RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 LDHDQ86WU2 507 aa28.03■■■□□ 2.08
CKLF-206ENST00000526149 HDAC5Q9UQL6 1122 aa28.03■■■□□ 2.08
CKLF-206ENST00000526149 DPF2Q92785 391 aa28.02■■■□□ 2.08
CKLF-206ENST00000526149 CNOT7Q9UIV1 285 aaKnown RBP28.02■■■□□ 2.08
CKLF-206ENST00000526149 RCAN3Q9UKA8 241 aa28.02■■■□□ 2.08
CKLF-206ENST00000526149 MROH5Q6ZUA9 1318 aa28.01■■■□□ 2.07
CKLF-206ENST00000526149 VGLL2Q8N8G2 317 aa28.01■■■□□ 2.07
CKLF-206ENST00000526149 USP50Q70EL3 339 aaPredicted RBP28■■■□□ 2.07
CKLF-206ENST00000526149 ADARB2Q9NS39 739 aaKnown RBP28■■■□□ 2.07
CKLF-206ENST00000526149 USP17L3A6NCW0 530 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 USP17L4A6NCW7 530 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 EYA2O00167 538 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 RPS12P25398 132 aaKnown RBP27.99■■■□□ 2.07
CKLF-206ENST00000526149 UBE4AQ14139 1066 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 USP17L1Q7RTZ2 530 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 ATG9AQ7Z3C6 839 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 MICALL2Q8IY33 904 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 FTSJ3Q8IY81 847 aaKnown RBP27.99■■■□□ 2.07
CKLF-206ENST00000526149 CD209Q9NNX6 404 aa27.99■■■□□ 2.07
CKLF-206ENST00000526149 HIRAP54198 1017 aaPredicted RBP27.98■■■□□ 2.07
CKLF-206ENST00000526149 MTX1Q13505 466 aa27.98■■■□□ 2.07
CKLF-206ENST00000526149 METTL24Q5JXM2 366 aa27.98■■■□□ 2.07
CKLF-206ENST00000526149 RSBN1LQ6PCB5 846 aaPredicted RBP27.98■■■□□ 2.07
CKLF-206ENST00000526149 GMLQ99445 158 aa27.98■■■□□ 2.07
CKLF-206ENST00000526149 CLEC11AQ9Y240 323 aa27.98■■■□□ 2.07
CKLF-206ENST00000526149 ZBTB7BO15156 539 aaPredicted RBP27.97■■■□□ 2.07
CKLF-206ENST00000526149 GNAI2P04899 355 aa27.97■■■□□ 2.07
CKLF-206ENST00000526149 DACT2Q5SW24 774 aa27.97■■■□□ 2.07
CKLF-206ENST00000526149 TRPM4Q8TD43 1214 aa27.97■■■□□ 2.07
CKLF-206ENST00000526149 PANK1Q8TE04 598 aa27.97■■■□□ 2.07
CKLF-206ENST00000526149 PA2G4Q9UQ80 394 aaKnown RBP27.97■■■□□ 2.07
CKLF-206ENST00000526149 PSME4Q14997 1843 aa27.97■■■□□ 2.07
CKLF-206ENST00000526149 ZNF609O15014 1411 aa27.96■■■□□ 2.07
CKLF-206ENST00000526149 PDE8BO95263 885 aa27.96■■■□□ 2.07
CKLF-206ENST00000526149 MXD3Q9BW11 206 aa27.96■■■□□ 2.07
CKLF-206ENST00000526149 ZNF646O15015 1829 aaPredicted RBP27.95■■■□□ 2.07
CKLF-206ENST00000526149 H7C1D1 291 aa27.95■■■□□ 2.06
CKLF-206ENST00000526149 ITGBL1O95965 494 aaPredicted RBP27.95■■■□□ 2.06
CKLF-206ENST00000526149 EGFRP00533 1210 aa27.95■■■□□ 2.06
CKLF-206ENST00000526149 STRIP1Q5VSL9 837 aa27.95■■■□□ 2.06
CKLF-206ENST00000526149 MAP1SQ66K74 1059 aaPredicted RBP27.95■■■□□ 2.06
CKLF-206ENST00000526149 ITPRIPQ8IWB1 547 aa27.95■■■□□ 2.06
CKLF-206ENST00000526149 AGBL3Q8NEM8 1001 aa27.95■■■□□ 2.06
CKLF-206ENST00000526149 YTHDC1Q96MU7 727 aaKnown RBP27.95■■■□□ 2.06
CKLF-206ENST00000526149 COPRSQ9NQ92 184 aa27.95■■■□□ 2.06
CKLF-206ENST00000526149 IL1R1P14778 569 aa27.94■■■□□ 2.06
CKLF-206ENST00000526149 SAMD7Q7Z3H4 446 aa27.94■■■□□ 2.06
CKLF-206ENST00000526149 FAM84BQ96KN1 310 aaPredicted RBP27.94■■■□□ 2.06
CKLF-206ENST00000526149 SIL1Q9H173 461 aa27.94■■■□□ 2.06
CKLF-206ENST00000526149 SRGAP3O43295 1099 aa27.93■■■□□ 2.06
CKLF-206ENST00000526149 CIAO1O76071 339 aa27.93■■■□□ 2.06
CKLF-206ENST00000526149 FGFR2P21802 821 aa27.93■■■□□ 2.06
CKLF-206ENST00000526149 GYG1P46976 350 aa27.93■■■□□ 2.06
CKLF-206ENST00000526149 FBXO3Q9UK99 471 aa27.93■■■□□ 2.06
CKLF-206ENST00000526149 PASKQ96RG2 1323 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 PNMA6EA0A0J9YXQ4 647 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 APLP1P51693 650 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 GTF2IP78347 998 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 TTLL5Q6EMB2 1281 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 ZNF804AQ7Z570 1209 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 CNTROBQ8N137 903 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 PGAP2Q9UHJ9 254 aa27.92■■■□□ 2.06
CKLF-206ENST00000526149 ZNF280AP59817 542 aaPredicted RBP27.91■■■□□ 2.06
CKLF-206ENST00000526149 HTRA3P83110 453 aa27.91■■■□□ 2.06
CKLF-206ENST00000526149 TBC1D10BQ4KMP7 808 aaPredicted RBP27.91■■■□□ 2.06
CKLF-206ENST00000526149 FBXW7Q969H0 707 aa27.91■■■□□ 2.06
CKLF-206ENST00000526149 C1orf115Q9H7X2 142 aa27.9■■■□□ 2.06
CKLF-206ENST00000526149 HIBADHP31937 336 aaKnown RBP27.89■■■□□ 2.06
CKLF-206ENST00000526149 FBXO33Q7Z6M2 555 aa27.89■■■□□ 2.06
CKLF-206ENST00000526149 TDRD7Q8NHU6 1098 aaKnown RBP27.89■■■□□ 2.06
CKLF-206ENST00000526149 PUM3Q15397 648 aaKnown RBP27.88■■■□□ 2.05
CKLF-206ENST00000526149 RBM26Q5T8P6 1007 aaKnown RBP27.88■■■□□ 2.05
CKLF-206ENST00000526149 CERS5Q8N5B7 392 aa27.88■■■□□ 2.05
CKLF-206ENST00000526149 USP17L8P0C7I0 530 aa27.87■■■□□ 2.05
CKLF-206ENST00000526149 MS4A1P11836 297 aa27.87■■■□□ 2.05
CKLF-206ENST00000526149 IL15P40933 162 aaPredicted RBP27.87■■■□□ 2.05
CKLF-206ENST00000526149 ATP8B2P98198 1209 aa27.87■■■□□ 2.05
CKLF-206ENST00000526149 ZC3H15Q8WU90 426 aaKnown RBP27.87■■■□□ 2.05
CKLF-206ENST00000526149 FMR1Q06787 632 aaKnown RBP eCLIP27.86■■■□□ 2.05
CKLF-206ENST00000526149 POLA2Q14181 598 aa27.86■■■□□ 2.05
CKLF-206ENST00000526149 CEP126Q9P2H0 1117 aa27.86■■■□□ 2.05
CKLF-206ENST00000526149 MYO3BQ8WXR4 1341 aa27.86■■■□□ 2.05
CKLF-206ENST00000526149 SASH1O94885 1247 aa27.85■■■□□ 2.05
CKLF-206ENST00000526149 MVPQ14764 893 aaKnown RBP27.85■■■□□ 2.05
CKLF-206ENST00000526149 KIF4BQ2VIQ3 1234 aa27.85■■■□□ 2.05
CKLF-206ENST00000526149 C20orf194Q5TEA3 1177 aa27.85■■■□□ 2.05
CKLF-206ENST00000526149 JAG2Q9Y219 1238 aa27.85■■■□□ 2.05
CKLF-206ENST00000526149 COG6Q9Y2V7 657 aa27.85■■■□□ 2.05
CKLF-206ENST00000526149 BCAMP50895 628 aa27.84■■■□□ 2.05
CKLF-206ENST00000526149 DNAJC5GQ8N7S2 189 aa27.84■■■□□ 2.05
CKLF-206ENST00000526149 LPIN2Q92539 896 aa27.84■■■□□ 2.05
CKLF-206ENST00000526149 MYOZ2Q9NPC6 264 aa27.84■■■□□ 2.05
CKLF-206ENST00000526149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.84■■■□□ 2.05
CKLF-206ENST00000526149 ASTN2O75129 1339 aaPredicted RBP27.84■■■□□ 2.05
CKLF-206ENST00000526149 FAM205AQ6ZU69 1335 aa27.84■■■□□ 2.05
CKLF-206ENST00000526149 IFIT1P09914 478 aaKnown RBP27.83■■■□□ 2.05
CKLF-206ENST00000526149 SSH3Q8TE77 659 aa27.83■■■□□ 2.05
CKLF-206ENST00000526149 CEP350Q5VT06 3117 aa27.83■■■□□ 2.05
CKLF-206ENST00000526149 TRAF5O00463 557 aa27.82■■■□□ 2.04
CKLF-206ENST00000526149 ATP2B3Q16720 1220 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms