RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 PGBD1Q96JS3 809 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 ZNF830Q96NB3 372 aaPredicted RBP10.51□□□□□ -0.73
PKP3-202ENST00000524646 CBX8Q9HC52 389 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 DOT1LQ8TEK3 1739 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 ERVV-2B6SEH9 535 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 CHGBP05060 677 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 CDC25BP30305 580 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
PKP3-202ENST00000524646 FGD1P98174 961 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 ATL3Q6DD88 541 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 TTLL7Q6ZT98 887 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 MPNDQ8N594 471 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 CCDC191Q8NCU4 936 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 KIAA1524Q8TCG1 905 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 DDX17Q92841 729 aaKnown RBP10.5□□□□□ -0.73
PKP3-202ENST00000524646 ATG3Q9NT62 314 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 TFIP11Q9UBB9 837 aaKnown RBP10.5□□□□□ -0.73
PKP3-202ENST00000524646 CFAP45Q9UL16 551 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 PYCARDQ9ULZ3 195 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 CICQ96RK0 1608 aaPredicted RBP10.5□□□□□ -0.73
PKP3-202ENST00000524646 MYH6P13533 1939 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 RREB1Q92766 1687 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 CARMIL3Q8ND23 1372 aa10.5□□□□□ -0.73
PKP3-202ENST00000524646 CTAGE5O15320 804 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 RNF113AO15541 343 aaKnown RBP10.49□□□□□ -0.73
PKP3-202ENST00000524646 IFIT1P09914 478 aaKnown RBP10.49□□□□□ -0.73
PKP3-202ENST00000524646 ZNF75DP51815 510 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 EXOSC10Q01780 885 aaKnown RBP10.49□□□□□ -0.73
PKP3-202ENST00000524646 CAMK4Q16566 473 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 STX1AQ16623 288 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 LRRFIP1Q32MZ4 808 aaKnown RBP10.49□□□□□ -0.73
PKP3-202ENST00000524646 LUZP1Q86V48 1076 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 PLA2G4DQ86XP0 818 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 CKAP2LQ8IYA6 745 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 C17orf53Q8N3J3 647 aaPredicted RBP10.49□□□□□ -0.73
PKP3-202ENST00000524646 DDX11Q96FC9 970 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 ZNF396Q96N95 335 aaPredicted RBP10.49□□□□□ -0.73
PKP3-202ENST00000524646 LRRC2Q9BYS8 371 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 BCORQ6W2J9 1755 aa10.49□□□□□ -0.73
PKP3-202ENST00000524646 COL14A1Q05707 1796 aaKnown RBP10.48□□□□□ -0.73
PKP3-202ENST00000524646 STRCQ7RTU9 1775 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 A0A1B0GUL7 405 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 E7EWF7 191 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 M0R2C6 588 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 NR1I2O75469 434 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 CTDNEP1O95476 244 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 HSPD1P10809 573 aaKnown RBP10.48□□□□□ -0.73
PKP3-202ENST00000524646 PTGS1P23219 599 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 RBM10P98175 930 aaKnown RBP10.48□□□□□ -0.73
PKP3-202ENST00000524646 APOBRQ0VD83 1088 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 NKX1-1Q15270 411 aaPredicted RBP10.48□□□□□ -0.73
PKP3-202ENST00000524646 CCDC73Q6ZRK6 1079 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 FBXL16Q8N461 479 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 SPC24Q8NBT2 197 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 ZCRB1Q8TBF4 217 aaKnown RBP10.48□□□□□ -0.73
PKP3-202ENST00000524646 NEUROD6Q96NK8 337 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 ISCA1Q9BUE6 129 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 FAM13BQ9NYF5 915 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 MYH2Q9UKX2 1941 aa10.48□□□□□ -0.73
PKP3-202ENST00000524646 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
PKP3-202ENST00000524646 ADD1P35611 737 aaKnown RBP10.47□□□□□ -0.73
PKP3-202ENST00000524646 CHAF1AQ13111 956 aaPredicted RBP10.47□□□□□ -0.73
PKP3-202ENST00000524646 LRRC24Q50LG9 513 aa10.47□□□□□ -0.73
PKP3-202ENST00000524646 SARM1Q6SZW1 724 aa10.47□□□□□ -0.73
PKP3-202ENST00000524646 ZNF274Q96GC6 653 aaPredicted RBP10.47□□□□□ -0.73
PKP3-202ENST00000524646 DNAJC25Q9H1X3 360 aa10.47□□□□□ -0.73
PKP3-202ENST00000524646 ZBTB3Q9H5J0 574 aa10.47□□□□□ -0.73
PKP3-202ENST00000524646 RCOR1Q9UKL0 485 aa10.47□□□□□ -0.73
PKP3-202ENST00000524646 CCDC9Q9Y3X0 531 aaKnown RBP10.47□□□□□ -0.73
PKP3-202ENST00000524646 WDR19Q8NEZ3 1342 aa10.47□□□□□ -0.73
PKP3-202ENST00000524646 ZNF165P49910 485 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 FOSBP53539 338 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 EVCP57679 992 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 FAM160A1Q05DH4 1040 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 TTC39AQ5SRH9 613 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 PLA2G12BQ9BX93 195 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 PRDM11Q9NQV5 511 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 CTNNA3Q9UI47 895 aa10.46□□□□□ -0.73
PKP3-202ENST00000524646 DLEC1Q9Y238 1755 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 CDHR2Q9BYE9 1310 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 KINO60870 393 aaKnown RBP10.45□□□□□ -0.74
PKP3-202ENST00000524646 A1BGP04217 495 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 IL2RBP14784 551 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
PKP3-202ENST00000524646 SLFNL1Q499Z3 407 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 TOM1L2Q6ZVM7 507 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 CCAR1Q8IX12 1150 aaKnown RBP10.45□□□□□ -0.74
PKP3-202ENST00000524646 APPBP2Q92624 585 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 ZNF594Q96JF6 807 aaPredicted RBP10.45□□□□□ -0.74
PKP3-202ENST00000524646 USP28Q96RU2 1077 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 CARD10Q9BWT7 1032 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 TRIM5Q9C035 493 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 GOLPH3LQ9H4A5 285 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 CEP126Q9P2H0 1117 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 AKAP2Q9Y2D5 859 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 MYH13Q9UKX3 1938 aa10.45□□□□□ -0.74
PKP3-202ENST00000524646 ROBO1Q9Y6N7 1651 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms