RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 CDC25BP30305 580 aa10.47□□□□□ -0.73
COPB1-204ENST00000526191 NRG1Q02297 640 aaPredicted RBP10.47□□□□□ -0.73
COPB1-204ENST00000526191 TXNRD3Q86VQ6 643 aa10.47□□□□□ -0.73
COPB1-204ENST00000526191 SH2B1Q9NRF2 756 aaPredicted RBP10.47□□□□□ -0.73
COPB1-204ENST00000526191 DZANK1Q9NVP4 752 aa10.47□□□□□ -0.73
COPB1-204ENST00000526191 PPME1Q9Y570 386 aa10.47□□□□□ -0.73
COPB1-204ENST00000526191 NFKBIEO00221 500 aa10.46□□□□□ -0.73
COPB1-204ENST00000526191 CACTIN-AS1Q8N1I8 211 aa10.46□□□□□ -0.73
COPB1-204ENST00000526191 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.73
COPB1-204ENST00000526191 EPHA1P21709 976 aa10.45□□□□□ -0.74
COPB1-204ENST00000526191 RSPO4Q2I0M5 234 aaPredicted RBP10.45□□□□□ -0.74
COPB1-204ENST00000526191 IGF2-ASQ6U949 168 aa10.45□□□□□ -0.74
COPB1-204ENST00000526191 PMEPA1Q969W9 287 aa10.45□□□□□ -0.74
COPB1-204ENST00000526191 PTPRAP18433 802 aa10.44□□□□□ -0.74
COPB1-204ENST00000526191 GALNT11Q8NCW6 608 aa10.44□□□□□ -0.74
COPB1-204ENST00000526191 CCER1Q8TC90 406 aaPredicted RBP10.44□□□□□ -0.74
COPB1-204ENST00000526191 MUC3BQ9H195 1237 aa10.44□□□□□ -0.74
COPB1-204ENST00000526191 WFDC12Q8WWY7 111 aa10.43□□□□□ -0.74
COPB1-204ENST00000526191 ZKSCAN3Q9BRR0 538 aa10.43□□□□□ -0.74
COPB1-204ENST00000526191 CARD10Q9BWT7 1032 aa10.43□□□□□ -0.74
COPB1-204ENST00000526191 ADAM19Q9H013 955 aa10.43□□□□□ -0.74
COPB1-204ENST00000526191 SRA1Q9HD15 236 aaKnown RBP10.43□□□□□ -0.74
COPB1-204ENST00000526191 LATS2Q9NRM7 1088 aa10.43□□□□□ -0.74
COPB1-204ENST00000526191 PDE2AO00408 941 aaPredicted RBP10.42□□□□□ -0.74
COPB1-204ENST00000526191 POLR3DP05423 398 aaPredicted RBP10.42□□□□□ -0.74
COPB1-204ENST00000526191 NOS3P29474 1203 aa10.42□□□□□ -0.74
COPB1-204ENST00000526191 IREB2P48200 963 aaKnown RBP10.42□□□□□ -0.74
COPB1-204ENST00000526191 NKAPLQ5M9Q1 402 aa10.42□□□□□ -0.74
COPB1-204ENST00000526191 MAP4K3Q8IVH8 894 aa10.42□□□□□ -0.74
COPB1-204ENST00000526191 OSMRQ99650 979 aa10.42□□□□□ -0.74
COPB1-204ENST00000526191 ZFYVE28Q9HCC9 887 aa10.42□□□□□ -0.74
COPB1-204ENST00000526191 AMOTL2Q9Y2J4 779 aa10.42□□□□□ -0.74
COPB1-204ENST00000526191 NDUFB5O43674 189 aa10.41□□□□□ -0.74
COPB1-204ENST00000526191 ITGB7P26010 798 aa10.41□□□□□ -0.74
COPB1-204ENST00000526191 SEMA6BQ9H3T3 888 aa10.41□□□□□ -0.74
COPB1-204ENST00000526191 TM4SF5O14894 197 aa10.4□□□□□ -0.74
COPB1-204ENST00000526191 ALX3O95076 343 aa10.4□□□□□ -0.74
COPB1-204ENST00000526191 EDN3P14138 238 aa10.4□□□□□ -0.74
COPB1-204ENST00000526191 FOXD4L6Q3SYB3 417 aaPredicted RBP10.4□□□□□ -0.74
COPB1-204ENST00000526191 PEAR1Q5VY43 1037 aaPredicted RBP10.4□□□□□ -0.74
COPB1-204ENST00000526191 FOXD4L3Q6VB84 417 aaPredicted RBP10.4□□□□□ -0.74
COPB1-204ENST00000526191 SSBP4Q9BWG4 385 aaPredicted RBP10.4□□□□□ -0.74
COPB1-204ENST00000526191 KCNK4Q9NYG8 393 aa10.4□□□□□ -0.74
COPB1-204ENST00000526191 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
COPB1-204ENST00000526191 FSCN2O14926 492 aa10.39□□□□□ -0.75
COPB1-204ENST00000526191 BRD1O95696 1058 aa10.39□□□□□ -0.75
COPB1-204ENST00000526191 TMEM102Q8N9M5 508 aaPredicted RBP10.39□□□□□ -0.75
COPB1-204ENST00000526191 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
COPB1-204ENST00000526191 MEGF10Q96KG7 1140 aa10.39□□□□□ -0.75
COPB1-204ENST00000526191 FAM129BQ96TA1 746 aa10.39□□□□□ -0.75
COPB1-204ENST00000526191 MRPL18Q9H0U6 180 aaKnown RBP10.39□□□□□ -0.75
COPB1-204ENST00000526191 USPL1Q5W0Q7 1092 aa10.38□□□□□ -0.75
COPB1-204ENST00000526191 TP53INP1Q96A56 240 aa10.38□□□□□ -0.75
COPB1-204ENST00000526191 SOX13Q9UN79 622 aa10.38□□□□□ -0.75
COPB1-204ENST00000526191 GNEQ9Y223 722 aaKnown RBP10.38□□□□□ -0.75
COPB1-204ENST00000526191 FAM177BA6PVY3 158 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 F8W735 103 aaPredicted RBP10.37□□□□□ -0.75
COPB1-204ENST00000526191 H3BRJ5 948 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 DYRK3O43781 588 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 WISP1O95388 367 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 CD68P34810 354 aaPredicted RBP10.37□□□□□ -0.75
COPB1-204ENST00000526191 ORC1Q13415 861 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 FAM117BQ6P1L5 589 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 AGGF1Q8N302 714 aaeCLIP10.37□□□□□ -0.75
COPB1-204ENST00000526191 KLHDC7BQ96G42 594 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 AKTIPQ9H8T0 292 aa10.37□□□□□ -0.75
COPB1-204ENST00000526191 DDX3YO15523 660 aaKnown RBP10.36□□□□□ -0.75
COPB1-204ENST00000526191 IGHA2P01877 340 aa10.36□□□□□ -0.75
COPB1-204ENST00000526191 HGSNATQ68CP4 663 aa10.36□□□□□ -0.75
COPB1-204ENST00000526191 GPR182O15218 404 aa10.35□□□□□ -0.75
COPB1-204ENST00000526191 CABP4P57796 275 aa10.35□□□□□ -0.75
COPB1-204ENST00000526191 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
COPB1-204ENST00000526191 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.35□□□□□ -0.75
COPB1-204ENST00000526191 TMEM130Q8N3G9 435 aa10.35□□□□□ -0.75
COPB1-204ENST00000526191 DCAF11Q8TEB1 546 aa10.35□□□□□ -0.75
COPB1-204ENST00000526191 SEC31BQ9NQW1 1179 aa10.35□□□□□ -0.75
COPB1-204ENST00000526191 METTL12A8MUP2 240 aa10.34□□□□□ -0.75
COPB1-204ENST00000526191 ADAM11O75078 769 aa10.34□□□□□ -0.75
COPB1-204ENST00000526191 GALNT12Q8IXK2 581 aa10.34□□□□□ -0.75
COPB1-204ENST00000526191 KLHL23Q8NBE8 558 aa10.34□□□□□ -0.75
COPB1-204ENST00000526191 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
COPB1-204ENST00000526191 FOXD4L4Q8WXT5 416 aaPredicted RBP10.34□□□□□ -0.75
COPB1-204ENST00000526191 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
COPB1-204ENST00000526191 CITED4Q96RK1 184 aa10.34□□□□□ -0.75
COPB1-204ENST00000526191 BHLHE41Q9C0J9 482 aaPredicted RBP10.34□□□□□ -0.75
COPB1-204ENST00000526191 PIP4K2BP78356 416 aa10.33□□□□□ -0.76
COPB1-204ENST00000526191 ACAD11Q709F0 780 aa10.33□□□□□ -0.76
COPB1-204ENST00000526191 VN1R5Q7Z5H4 357 aa10.33□□□□□ -0.76
COPB1-204ENST00000526191 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
COPB1-204ENST00000526191 BSNDQ8WZ55 320 aa10.33□□□□□ -0.76
COPB1-204ENST00000526191 NIF3L1Q9GZT8 377 aa10.33□□□□□ -0.76
COPB1-204ENST00000526191 BIN2Q9UBW5 565 aaPredicted RBP10.33□□□□□ -0.76
COPB1-204ENST00000526191 LOC100996750A0A140TA64 210 aa10.32□□□□□ -0.76
COPB1-204ENST00000526191 A0A1W2PP55 124 aa10.32□□□□□ -0.76
COPB1-204ENST00000526191 UBASH3BQ8TF42 649 aa10.32□□□□□ -0.76
COPB1-204ENST00000526191 KRTAP4-6Q9BYQ5 205 aa10.32□□□□□ -0.76
COPB1-204ENST00000526191 Q6ZS46 218 aa10.31□□□□□ -0.76
COPB1-204ENST00000526191 WNT8BQ93098 351 aa10.31□□□□□ -0.76
COPB1-204ENST00000526191 RBCK1Q9BYM8 510 aa10.31□□□□□ -0.76
COPB1-204ENST00000526191 SOX1O00570 391 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms