RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MPHOSPH8Q99549 860 aa15.32■□□□□ 0.04
SSBP3-210ENST00000525990 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
SSBP3-210ENST00000525990 ANKRD18BA2A2Z9 1011 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 AOC2O75106 756 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 KRT26Q7Z3Y9 468 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 KAZALD1Q96I82 304 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 WBP1LQ9NX94 342 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 ZNF804BA4D1E1 1349 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 ECM29Q5VYK3 1845 aa15.31■□□□□ 0.04
SSBP3-210ENST00000525990 USP17L3A6NCW0 530 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 USP17L4A6NCW7 530 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 ZNF280AP59817 542 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-210ENST00000525990 USP17L1Q7RTZ2 530 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 PODNQ7Z5L7 613 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 IRS2Q9Y4H2 1338 aa15.3■□□□□ 0.04
SSBP3-210ENST00000525990 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
SSBP3-210ENST00000525990 E9PSI1 815 aa15.29■□□□□ 0.04
SSBP3-210ENST00000525990 NBPF7P0C2Y1 421 aaPredicted RBP15.29■□□□□ 0.04
SSBP3-210ENST00000525990 IFIT5Q13325 482 aaKnown RBP15.29■□□□□ 0.04
SSBP3-210ENST00000525990 DACT2Q5SW24 774 aa15.29■□□□□ 0.04
SSBP3-210ENST00000525990 TNS4Q8IZW8 715 aa15.29■□□□□ 0.04
SSBP3-210ENST00000525990 SRCIN1Q9C0H9 1055 aa15.29■□□□□ 0.04
SSBP3-210ENST00000525990 C9orf78Q9NZ63 289 aaPredicted RBP15.29■□□□□ 0.04
SSBP3-210ENST00000525990 LEMD3Q9Y2U8 911 aa15.29■□□□□ 0.04
SSBP3-210ENST00000525990 ALDH1L1O75891 902 aa15.28■□□□□ 0.04
SSBP3-210ENST00000525990 USP17L8P0C7I0 530 aa15.28■□□□□ 0.04
SSBP3-210ENST00000525990 SCARF1Q14162 830 aa15.28■□□□□ 0.04
SSBP3-210ENST00000525990 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
SSBP3-210ENST00000525990 DCPSQ96C86 337 aaKnown RBP15.28■□□□□ 0.04
SSBP3-210ENST00000525990 ZIC5Q96T25 663 aa15.28■□□□□ 0.04
SSBP3-210ENST00000525990 ANKRD2Q9GZV1 360 aa15.28■□□□□ 0.04
SSBP3-210ENST00000525990 COA1Q9GZY4 146 aa15.28■□□□□ 0.04
SSBP3-210ENST00000525990 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
SSBP3-210ENST00000525990 CAPN15O75808 1086 aa15.27■□□□□ 0.04
SSBP3-210ENST00000525990 KCNJ4P48050 445 aa15.27■□□□□ 0.04
SSBP3-210ENST00000525990 LBX1P52954 281 aa15.27■□□□□ 0.04
SSBP3-210ENST00000525990 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
SSBP3-210ENST00000525990 PLIN1O60240 522 aa15.26■□□□□ 0.03
SSBP3-210ENST00000525990 HSPA8P11142 646 aaKnown RBP15.26■□□□□ 0.03
SSBP3-210ENST00000525990 GTF2IP78347 998 aa15.26■□□□□ 0.03
SSBP3-210ENST00000525990 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
SSBP3-210ENST00000525990 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
SSBP3-210ENST00000525990 BICC1Q9H694 974 aaKnown RBP15.26■□□□□ 0.03
SSBP3-210ENST00000525990 TSKSQ9UJT2 592 aa15.26■□□□□ 0.03
SSBP3-210ENST00000525990 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 UTYO14607 1347 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 SASH1O94885 1247 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 ECE1P42892 770 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 CTCFP49711 727 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-210ENST00000525990 HUNKP57058 714 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 CCDC57Q2TAC2 916 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 STRIP1Q5VSL9 837 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 PRAMEF18Q5VWM3 479 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 LDHAL6AQ6ZMR3 332 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 TRMT2AQ8IZ69 625 aaKnown RBP15.25■□□□□ 0.03
SSBP3-210ENST00000525990 CDCA5Q96FF9 252 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 GBA2Q9HCG7 927 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-210ENST00000525990 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 JAG2Q9Y219 1238 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 PAPPA2Q9BXP8 1791 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
SSBP3-210ENST00000525990 TAF7LQ5H9L4 462 aa15.24■□□□□ 0.03
SSBP3-210ENST00000525990 TTLL5Q6EMB2 1281 aa15.24■□□□□ 0.03
SSBP3-210ENST00000525990 SULF1Q8IWU6 871 aa15.24■□□□□ 0.03
SSBP3-210ENST00000525990 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
SSBP3-210ENST00000525990 ANKRD44Q8N8A2 993 aa15.24■□□□□ 0.03
SSBP3-210ENST00000525990 CNNM1Q9NRU3 951 aa15.24■□□□□ 0.03
SSBP3-210ENST00000525990 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
SSBP3-210ENST00000525990 AKAP11Q9UKA4 1901 aa15.23■□□□□ 0.03
SSBP3-210ENST00000525990 PTPRCP08575 1304 aa15.23■□□□□ 0.03
SSBP3-210ENST00000525990 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-210ENST00000525990 KLHDC4Q8TBB5 520 aa15.23■□□□□ 0.03
SSBP3-210ENST00000525990 HHIPL1Q96JK4 782 aa15.23■□□□□ 0.03
SSBP3-210ENST00000525990 FAM155AB1AL88 458 aaPredicted RBP15.22■□□□□ 0.03
SSBP3-210ENST00000525990 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
SSBP3-210ENST00000525990 WNT10BO00744 389 aa15.22■□□□□ 0.03
SSBP3-210ENST00000525990 LRRC24Q50LG9 513 aa15.22■□□□□ 0.03
SSBP3-210ENST00000525990 MOB2Q70IA6 237 aa15.22■□□□□ 0.03
SSBP3-210ENST00000525990 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
SSBP3-210ENST00000525990 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
SSBP3-210ENST00000525990 AOX1Q06278 1338 aa15.21■□□□□ 0.03
SSBP3-210ENST00000525990 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
SSBP3-210ENST00000525990 F8W031 263 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-210ENST00000525990 RABL6Q3YEC7 729 aaPredicted RBP15.21■□□□□ 0.03
SSBP3-210ENST00000525990 C15orf52Q6ZUT6 534 aaKnown RBP15.21■□□□□ 0.03
SSBP3-210ENST00000525990 C2orf69Q8N8R5 385 aa15.21■□□□□ 0.03
SSBP3-210ENST00000525990 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
SSBP3-210ENST00000525990 PITPNM2Q9BZ72 1349 aa15.2■□□□□ 0.02
SSBP3-210ENST00000525990 IL1R1P14778 569 aa15.2■□□□□ 0.02
SSBP3-210ENST00000525990 MAP2K2P36507 400 aa15.2■□□□□ 0.02
SSBP3-210ENST00000525990 GYG1P46976 350 aa15.2■□□□□ 0.02
SSBP3-210ENST00000525990 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms