RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 ZFYVE9O95405 1425 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 VAMP4O75379 141 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 NCBP1Q09161 790 aaKnown RBP16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 CWF19L2Q2TBE0 894 aaKnown RBP16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 ISM2Q6H9L7 571 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 VTI1AQ96AJ9 217 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.52■□□□□ 0.231e-6■■■■□ 24.1
NCAPD3-203ENST00000525964 COMMD10Q9Y6G5 202 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 PRAG1Q86YV5 1406 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 HOXC9P31274 260 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 BTG4Q9NY30 223 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 LMTK3Q96Q04 1460 aa16.52■□□□□ 0.23
NCAPD3-203ENST00000525964 AFMP43652 599 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 NMIQ13287 307 aaPredicted RBP16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 ZMYM3Q14202 1370 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 SYCP2Q9BX26 1530 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 GNPATO15228 680 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 STAMBPO95630 424 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 ASIC1P78348 528 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 DCTPP1Q9H773 170 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 NCKAP5LQ9HCH0 1330 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 SH2D4AQ9H788 454 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 SYNCQ9H7C4 482 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
NCAPD3-203ENST00000525964 GOLGA6L10A0A0M3HER8 536 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 CYLC1P35663 651 aaPredicted RBP16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 DENND2AQ9ULE3 1009 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 RAD50Q92878 1312 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 TRAPPC8Q9Y2L5 1435 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 ADCY5O95622 1261 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 MAGEB6Q8N7X4 407 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 LMOD1P29536 600 aaPredicted RBP16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
NCAPD3-203ENST00000525964 DDX12PQ92771 950 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 UBASH3AP57075 661 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 GRM1Q13255 1194 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 PLS1Q14651 629 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 HS2ST1Q7LGA3 356 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 MIGA1Q8NAN2 632 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 STK32BQ9NY57 414 aa16.49■□□□□ 0.23
NCAPD3-203ENST00000525964 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 KIAA0753Q2KHM9 967 aa16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 LRRC45Q96CN5 670 aa16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 C16orf45Q96MC5 204 aaPredicted RBP16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 ABCC1P33527 1531 aa16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 SNW1Q13573 536 aaKnown RBP16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 PABPN1LA6NDY0 278 aaKnown RBP16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 TFCP2Q12800 502 aa16.48■□□□□ 0.23
NCAPD3-203ENST00000525964 DHX32Q7L7V1 743 aaKnown RBP16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 SPTLC2O15270 562 aa16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 CCNL1Q9UK58 526 aaPredicted RBP16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 PRPHP41219 470 aa16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 C16orf71Q8IYS4 520 aaPredicted RBP16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 HOMER2Q9NSB8 354 aa16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 SBNO2Q9Y2G9 1366 aa16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 NUP153P49790 1475 aaKnown RBP16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 HOXB7P09629 217 aa16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 NAP1L4Q99733 375 aaKnown RBP16.47■□□□□ 0.23
NCAPD3-203ENST00000525964 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 KIF4AO95239 1232 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 GNG11P61952 73 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 BBXQ8WY36 941 aaPredicted RBP16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 YTHDC2Q9H6S0 1430 aaKnown RBP16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 HCLS1P14317 486 aaPredicted RBP16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 MARCKSP29966 332 aaPredicted RBP16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 KRT2P35908 639 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 BCCIPQ9P287 314 aaKnown RBP eCLIP16.46■□□□□ 0.23
NCAPD3-203ENST00000525964 CCDC171Q6TFL3 1326 aa16.46■□□□□ 0.22
NCAPD3-203ENST00000525964 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 UGGT2Q9NYU1 1516 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 EYA2O00167 538 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 TSNARE1Q96NA8 513 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 IKBKGQ9Y6K9 419 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 ITSN2Q9NZM3 1697 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 FAM13AO94988 1023 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 F13A1P00488 732 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 RBM28Q9NW13 759 aaKnown RBP16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 CCDC175P0C221 793 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 TEX11Q8IYF3 940 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 FAM200AQ8TCP9 573 aa16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 TTC12Q9H892 705 aaPredicted RBP16.45■□□□□ 0.22
NCAPD3-203ENST00000525964 CREB3L3Q68CJ9 461 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 LMAN1P49257 510 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 BRAPQ7Z569 592 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms