RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 C15orf52Q6ZUT6 534 aaKnown RBP18.8■□□□□ 0.6
HIF3A-210ENST00000526506 EYA2O00167 538 aa18.79■□□□□ 0.6
HIF3A-210ENST00000526506 RPS12P25398 132 aaKnown RBP18.79■□□□□ 0.6
HIF3A-210ENST00000526506 MTX1Q13505 466 aa18.79■□□□□ 0.6
HIF3A-210ENST00000526506 UBE4AQ14139 1066 aa18.79■□□□□ 0.6
HIF3A-210ENST00000526506 LDHDQ86WU2 507 aa18.79■□□□□ 0.6
HIF3A-210ENST00000526506 PANK1Q8TE04 598 aa18.79■□□□□ 0.6
HIF3A-210ENST00000526506 DPF2Q92785 391 aa18.79■□□□□ 0.6
HIF3A-210ENST00000526506 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
HIF3A-210ENST00000526506 ZBTB12Q9Y330 459 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-210ENST00000526506 IRS2Q9Y4H2 1338 aa18.78■□□□□ 0.6
HIF3A-210ENST00000526506 VIL1P09327 827 aaKnown RBP18.78■□□□□ 0.6
HIF3A-210ENST00000526506 POTEIP0CG38 1075 aa18.78■□□□□ 0.6
HIF3A-210ENST00000526506 POTEJP0CG39 1038 aa18.78■□□□□ 0.6
HIF3A-210ENST00000526506 SCN9AQ15858 1988 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 USP17L3A6NCW0 530 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 USP17L4A6NCW7 530 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 SRGAP3O43295 1099 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 CIAO1O76071 339 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 CHADLQ6NUI6 762 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.6
HIF3A-210ENST00000526506 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 ZNF804AQ7Z570 1209 aa18.77■□□□□ 0.6
HIF3A-210ENST00000526506 ADARB2Q9NS39 739 aaKnown RBP18.77■□□□□ 0.6
HIF3A-210ENST00000526506 CNOT7Q9UIV1 285 aaKnown RBP18.77■□□□□ 0.6
HIF3A-210ENST00000526506 ZBTB7BO15156 539 aaPredicted RBP18.76■□□□□ 0.59
HIF3A-210ENST00000526506 PDE8BO95263 885 aa18.76■□□□□ 0.59
HIF3A-210ENST00000526506 RSBN1LQ6PCB5 846 aaPredicted RBP18.76■□□□□ 0.59
HIF3A-210ENST00000526506 MICALL2Q8IY33 904 aa18.76■□□□□ 0.59
HIF3A-210ENST00000526506 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
HIF3A-210ENST00000526506 SIL1Q9H173 461 aa18.76■□□□□ 0.59
HIF3A-210ENST00000526506 COPRSQ9NQ92 184 aa18.76■□□□□ 0.59
HIF3A-210ENST00000526506 CLEC11AQ9Y240 323 aa18.76■□□□□ 0.59
HIF3A-210ENST00000526506 ZNF609O15014 1411 aa18.75■□□□□ 0.59
HIF3A-210ENST00000526506 H7C1D1 291 aa18.75■□□□□ 0.59
HIF3A-210ENST00000526506 HSPA6P17066 643 aa18.75■□□□□ 0.59
HIF3A-210ENST00000526506 STRIP1Q5VSL9 837 aa18.75■□□□□ 0.59
HIF3A-210ENST00000526506 ATG9AQ7Z3C6 839 aa18.75■□□□□ 0.59
HIF3A-210ENST00000526506 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
HIF3A-210ENST00000526506 AGBL3Q8NEM8 1001 aa18.75■□□□□ 0.59
HIF3A-210ENST00000526506 CD209Q9NNX6 404 aa18.75■□□□□ 0.59
HIF3A-210ENST00000526506 PA2G4Q9UQ80 394 aaKnown RBP18.75■□□□□ 0.59
HIF3A-210ENST00000526506 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
HIF3A-210ENST00000526506 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
HIF3A-210ENST00000526506 PUM3Q15397 648 aaKnown RBP18.74■□□□□ 0.59
HIF3A-210ENST00000526506 FBXW7Q969H0 707 aa18.74■□□□□ 0.59
HIF3A-210ENST00000526506 PSME4Q14997 1843 aa18.74■□□□□ 0.59
HIF3A-210ENST00000526506 SHTN1A0MZ66 631 aa18.73■□□□□ 0.59
HIF3A-210ENST00000526506 IL1R1P14778 569 aa18.73■□□□□ 0.59
HIF3A-210ENST00000526506 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
HIF3A-210ENST00000526506 DACT2Q5SW24 774 aa18.73■□□□□ 0.59
HIF3A-210ENST00000526506 TTLL5Q6EMB2 1281 aa18.73■□□□□ 0.59
HIF3A-210ENST00000526506 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
HIF3A-210ENST00000526506 MYO3BQ8WXR4 1341 aa18.73■□□□□ 0.59
HIF3A-210ENST00000526506 PNMA6EA0A0J9YXQ4 647 aa18.72■□□□□ 0.59
HIF3A-210ENST00000526506 HIBADHP31937 336 aaKnown RBP18.72■□□□□ 0.59
HIF3A-210ENST00000526506 GYG1P46976 350 aa18.72■□□□□ 0.59
HIF3A-210ENST00000526506 GMLQ99445 158 aa18.72■□□□□ 0.59
HIF3A-210ENST00000526506 CEP126Q9P2H0 1117 aa18.72■□□□□ 0.59
HIF3A-210ENST00000526506 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
HIF3A-210ENST00000526506 IFIT1P09914 478 aaKnown RBP18.71■□□□□ 0.59
HIF3A-210ENST00000526506 FGFR2P21802 821 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 GTF2IP78347 998 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 PDE3AQ14432 1141 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 CAVIN4Q5BKX8 364 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 VPS37DQ86XT2 251 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 TRPM4Q8TD43 1214 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 LPIN2Q92539 896 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 FAM84BQ96KN1 310 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-210ENST00000526506 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
HIF3A-210ENST00000526506 USP17L8P0C7I0 530 aa18.7■□□□□ 0.58
HIF3A-210ENST00000526506 SLC5A1P13866 664 aa18.7■□□□□ 0.58
HIF3A-210ENST00000526506 ZNF280AP59817 542 aaPredicted RBP18.7■□□□□ 0.58
HIF3A-210ENST00000526506 MAP1SQ66K74 1059 aaPredicted RBP18.7■□□□□ 0.58
HIF3A-210ENST00000526506 SAMD7Q7Z3H4 446 aa18.7■□□□□ 0.58
HIF3A-210ENST00000526506 MXD3Q9BW11 206 aa18.7■□□□□ 0.58
HIF3A-210ENST00000526506 SASH1O94885 1247 aa18.69■□□□□ 0.58
HIF3A-210ENST00000526506 APLP1P51693 650 aa18.69■□□□□ 0.58
HIF3A-210ENST00000526506 HIRAP54198 1017 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-210ENST00000526506 ATP8B2P98198 1209 aa18.69■□□□□ 0.58
HIF3A-210ENST00000526506 POLA2Q14181 598 aa18.69■□□□□ 0.58
HIF3A-210ENST00000526506 TBC1D10BQ4KMP7 808 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-210ENST00000526506 FBXO33Q7Z6M2 555 aa18.69■□□□□ 0.58
HIF3A-210ENST00000526506 CNTROBQ8N137 903 aa18.69■□□□□ 0.58
HIF3A-210ENST00000526506 TDRD7Q8NHU6 1098 aaKnown RBP18.69■□□□□ 0.58
HIF3A-210ENST00000526506 ZC3H15Q8WU90 426 aaKnown RBP18.69■□□□□ 0.58
HIF3A-210ENST00000526506 CHMP4BQ9H444 224 aaKnown RBP18.69■□□□□ 0.58
HIF3A-210ENST00000526506 ATP2B3Q16720 1220 aa18.68■□□□□ 0.58
HIF3A-210ENST00000526506 KIF4BQ2VIQ3 1234 aa18.68■□□□□ 0.58
HIF3A-210ENST00000526506 OGFOD1Q8N543 542 aa18.68■□□□□ 0.58
HIF3A-210ENST00000526506 SSH3Q8TE77 659 aa18.68■□□□□ 0.58
HIF3A-210ENST00000526506 ZNF646O15015 1829 aaPredicted RBP18.67■□□□□ 0.58
HIF3A-210ENST00000526506 ITGBL1O95965 494 aaPredicted RBP18.67■□□□□ 0.58
HIF3A-210ENST00000526506 EGFRP00533 1210 aa18.67■□□□□ 0.58
HIF3A-210ENST00000526506 G3BP1Q13283 466 aaKnown RBP eCLIP18.67■□□□□ 0.58
HIF3A-210ENST00000526506 RBM26Q5T8P6 1007 aaKnown RBP18.67■□□□□ 0.58
HIF3A-210ENST00000526506 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
HIF3A-210ENST00000526506 PGAP2Q9UHJ9 254 aa18.67■□□□□ 0.58
HIF3A-210ENST00000526506 FAM205AQ6ZU69 1335 aa18.67■□□□□ 0.58
HIF3A-210ENST00000526506 MMP14P50281 582 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms