RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 TXNDC11Q6PKC3 985 aa14.22□□□□□ -0.13
CTNND1-217ENST00000527599 CACTIN-AS1Q8N1I8 211 aa14.22□□□□□ -0.13
CTNND1-217ENST00000527599 PMEPA1Q969W9 287 aa14.22□□□□□ -0.13
CTNND1-217ENST00000527599 USP21Q9UK80 565 aa14.22□□□□□ -0.13
CTNND1-217ENST00000527599 LINC01387J3KSC0 135 aa14.21□□□□□ -0.13
CTNND1-217ENST00000527599 CDC27P30260 824 aa14.21□□□□□ -0.13
CTNND1-217ENST00000527599 NRG1Q02297 640 aaPredicted RBP14.21□□□□□ -0.13
CTNND1-217ENST00000527599 IGF2-ASQ6U949 168 aa14.21□□□□□ -0.13
CTNND1-217ENST00000527599 GALNT11Q8NCW6 608 aa14.21□□□□□ -0.13
CTNND1-217ENST00000527599 EPHA1P21709 976 aa14.2□□□□□ -0.14
CTNND1-217ENST00000527599 TXNRD3Q86VQ6 643 aa14.2□□□□□ -0.14
CTNND1-217ENST00000527599 ADAM19Q9H013 955 aa14.2□□□□□ -0.14
CTNND1-217ENST00000527599 BRPF3Q9ULD4 1205 aa14.2□□□□□ -0.14
CTNND1-217ENST00000527599 K7ELQ4 463 aaPredicted RBP14.19□□□□□ -0.14
CTNND1-217ENST00000527599 CDC25BP30305 580 aa14.19□□□□□ -0.14
CTNND1-217ENST00000527599 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
CTNND1-217ENST00000527599 ZFYVE28Q9HCC9 887 aa14.19□□□□□ -0.14
CTNND1-217ENST00000527599 LATS2Q9NRM7 1088 aa14.19□□□□□ -0.14
CTNND1-217ENST00000527599 BRD1O95696 1058 aa14.18□□□□□ -0.14
CTNND1-217ENST00000527599 ITGB7P26010 798 aa14.18□□□□□ -0.14
CTNND1-217ENST00000527599 RSPO4Q2I0M5 234 aaPredicted RBP14.18□□□□□ -0.14
CTNND1-217ENST00000527599 ZKSCAN3Q9BRR0 538 aa14.18□□□□□ -0.14
CTNND1-217ENST00000527599 MUC3BQ9H195 1237 aa14.18□□□□□ -0.14
CTNND1-217ENST00000527599 GNEQ9Y223 722 aaKnown RBP14.18□□□□□ -0.14
CTNND1-217ENST00000527599 SOWAHDA6NJG2 315 aa14.17□□□□□ -0.14
CTNND1-217ENST00000527599 NKAPLQ5M9Q1 402 aa14.17□□□□□ -0.14
CTNND1-217ENST00000527599 PEAR1Q5VY43 1037 aaPredicted RBP14.17□□□□□ -0.14
CTNND1-217ENST00000527599 OSMRQ99650 979 aa14.17□□□□□ -0.14
CTNND1-217ENST00000527599 SRA1Q9HD15 236 aaKnown RBP14.17□□□□□ -0.14
CTNND1-217ENST00000527599 PDE2AO00408 941 aaPredicted RBP14.16□□□□□ -0.14
CTNND1-217ENST00000527599 IGHA2P01877 340 aa14.16□□□□□ -0.14
CTNND1-217ENST00000527599 POLR3DP05423 398 aaPredicted RBP14.16□□□□□ -0.14
CTNND1-217ENST00000527599 PTPRAP18433 802 aa14.16□□□□□ -0.14
CTNND1-217ENST00000527599 NOS3P29474 1203 aa14.16□□□□□ -0.14
CTNND1-217ENST00000527599 WFDC12Q8WWY7 111 aa14.16□□□□□ -0.14
CTNND1-217ENST00000527599 SSBP4Q9BWG4 385 aaPredicted RBP14.16□□□□□ -0.14
CTNND1-217ENST00000527599 MAP4K3Q8IVH8 894 aa14.15□□□□□ -0.14
CTNND1-217ENST00000527599 TMEM102Q8N9M5 508 aaPredicted RBP14.15□□□□□ -0.14
CTNND1-217ENST00000527599 NXPE3Q969Y0 559 aa14.15□□□□□ -0.14
CTNND1-217ENST00000527599 FAM129BQ96TA1 746 aa14.15□□□□□ -0.14
CTNND1-217ENST00000527599 KCNK4Q9NYG8 393 aa14.15□□□□□ -0.14
CTNND1-217ENST00000527599 AMOTL2Q9Y2J4 779 aa14.15□□□□□ -0.14
CTNND1-217ENST00000527599 IREB2P48200 963 aaKnown RBP14.14□□□□□ -0.15
CTNND1-217ENST00000527599 CARD10Q9BWT7 1032 aa14.14□□□□□ -0.15
CTNND1-217ENST00000527599 NDUFB5O43674 189 aa14.13□□□□□ -0.15
CTNND1-217ENST00000527599 USPL1Q5W0Q7 1092 aa14.13□□□□□ -0.15
CTNND1-217ENST00000527599 FSCN2O14926 492 aa14.12□□□□□ -0.15
CTNND1-217ENST00000527599 ALX3O95076 343 aa14.12□□□□□ -0.15
CTNND1-217ENST00000527599 EDN3P14138 238 aa14.12□□□□□ -0.15
CTNND1-217ENST00000527599 FOXD4L6Q3SYB3 417 aaPredicted RBP14.12□□□□□ -0.15
CTNND1-217ENST00000527599 FOXD4L3Q6VB84 417 aaPredicted RBP14.12□□□□□ -0.15
CTNND1-217ENST00000527599 SOX13Q9UN79 622 aa14.12□□□□□ -0.15
CTNND1-217ENST00000527599 SEMA6BQ9H3T3 888 aa14.11□□□□□ -0.15
CTNND1-217ENST00000527599 F8W735 103 aaPredicted RBP14.1□□□□□ -0.15
CTNND1-217ENST00000527599 WISP1O95388 367 aa14.1□□□□□ -0.15
CTNND1-217ENST00000527599 ORC1Q13415 861 aa14.1□□□□□ -0.15
CTNND1-217ENST00000527599 TMEM130Q8N3G9 435 aa14.1□□□□□ -0.15
CTNND1-217ENST00000527599 MEGF10Q96KG7 1140 aa14.1□□□□□ -0.15
CTNND1-217ENST00000527599 MRPL18Q9H0U6 180 aaKnown RBP14.1□□□□□ -0.15
CTNND1-217ENST00000527599 GPR182O15218 404 aa14.09□□□□□ -0.15
CTNND1-217ENST00000527599 HGSNATQ68CP4 663 aa14.09□□□□□ -0.15
CTNND1-217ENST00000527599 ADAM11O75078 769 aa14.08□□□□□ -0.16
CTNND1-217ENST00000527599 CD68P34810 354 aaPredicted RBP14.08□□□□□ -0.16
CTNND1-217ENST00000527599 GALNT12Q8IXK2 581 aa14.08□□□□□ -0.16
CTNND1-217ENST00000527599 KLHDC7BQ96G42 594 aa14.08□□□□□ -0.16
CTNND1-217ENST00000527599 CITED4Q96RK1 184 aa14.08□□□□□ -0.16
CTNND1-217ENST00000527599 BHLHE41Q9C0J9 482 aaPredicted RBP14.08□□□□□ -0.16
CTNND1-217ENST00000527599 AKTIPQ9H8T0 292 aa14.08□□□□□ -0.16
CTNND1-217ENST00000527599 H3BRJ5 948 aa14.07□□□□□ -0.16
CTNND1-217ENST00000527599 DDX3YO15523 660 aaKnown RBP14.07□□□□□ -0.16
CTNND1-217ENST00000527599 VN1R5Q7Z5H4 357 aa14.07□□□□□ -0.16
CTNND1-217ENST00000527599 AGGF1Q8N302 714 aaeCLIP14.07□□□□□ -0.16
CTNND1-217ENST00000527599 A0A1W2PP55 124 aa14.06□□□□□ -0.16
CTNND1-217ENST00000527599 DYRK3O43781 588 aa14.06□□□□□ -0.16
CTNND1-217ENST00000527599 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
CTNND1-217ENST00000527599 FOXD4L4Q8WXT5 416 aaPredicted RBP14.06□□□□□ -0.16
CTNND1-217ENST00000527599 METTL12A8MUP2 240 aa14.05□□□□□ -0.16
CTNND1-217ENST00000527599 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.05□□□□□ -0.16
CTNND1-217ENST00000527599 KLHL23Q8NBE8 558 aa14.05□□□□□ -0.16
CTNND1-217ENST00000527599 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
CTNND1-217ENST00000527599 TP53INP1Q96A56 240 aa14.05□□□□□ -0.16
CTNND1-217ENST00000527599 RBCK1Q9BYM8 510 aa14.05□□□□□ -0.16
CTNND1-217ENST00000527599 NIF3L1Q9GZT8 377 aa14.05□□□□□ -0.16
CTNND1-217ENST00000527599 SEC31BQ9NQW1 1179 aa14.05□□□□□ -0.16
CTNND1-217ENST00000527599 FAM117BQ6P1L5 589 aa14.04□□□□□ -0.16
CTNND1-217ENST00000527599 LOC100996750A0A140TA64 210 aa14.03□□□□□ -0.16
CTNND1-217ENST00000527599 PIP4K2BP78356 416 aa14.03□□□□□ -0.16
CTNND1-217ENST00000527599 Q6ZS46 218 aa14.03□□□□□ -0.16
CTNND1-217ENST00000527599 DZIP1LQ8IYY4 767 aaKnown RBP14.03□□□□□ -0.16
CTNND1-217ENST00000527599 DCAF11Q8TEB1 546 aa14.03□□□□□ -0.16
CTNND1-217ENST00000527599 KRTAP4-6Q9BYQ5 205 aa14.03□□□□□ -0.16
CTNND1-217ENST00000527599 SOX1O00570 391 aaPredicted RBP14.02□□□□□ -0.17
CTNND1-217ENST00000527599 CABP4P57796 275 aa14.02□□□□□ -0.17
CTNND1-217ENST00000527599 KIAA1211Q6ZU35 1233 aa14.02□□□□□ -0.17
CTNND1-217ENST00000527599 TMC1Q8TDI8 760 aa14.02□□□□□ -0.17
CTNND1-217ENST00000527599 ASAP3Q8TDY4 903 aa14.02□□□□□ -0.17
CTNND1-217ENST00000527599 UBASH3BQ8TF42 649 aa14.02□□□□□ -0.17
CTNND1-217ENST00000527599 TCF12Q99081 682 aa14.02□□□□□ -0.17
CTNND1-217ENST00000527599 BIN2Q9UBW5 565 aaPredicted RBP14.02□□□□□ -0.17
CTNND1-217ENST00000527599 FAM177BA6PVY3 158 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms