RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ECE2O60344 883 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 UFL1O94874 794 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 HIRAP54198 1017 aaPredicted RBP15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 SIRT2Q8IXJ6 389 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 SUCLG2Q96I99 432 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 ZC3H12CQ9C0D7 883 aaKnown RBP15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 ANKIB1Q9P2G1 1089 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 PGAP2Q9UHJ9 254 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 GGA1Q9UJY5 639 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 MINPP1Q9UNW1 487 aa15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
SSSCA1-203ENST00000526877 XDHP47989 1333 aa15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 SHTN1A0MZ66 631 aa15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 TMEM88BA6NKF7 163 aa15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 DPF2Q92785 391 aa15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 GCC1Q96CN9 775 aa15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 CNOT7Q9UIV1 285 aaKnown RBP15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 SPEF2Q9C093 1822 aa15.72■□□□□ 0.11
SSSCA1-203ENST00000526877 ATP2B4P23634 1241 aa15.71■□□□□ 0.11
SSSCA1-203ENST00000526877 FOXO4P98177 505 aa15.71■□□□□ 0.11
SSSCA1-203ENST00000526877 BICC1Q9H694 974 aaKnown RBP15.71■□□□□ 0.11
SSSCA1-203ENST00000526877 PCNTO95613 3336 aa15.71■□□□□ 0.1
SSSCA1-203ENST00000526877 SRGAP3O43295 1099 aa15.7■□□□□ 0.1
SSSCA1-203ENST00000526877 VIL1P09327 827 aaKnown RBP15.7■□□□□ 0.1
SSSCA1-203ENST00000526877 ITGA6P23229 1130 aa15.7■□□□□ 0.1
SSSCA1-203ENST00000526877 MTX1Q13505 466 aa15.7■□□□□ 0.1
SSSCA1-203ENST00000526877 SMC5Q8IY18 1101 aa15.7■□□□□ 0.1
SSSCA1-203ENST00000526877 DCTPP1Q9H773 170 aa15.7■□□□□ 0.1
SSSCA1-203ENST00000526877 MKRN1Q9UHC7 482 aaKnown RBP15.7■□□□□ 0.1
SSSCA1-203ENST00000526877 PSME4Q14997 1843 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 PNMA6EA0A0J9YXQ4 647 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 FAM161AQ3B820 660 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 EPHA10Q5JZY3 1008 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 TRPM4Q8TD43 1214 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 SSH3Q8TE77 659 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 ZC3H15Q8WU90 426 aaKnown RBP15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 KAZALD1Q96I82 304 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 ZBTB47Q9UFB7 747 aaPredicted RBP15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 CNTNAP1P78357 1384 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 TRPM7Q96QT4 1865 aa15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 POLR2AP24928 1970 aaKnown RBP15.69■□□□□ 0.1
SSSCA1-203ENST00000526877 H7C1D1 291 aa15.68■□□□□ 0.1
SSSCA1-203ENST00000526877 TRAF5O00463 557 aa15.68■□□□□ 0.1
SSSCA1-203ENST00000526877 RPS12P25398 132 aaKnown RBP15.68■□□□□ 0.1
SSSCA1-203ENST00000526877 POLA2Q14181 598 aa15.68■□□□□ 0.1
SSSCA1-203ENST00000526877 CST9Q5W186 159 aa15.68■□□□□ 0.1
SSSCA1-203ENST00000526877 EGFRP00533 1210 aa15.67■□□□□ 0.1
SSSCA1-203ENST00000526877 IGHMBP2P38935 993 aaKnown RBP15.67■□□□□ 0.1
SSSCA1-203ENST00000526877 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
SSSCA1-203ENST00000526877 SAMD7Q7Z3H4 446 aa15.67■□□□□ 0.1
SSSCA1-203ENST00000526877 TXNRD3Q86VQ6 643 aa15.67■□□□□ 0.1
SSSCA1-203ENST00000526877 MED23Q9ULK4 1368 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 RASSF10A6NK89 507 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 HSP90AB4PQ58FF6 505 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 LMBR1LQ6UX01 489 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 PODNQ7Z5L7 613 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 GMLQ99445 158 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 CHMP3Q9Y3E7 222 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 ZNF609O15014 1411 aa15.66■□□□□ 0.1
SSSCA1-203ENST00000526877 ANKRD18BA2A2Z9 1011 aa15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 G3V3G9 751 aa15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 SURF6O75683 361 aaKnown RBP15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 VEGFBP49765 207 aa15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 DCAF8Q5TAQ9 597 aa15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 ANKRD45Q5TZF3 282 aa15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 MPHOSPH8Q99549 860 aa15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 GLIS2Q9BZE0 524 aaPredicted RBP15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 ANKRD2Q9GZV1 360 aa15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 ZNF646O15015 1829 aaPredicted RBP15.65■□□□□ 0.1
SSSCA1-203ENST00000526877 RAB11FIP3O75154 756 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 ZNF280AP59817 542 aaPredicted RBP15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 NUCB1Q02818 461 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 CHRNDQ07001 517 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 IFIT5Q13325 482 aaKnown RBP15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 DEFB115Q30KQ5 88 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 TBC1D10BQ4KMP7 808 aaPredicted RBP15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 RSBN1LQ6PCB5 846 aaPredicted RBP15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 CDC37L1Q7L3B6 337 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 AGBL3Q8NEM8 1001 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 IRS2Q9Y4H2 1338 aa15.64■□□□□ 0.09
SSSCA1-203ENST00000526877 A0A1B0GUL6 1792 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 USP17L3A6NCW0 530 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 USP17L4A6NCW7 530 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 KLRK1P26718 216 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 OS9Q13438 667 aaPredicted RBP15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 USP17L1Q7RTZ2 530 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 CHD1LQ86WJ1 897 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 COA1Q9GZY4 146 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 EXOC6BQ9Y2D4 811 aa15.63■□□□□ 0.09
SSSCA1-203ENST00000526877 SNAP23O00161 211 aa15.62■□□□□ 0.09
SSSCA1-203ENST00000526877 G3BP1Q13283 466 aaKnown RBP eCLIP15.62■□□□□ 0.09
SSSCA1-203ENST00000526877 CCDC57Q2TAC2 916 aa15.62■□□□□ 0.09
SSSCA1-203ENST00000526877 RBM26Q5T8P6 1007 aaKnown RBP15.62■□□□□ 0.09
SSSCA1-203ENST00000526877 DLK2Q6UY11 383 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms