredicted RBP28.29■■■□□ 2.12
TRAPPC4-208ENST00000527680 PRKG1Q13976 671 aa28.29■■■□□ 2.12
TRAPPC4-208ENST00000527680 PAPPA2Q9BXP8 1791 aa28.29■■■□□ 2.12
TRAPPC4-208ENST00000527680 ARMC9Q7Z3E5 817 aa28.27■■■□□ 2.12
TRAPPC4-208ENST00000527680 IL1R1P14778 569 aa28.26■■■□□ 2.11
TRAPPC4-208ENST00000527680 CERS5Q8N5B7 392 aa28.26■■■□□ 2.11
TRAPPC4-208ENST00000527680 JAG2Q9Y219 1238 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms