RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 TXNRD3Q86VQ6 643 aa17.23■□□□□ 0.35
SSSCA1-204ENST00000527413 GMLQ99445 158 aa17.23■□□□□ 0.35
SSSCA1-204ENST00000527413 COA1Q9GZY4 146 aa17.23■□□□□ 0.35
SSSCA1-204ENST00000527413 ZNF408Q9H9D4 720 aa17.23■□□□□ 0.35
SSSCA1-204ENST00000527413 PTPRCP08575 1304 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 FOXN1O15353 648 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 KLRK1P26718 216 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 ECE1P42892 770 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 KRT26Q7Z3Y9 468 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 SAPCD2Q86UD0 394 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 USP48Q86UV5 1035 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 CAPNS2Q96L46 248 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 GGA3Q9NZ52 723 aa17.22■□□□□ 0.35
SSSCA1-204ENST00000527413 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 USP17L8P0C7I0 530 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 KCNJ4P48050 445 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 DACT2Q5SW24 774 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 CYP4F22Q6NT55 531 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
SSSCA1-204ENST00000527413 UTYO14607 1347 aa17.21■□□□□ 0.34
SSSCA1-204ENST00000527413 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.34
SSSCA1-204ENST00000527413 ADM5C9JUS6 153 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 GRM1Q13255 1194 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 DLK2Q6UY11 383 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 FBXW7Q969H0 707 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 SUCLG2Q96I99 432 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 MYOZ2Q9NPC6 264 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 WBP1LQ9NX94 342 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 ARAP2Q8WZ64 1704 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
SSSCA1-204ENST00000527413 TAF5LO75529 589 aa17.19■□□□□ 0.34
SSSCA1-204ENST00000527413 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-204ENST00000527413 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
SSSCA1-204ENST00000527413 TAF7LQ5H9L4 462 aa17.19■□□□□ 0.34
SSSCA1-204ENST00000527413 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-204ENST00000527413 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-204ENST00000527413 HHIPL1Q96JK4 782 aa17.19■□□□□ 0.34
SSSCA1-204ENST00000527413 SNAP23O00161 211 aa17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 ANGEL2Q5VTE6 544 aaKnown RBP17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 C15orf52Q6ZUT6 534 aaKnown RBP17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 SULF1Q8IWU6 871 aa17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 KAZALD1Q96I82 304 aa17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
SSSCA1-204ENST00000527413 CTCFP49711 727 aaPredicted RBP17.17■□□□□ 0.34
SSSCA1-204ENST00000527413 SCARF1Q14162 830 aa17.17■□□□□ 0.34
SSSCA1-204ENST00000527413 TNS4Q8IZW8 715 aa17.17■□□□□ 0.34
SSSCA1-204ENST00000527413 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
SSSCA1-204ENST00000527413 SMC4Q9NTJ3 1288 aa17.17■□□□□ 0.34
SSSCA1-204ENST00000527413 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
SSSCA1-204ENST00000527413 PITPNM2Q9BZ72 1349 aa17.17■□□□□ 0.34
SSSCA1-204ENST00000527413 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
SSSCA1-204ENST00000527413 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
SSSCA1-204ENST00000527413 GBA2Q9HCG7 927 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-204ENST00000527413 CD209Q9NNX6 404 aa17.16■□□□□ 0.34
SSSCA1-204ENST00000527413 AOC2O75106 756 aa17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 HUNKP57058 714 aa17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 GTF2IP78347 998 aa17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 CDCA5Q96FF9 252 aa17.15■□□□□ 0.34
SSSCA1-204ENST00000527413 MYH13Q9UKX3 1938 aa17.14■□□□□ 0.33
SSSCA1-204ENST00000527413 PLIN1O60240 522 aa17.14■□□□□ 0.33
SSSCA1-204ENST00000527413 MAP2K2P36507 400 aa17.14■□□□□ 0.33
SSSCA1-204ENST00000527413 ANKRD44Q8N8A2 993 aa17.14■□□□□ 0.33
SSSCA1-204ENST00000527413 PRDM10Q9NQV6 1147 aa17.14■□□□□ 0.33
SSSCA1-204ENST00000527413 HSPA8P11142 646 aaKnown RBP17.13■□□□□ 0.33
SSSCA1-204ENST00000527413 MMP14P50281 582 aa17.13■□□□□ 0.33
SSSCA1-204ENST00000527413 NBPF9Q3BBW0 867 aa17.13■□□□□ 0.33
SSSCA1-204ENST00000527413 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
SSSCA1-204ENST00000527413 C2orf69Q8N8R5 385 aa17.13■□□□□ 0.33
SSSCA1-204ENST00000527413 PUS3Q9BZE2 481 aaKnown RBP17.13■□□□□ 0.33
SSSCA1-204ENST00000527413 WNT10BO00744 389 aa17.12■□□□□ 0.33
SSSCA1-204ENST00000527413 IL1R1P14778 569 aa17.12■□□□□ 0.33
SSSCA1-204ENST00000527413 LBX1P52954 281 aa17.12■□□□□ 0.33
SSSCA1-204ENST00000527413 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
SSSCA1-204ENST00000527413 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
SSSCA1-204ENST00000527413 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
SSSCA1-204ENST00000527413 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
SSSCA1-204ENST00000527413 SASH1O94885 1247 aa17.11■□□□□ 0.33
SSSCA1-204ENST00000527413 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
SSSCA1-204ENST00000527413 CERS5Q8N5B7 392 aa17.11■□□□□ 0.33
SSSCA1-204ENST00000527413 MROH5Q6ZUA9 1318 aa17.11■□□□□ 0.33
SSSCA1-204ENST00000527413 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
SSSCA1-204ENST00000527413 NOGQ13253 232 aa17.1■□□□□ 0.33
SSSCA1-204ENST00000527413 RGMBQ6NW40 437 aa17.1■□□□□ 0.33
SSSCA1-204ENST00000527413 SCAF8Q9UPN6 1271 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-204ENST00000527413 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
SSSCA1-204ENST00000527413 FKBP1AP62942 108 aaKnown RBP17.09■□□□□ 0.33
SSSCA1-204ENST00000527413 ZBED3Q96IU2 234 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms