RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 G3V3G9 751 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 GRM8O00222 908 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 ALDH1L1O75891 902 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 CHRNDQ07001 517 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 DCAF8Q5TAQ9 597 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 AGBL3Q8NEM8 1001 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 HELBQ8NG08 1087 aaPredicted RBP15.91■□□□□ 0.14
SMCO4-202ENST00000525141 ZNF594Q96JF6 807 aaPredicted RBP15.91■□□□□ 0.14
SMCO4-202ENST00000525141 WBP1LQ9NX94 342 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 ABT1Q9ULW3 272 aaKnown RBP15.91■□□□□ 0.14
SMCO4-202ENST00000525141 TLL2Q9Y6L7 1015 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 SPEF2Q9C093 1822 aa15.91■□□□□ 0.14
SMCO4-202ENST00000525141 ANKRD18BA2A2Z9 1011 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 USP17L3A6NCW0 530 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 USP17L4A6NCW7 530 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 FOXN1O15353 648 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 TAF5LO75529 589 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 CELF2O95319 508 aaKnown RBP15.9■□□□□ 0.14
SMCO4-202ENST00000525141 NBPF7P0C2Y1 421 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-202ENST00000525141 DACT2Q5SW24 774 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 CYP4F22Q6NT55 531 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 USP17L1Q7RTZ2 530 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 SRCIN1Q9C0H9 1055 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 ZNF804BA4D1E1 1349 aa15.9■□□□□ 0.14
SMCO4-202ENST00000525141 MED23Q9ULK4 1368 aa15.89■□□□□ 0.13
SMCO4-202ENST00000525141 SAPCD2Q86UD0 394 aa15.89■□□□□ 0.13
SMCO4-202ENST00000525141 SUCLG2Q96I99 432 aa15.89■□□□□ 0.13
SMCO4-202ENST00000525141 MPHOSPH8Q99549 860 aa15.89■□□□□ 0.13
SMCO4-202ENST00000525141 ANKRD2Q9GZV1 360 aa15.89■□□□□ 0.13
SMCO4-202ENST00000525141 COA1Q9GZY4 146 aa15.89■□□□□ 0.13
SMCO4-202ENST00000525141 UTYO14607 1347 aa15.89■□□□□ 0.13
SMCO4-202ENST00000525141 IFIT5Q13325 482 aaKnown RBP15.88■□□□□ 0.13
SMCO4-202ENST00000525141 SCARF1Q14162 830 aa15.88■□□□□ 0.13
SMCO4-202ENST00000525141 C9orf78Q9NZ63 289 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-202ENST00000525141 PSME4Q14997 1843 aa15.87■□□□□ 0.13
SMCO4-202ENST00000525141 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
SMCO4-202ENST00000525141 USP17L8P0C7I0 530 aa15.87■□□□□ 0.13
SMCO4-202ENST00000525141 KIF4BQ2VIQ3 1234 aa15.87■□□□□ 0.13
SMCO4-202ENST00000525141 C15orf52Q6ZUT6 534 aaKnown RBP15.87■□□□□ 0.13
SMCO4-202ENST00000525141 CAPNS2Q96L46 248 aa15.87■□□□□ 0.13
SMCO4-202ENST00000525141 PUS3Q9BZE2 481 aaKnown RBP15.87■□□□□ 0.13
SMCO4-202ENST00000525141 ZBED9Q6R2W3 1325 aa15.87■□□□□ 0.13
SMCO4-202ENST00000525141 ZNF609O15014 1411 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 AOC2O75106 756 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
SMCO4-202ENST00000525141 DSG3P32926 999 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 STRIP1Q5VSL9 837 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 KRT26Q7Z3Y9 468 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 USP44Q9H0E7 712 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 CD209Q9NNX6 404 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 MYOZ2Q9NPC6 264 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 CHMP3Q9Y3E7 222 aa15.86■□□□□ 0.13
SMCO4-202ENST00000525141 ZNF646O15015 1829 aaPredicted RBP15.86■□□□□ 0.13
SMCO4-202ENST00000525141 TTLL5Q6EMB2 1281 aa15.85■□□□□ 0.13
SMCO4-202ENST00000525141 ANKRD44Q8N8A2 993 aa15.85■□□□□ 0.13
SMCO4-202ENST00000525141 DCPSQ96C86 337 aaKnown RBP15.85■□□□□ 0.13
SMCO4-202ENST00000525141 ZIC5Q96T25 663 aa15.85■□□□□ 0.13
SMCO4-202ENST00000525141 SCAF8Q9UPN6 1271 aaKnown RBP15.85■□□□□ 0.13
SMCO4-202ENST00000525141 GTF2IP78347 998 aa15.84■□□□□ 0.13
SMCO4-202ENST00000525141 CCDC57Q2TAC2 916 aa15.84■□□□□ 0.13
SMCO4-202ENST00000525141 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
SMCO4-202ENST00000525141 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
SMCO4-202ENST00000525141 RABL6Q3YEC7 729 aaPredicted RBP15.84■□□□□ 0.13
SMCO4-202ENST00000525141 ANGEL2Q5VTE6 544 aaKnown RBP15.84■□□□□ 0.13
SMCO4-202ENST00000525141 LDHAL6AQ6ZMR3 332 aa15.84■□□□□ 0.13
SMCO4-202ENST00000525141 HHIPL1Q96JK4 782 aa15.84■□□□□ 0.13
SMCO4-202ENST00000525141 RIPOR2Q9Y4F9 1068 aa15.84■□□□□ 0.13
SMCO4-202ENST00000525141 PLIN1O60240 522 aa15.83■□□□□ 0.12
SMCO4-202ENST00000525141 CERS5Q8N5B7 392 aa15.83■□□□□ 0.12
SMCO4-202ENST00000525141 BICC1Q9H694 974 aaKnown RBP15.83■□□□□ 0.12
SMCO4-202ENST00000525141 GGA3Q9NZ52 723 aa15.83■□□□□ 0.12
SMCO4-202ENST00000525141 PTPRCP08575 1304 aa15.83■□□□□ 0.12
SMCO4-202ENST00000525141 IL1R1P14778 569 aa15.82■□□□□ 0.12
SMCO4-202ENST00000525141 ECE1P42892 770 aa15.82■□□□□ 0.12
SMCO4-202ENST00000525141 GRM1Q13255 1194 aa15.82■□□□□ 0.12
SMCO4-202ENST00000525141 ZBED3Q96IU2 234 aaPredicted RBP15.82■□□□□ 0.12
SMCO4-202ENST00000525141 FAM155AB1AL88 458 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-202ENST00000525141 WNT10BO00744 389 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 HSPA8P11142 646 aaKnown RBP15.81■□□□□ 0.12
SMCO4-202ENST00000525141 MAP2K2P36507 400 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 KCNJ4P48050 445 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 LBX1P52954 281 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 MAP2K1Q02750 393 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-202ENST00000525141 LRRC24Q50LG9 513 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 PRAMEF18Q5VWM3 479 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-202ENST00000525141 FBXW7Q969H0 707 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 CDCA5Q96FF9 252 aa15.81■□□□□ 0.12
SMCO4-202ENST00000525141 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
SMCO4-202ENST00000525141 CTCFP49711 727 aaPredicted RBP15.8■□□□□ 0.12
SMCO4-202ENST00000525141 BRPF1P55201 1214 aaPredicted RBP15.8■□□□□ 0.12
SMCO4-202ENST00000525141 HUNKP57058 714 aa15.8■□□□□ 0.12
SMCO4-202ENST00000525141 SULF1Q8IWU6 871 aa15.8■□□□□ 0.12
SMCO4-202ENST00000525141 KLHDC4Q8TBB5 520 aa15.8■□□□□ 0.12
SMCO4-202ENST00000525141 FAM84BQ96KN1 310 aaPredicted RBP15.8■□□□□ 0.12
SMCO4-202ENST00000525141 GBA2Q9HCG7 927 aaPredicted RBP15.8■□□□□ 0.12
SMCO4-202ENST00000525141 PRDM10Q9NQV6 1147 aa15.8■□□□□ 0.12
SMCO4-202ENST00000525141 CNNM1Q9NRU3 951 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms