RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
BDNF-213ENST00000525950 NAA30Q147X3 362 aaPredicted RBP9.33□□□□□ -0.92
BDNF-213ENST00000525950 SPEF2Q9C093 1822 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 NRDCO43847 1150 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 YEATS4O95619 227 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 BMS1Q14692 1282 aaKnown RBP9.33□□□□□ -0.92
BDNF-213ENST00000525950 ARID5BQ14865 1188 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 FSIP1Q8NA03 581 aa9.33□□□□□ -0.92
BDNF-213ENST00000525950 MYO1BO43795 1136 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 FBXO38Q6PIJ6 1188 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 DDX11Q96FC9 970 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 KIAA1468Q9P260 1216 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 IKBKBO14920 756 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 E4F1Q66K89 784 aaPredicted RBP9.32□□□□□ -0.92
BDNF-213ENST00000525950 STOX1Q6ZVD7 989 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 KCNG4Q8TDN1 519 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 ZNF592Q92610 1267 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 ATP8B1O43520 1251 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 TPM4P67936 248 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 ILDR1Q86SU0 546 aaPredicted RBP9.32□□□□□ -0.92
BDNF-213ENST00000525950 AOPEPQ8N6M6 819 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 SRRTQ9BXP5 876 aaKnown RBP9.32□□□□□ -0.92
BDNF-213ENST00000525950 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
BDNF-213ENST00000525950 FILIP1Q7Z7B0 1213 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 ARHGEF25Q86VW2 580 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 SIL1Q9H173 461 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 PCDHA7Q9UN72 937 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 PHLPP2Q6ZVD8 1323 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 KCNA4P22459 653 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 NLRP12P59046 1061 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 EPHA10Q5JZY3 1008 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 LINC00301Q8NCQ3 95 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 PPP1R13BQ96KQ4 1090 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 TIGD1Q96MW7 591 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 NEDD4P46934 1319 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 KIF13AQ9H1H9 1805 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 KCNA6P17658 529 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 PDIA3P30101 505 aaKnown RBP9.31□□□□□ -0.92
BDNF-213ENST00000525950 ME1P48163 572 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 TFCP2Q12800 502 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 ZMYM1Q5SVZ6 1142 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
BDNF-213ENST00000525950 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.31□□□□□ -0.92
BDNF-213ENST00000525950 ELF2Q15723 593 aa9.3□□□□□ -0.92
BDNF-213ENST00000525950 EDC3Q96F86 508 aaKnown RBP9.3□□□□□ -0.92
BDNF-213ENST00000525950 TPM1P09493 284 aa9.3□□□□□ -0.92
BDNF-213ENST00000525950 FGD1P98174 961 aa9.3□□□□□ -0.92
BDNF-213ENST00000525950 PRAMEF22A3QJZ6 481 aa9.3□□□□□ -0.92
BDNF-213ENST00000525950 SFPQP23246 707 aaKnown RBP eCLIP9.3□□□□□ -0.92
BDNF-213ENST00000525950 ARMCX5Q6P1M9 558 aa9.3□□□□□ -0.92
BDNF-213ENST00000525950 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
BDNF-213ENST00000525950 TMX1Q9H3N1 280 aa9.3□□□□□ -0.92
BDNF-213ENST00000525950 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.3□□□□□ -0.92
BDNF-213ENST00000525950 SCN11AQ9UI33 1791 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 C5P01031 1676 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 E7EWF7 191 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 APOBRQ0VD83 1088 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 NCAPHQ15003 741 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 SDF4Q9BRK5 362 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 ZNF446Q9NWS9 450 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 WDR19Q8NEZ3 1342 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 MST1RQ04912 1400 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 FAM237AA0A1B0GTK4 181 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 CASP7P55210 303 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 ETF1P62495 437 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 CEBPZQ03701 1054 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 CCDC129Q6ZRS4 1044 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 KLHDC4Q8TBB5 520 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 LRRC59Q96AG4 307 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 XPO4Q9C0E2 1151 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 TRMT1Q9NXH9 659 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 DHX16O60231 1041 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 FDPSP14324 419 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 CMA1P23946 247 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 ANKRD13DQ6ZTN6 518 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 XAGE3Q8WTP9 111 aa9.29□□□□□ -0.92
BDNF-213ENST00000525950 SEC62Q99442 399 aaKnown RBP9.29□□□□□ -0.92
BDNF-213ENST00000525950 FTOQ9C0B1 505 aaKnown RBP eCLIP9.29□□□□□ -0.92
BDNF-213ENST00000525950 CBFA2T2O43439 604 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 ZRANB2O95218 330 aaKnown RBP eCLIP9.28□□□□□ -0.92
BDNF-213ENST00000525950 NDUFA8P51970 172 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 PSME1Q06323 249 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 ZRSR1Q15695 479 aaKnown RBP9.28□□□□□ -0.92
BDNF-213ENST00000525950 MYD88Q99836 296 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 CALCOCO1Q9P1Z2 691 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 TUBE1Q9UJT0 475 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 HSPD1P10809 573 aaKnown RBP9.28□□□□□ -0.92
BDNF-213ENST00000525950 AIMP1Q12904 312 aaKnown RBP9.28□□□□□ -0.92
BDNF-213ENST00000525950 COPS6Q7L5N1 327 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 SLC52A2Q9HAB3 445 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 PAG1Q9NWQ8 432 aa9.28□□□□□ -0.92
BDNF-213ENST00000525950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.28□□□□□ -0.92
BDNF-213ENST00000525950 FHOD1Q9Y613 1164 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms