RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 SCN9AQ15858 1988 aa17.99■□□□□ 0.47
LRRK1-204ENST00000525617 UBE4AQ14139 1066 aa17.99■□□□□ 0.47
LRRK1-204ENST00000525617 RSBN1LQ6PCB5 846 aaPredicted RBP17.99■□□□□ 0.47
LRRK1-204ENST00000525617 C15orf52Q6ZUT6 534 aaKnown RBP17.99■□□□□ 0.47
LRRK1-204ENST00000525617 ZNF804AQ7Z570 1209 aa17.99■□□□□ 0.47
LRRK1-204ENST00000525617 TNNQ9UQP3 1299 aa17.99■□□□□ 0.47
LRRK1-204ENST00000525617 A0A1B0GUL6 1792 aa17.99■□□□□ 0.47
LRRK1-204ENST00000525617 SNAP23O00161 211 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 KLRK1P26718 216 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 METTL24Q5JXM2 366 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
LRRK1-204ENST00000525617 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 AGBL3Q8NEM8 1001 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 FBXW7Q969H0 707 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 ADAMTSL1Q8N6G6 1762 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 PSME4Q14997 1843 aa17.98■□□□□ 0.47
LRRK1-204ENST00000525617 LRRC24Q50LG9 513 aa17.97■□□□□ 0.47
LRRK1-204ENST00000525617 STRIP1Q5VSL9 837 aa17.97■□□□□ 0.47
LRRK1-204ENST00000525617 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
LRRK1-204ENST00000525617 KLHDC4Q8TBB5 520 aa17.97■□□□□ 0.47
LRRK1-204ENST00000525617 GNAI2P04899 355 aa17.96■□□□□ 0.47
LRRK1-204ENST00000525617 TTLL5Q6EMB2 1281 aa17.96■□□□□ 0.47
LRRK1-204ENST00000525617 ZC3H15Q8WU90 426 aaKnown RBP17.96■□□□□ 0.47
LRRK1-204ENST00000525617 CD209Q9NNX6 404 aa17.96■□□□□ 0.47
LRRK1-204ENST00000525617 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
LRRK1-204ENST00000525617 MYO3BQ8WXR4 1341 aa17.96■□□□□ 0.46
LRRK1-204ENST00000525617 EYA2O00167 538 aa17.95■□□□□ 0.46
LRRK1-204ENST00000525617 PDE8BO95263 885 aa17.95■□□□□ 0.46
LRRK1-204ENST00000525617 ITGBL1O95965 494 aaPredicted RBP17.95■□□□□ 0.46
LRRK1-204ENST00000525617 MS4A1P11836 297 aa17.95■□□□□ 0.46
LRRK1-204ENST00000525617 RFX5P48382 616 aaPredicted RBP17.95■□□□□ 0.46
LRRK1-204ENST00000525617 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
LRRK1-204ENST00000525617 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
LRRK1-204ENST00000525617 ZNF609O15014 1411 aa17.95■□□□□ 0.46
LRRK1-204ENST00000525617 IRS2Q9Y4H2 1338 aa17.95■□□□□ 0.46
LRRK1-204ENST00000525617 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 USP17L8P0C7I0 530 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 GTF2IP78347 998 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 TBC1D10BQ4KMP7 808 aaPredicted RBP17.94■□□□□ 0.46
LRRK1-204ENST00000525617 DACT2Q5SW24 774 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 RBM26Q5T8P6 1007 aaKnown RBP17.94■□□□□ 0.46
LRRK1-204ENST00000525617 SAMD7Q7Z3H4 446 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 ITPRIPQ8IWB1 547 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 OGFOD1Q8N543 542 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 TRPM4Q8TD43 1214 aa17.94■□□□□ 0.46
LRRK1-204ENST00000525617 SRGAP3O43295 1099 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 CIAO1O76071 339 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 IL1R1P14778 569 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 HIRAP54198 1017 aaPredicted RBP17.93■□□□□ 0.46
LRRK1-204ENST00000525617 KIF4BQ2VIQ3 1234 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 CAVIN4Q5BKX8 364 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 VPS37DQ86XT2 251 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 SIL1Q9H173 461 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 PASKQ96RG2 1323 aa17.93■□□□□ 0.46
LRRK1-204ENST00000525617 IFIT1P09914 478 aaKnown RBP17.92■□□□□ 0.46
LRRK1-204ENST00000525617 HIBADHP31937 336 aaKnown RBP17.92■□□□□ 0.46
LRRK1-204ENST00000525617 ZNF280AP59817 542 aaPredicted RBP17.92■□□□□ 0.46
LRRK1-204ENST00000525617 HTRA3P83110 453 aa17.92■□□□□ 0.46
LRRK1-204ENST00000525617 MTX1Q13505 466 aa17.92■□□□□ 0.46
LRRK1-204ENST00000525617 PUM3Q15397 648 aaKnown RBP17.92■□□□□ 0.46
LRRK1-204ENST00000525617 VGLL2Q8N8G2 317 aa17.92■□□□□ 0.46
LRRK1-204ENST00000525617 GMLQ99445 158 aa17.92■□□□□ 0.46
LRRK1-204ENST00000525617 CREBZFQ9NS37 354 aa17.92■□□□□ 0.46
LRRK1-204ENST00000525617 PGAP2Q9UHJ9 254 aa17.92■□□□□ 0.46
LRRK1-204ENST00000525617 GYG1P46976 350 aa17.91■□□□□ 0.46
LRRK1-204ENST00000525617 MMP14P50281 582 aa17.91■□□□□ 0.46
LRRK1-204ENST00000525617 FAM84BQ96KN1 310 aaPredicted RBP17.91■□□□□ 0.46
LRRK1-204ENST00000525617 COPRSQ9NQ92 184 aa17.91■□□□□ 0.46
LRRK1-204ENST00000525617 CEP126Q9P2H0 1117 aa17.91■□□□□ 0.46
LRRK1-204ENST00000525617 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
LRRK1-204ENST00000525617 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 SASH1O94885 1247 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 RLBP1P12271 317 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 SLC5A1P13866 664 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
LRRK1-204ENST00000525617 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 ATG9AQ7Z3C6 839 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 DCPSQ96C86 337 aaKnown RBP17.9■□□□□ 0.46
LRRK1-204ENST00000525617 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 MYOZ2Q9NPC6 264 aa17.9■□□□□ 0.46
LRRK1-204ENST00000525617 PA2G4Q9UQ80 394 aaKnown RBP17.9■□□□□ 0.46
LRRK1-204ENST00000525617 FRAT2O75474 233 aaPredicted RBP17.89■□□□□ 0.45
LRRK1-204ENST00000525617 TDRD7Q8NHU6 1098 aaKnown RBP17.89■□□□□ 0.45
LRRK1-204ENST00000525617 LPIN2Q92539 896 aa17.89■□□□□ 0.45
LRRK1-204ENST00000525617 ZBTB7BO15156 539 aaPredicted RBP17.88■□□□□ 0.45
LRRK1-204ENST00000525617 EGFRP00533 1210 aa17.88■□□□□ 0.45
LRRK1-204ENST00000525617 FKBP1AP62942 108 aaKnown RBP17.88■□□□□ 0.45
LRRK1-204ENST00000525617 FBXO33Q7Z6M2 555 aa17.88■□□□□ 0.45
LRRK1-204ENST00000525617 KIAA0825Q8IV33 1275 aa17.88■□□□□ 0.45
LRRK1-204ENST00000525617 DNAJC5GQ8N7S2 189 aa17.88■□□□□ 0.45
LRRK1-204ENST00000525617 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.88■□□□□ 0.45
LRRK1-204ENST00000525617 PANK1Q8TE04 598 aa17.88■□□□□ 0.45
LRRK1-204ENST00000525617 ZNF646O15015 1829 aaPredicted RBP17.87■□□□□ 0.45
LRRK1-204ENST00000525617 FGFR2P21802 821 aa17.87■□□□□ 0.45
LRRK1-204ENST00000525617 ATP2B3Q16720 1220 aa17.87■□□□□ 0.45
LRRK1-204ENST00000525617 KLRG1Q96E93 195 aa17.87■□□□□ 0.45
LRRK1-204ENST00000525617 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
LRRK1-204ENST00000525617 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
LRRK1-204ENST00000525617 TRAF5O00463 557 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms