RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 HMMRO75330 724 aa13.34□□□□□ -0.27
NEDD8-205ENST00000527046 GYG1P46976 350 aa13.34□□□□□ -0.27
NEDD8-205ENST00000527046 UTRNP46939 3433 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 A0A1B0GUL7 405 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-205ENST00000527046 RAB11FIP3O75154 756 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 BCAMP50895 628 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 PUM3Q15397 648 aaKnown RBP13.33□□□□□ -0.28
NEDD8-205ENST00000527046 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 LPIN2Q92539 896 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
NEDD8-205ENST00000527046 TMX4Q9H1E5 349 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-205ENST00000527046 DBNDD1Q9H9R9 158 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 CD209Q9NNX6 404 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 IL1RAPL2Q9NP60 686 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
NEDD8-205ENST00000527046 ZNF609O15014 1411 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 ZBTB22O15209 634 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 IL1R1P14778 569 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 CXCL9Q07325 125 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 ATP2B3Q16720 1220 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 C16orf71Q8IYS4 520 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-205ENST00000527046 TDRD7Q8NHU6 1098 aaKnown RBP13.32□□□□□ -0.28
NEDD8-205ENST00000527046 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 EYA3Q99504 573 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 TLR7Q9NYK1 1049 aaKnown RBP13.32□□□□□ -0.28
NEDD8-205ENST00000527046 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
NEDD8-205ENST00000527046 ZNRF3Q9ULT6 936 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
NEDD8-205ENST00000527046 APBB1O00213 710 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 ECE2O60344 883 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 PHKA1P46020 1223 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 DBNDD2Q9BQY9 259 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 CCDC8Q9H0W5 538 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-205ENST00000527046 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
NEDD8-205ENST00000527046 PSME4Q14997 1843 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 POTECB2RU33 542 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 HIBADHP31937 336 aaKnown RBP13.3□□□□□ -0.28
NEDD8-205ENST00000527046 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 PODNQ7Z5L7 613 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-205ENST00000527046 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
NEDD8-205ENST00000527046 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
NEDD8-205ENST00000527046 KCNJ4P48050 445 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-205ENST00000527046 SCARF1Q14162 830 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-205ENST00000527046 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 GMLQ99445 158 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 MXD3Q9BW11 206 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
NEDD8-205ENST00000527046 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-205ENST00000527046 DDNO94850 711 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-205ENST00000527046 VIL1P09327 827 aaKnown RBP13.28□□□□□ -0.28
NEDD8-205ENST00000527046 SLC5A1P13866 664 aa13.28□□□□□ -0.28
NEDD8-205ENST00000527046 GRIK5Q16478 980 aa13.28□□□□□ -0.28
NEDD8-205ENST00000527046 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
NEDD8-205ENST00000527046 CERS5Q8N5B7 392 aa13.28□□□□□ -0.28
NEDD8-205ENST00000527046 JDP2Q8WYK2 163 aa13.28□□□□□ -0.28
NEDD8-205ENST00000527046 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
NEDD8-205ENST00000527046 IQSEC3Q9UPP2 1182 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-205ENST00000527046 PSMD14O00487 310 aa13.27□□□□□ -0.29
NEDD8-205ENST00000527046 RAD17O75943 681 aa13.27□□□□□ -0.29
NEDD8-205ENST00000527046 ARID4AP29374 1257 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-205ENST00000527046 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
NEDD8-205ENST00000527046 AACSQ86V21 672 aa13.27□□□□□ -0.29
NEDD8-205ENST00000527046 FAM205AQ6ZU69 1335 aa13.27□□□□□ -0.29
NEDD8-205ENST00000527046 ZC3H4Q9UPT8 1303 aaKnown RBP13.27□□□□□ -0.29
NEDD8-205ENST00000527046 SHTN1A0MZ66 631 aa13.26□□□□□ -0.29
NEDD8-205ENST00000527046 GLTPD2A6NH11 291 aa13.26□□□□□ -0.29
NEDD8-205ENST00000527046 NUCB1Q02818 461 aa13.26□□□□□ -0.29
NEDD8-205ENST00000527046 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
NEDD8-205ENST00000527046 ERICH6BQ5W0A0 696 aa13.26□□□□□ -0.29
NEDD8-205ENST00000527046 PI16Q6UXB8 463 aa13.26□□□□□ -0.29
NEDD8-205ENST00000527046 ZNF804AQ7Z570 1209 aa13.26□□□□□ -0.29
NEDD8-205ENST00000527046 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-205ENST00000527046 PDE4AP27815 886 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 MCAMP43121 646 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 GTF2IP78347 998 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 CAVIN4Q5BKX8 364 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 CIAPIN1Q6FI81 312 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 CLASRPQ8N2M8 674 aaKnown RBP13.25□□□□□ -0.29
NEDD8-205ENST00000527046 HMG20BQ9P0W2 317 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 JAG2Q9Y219 1238 aa13.25□□□□□ -0.29
NEDD8-205ENST00000527046 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms