RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 SBF1O95248 1867 aa9.63□□□□□ -0.87
NPAS4-202ENST00000524617 UTRNP46939 3433 aa9.63□□□□□ -0.87
NPAS4-202ENST00000524617 DICER1Q9UPY3 1922 aaKnown RBP9.62□□□□□ -0.87
NPAS4-202ENST00000524617 C6orf229H3BNL8 230 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 FZD9O00144 591 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 SNAP23O00161 211 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 PPIP5K2O43314 1243 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 KLRK1P26718 216 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 ATP2B3Q16720 1220 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 AOC3Q16853 763 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 WASHC4Q2M389 1173 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 TXNRD3Q86VQ6 643 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 RHPN1Q8TCX5 695 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 GCC1Q96CN9 775 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 AKAP2Q9Y2D5 859 aa9.62□□□□□ -0.87
NPAS4-202ENST00000524617 ZNF646O15015 1829 aaPredicted RBP9.61□□□□□ -0.87
NPAS4-202ENST00000524617 A0A1B0GUL7 405 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 NEFLP07196 543 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 IFIT1P09914 478 aaKnown RBP9.61□□□□□ -0.87
NPAS4-202ENST00000524617 SLC5A1P13866 664 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 IL1R1P14778 569 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 KCNJ4P48050 445 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 TNNI3KQ59H18 835 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 C9orf131Q5VYM1 1079 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 FBXO33Q7Z6M2 555 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 GPR101Q96P66 508 aaPredicted RBP9.61□□□□□ -0.87
NPAS4-202ENST00000524617 ZC3H12CQ9C0D7 883 aaKnown RBP9.61□□□□□ -0.87
NPAS4-202ENST00000524617 COA1Q9GZY4 146 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 RWDD1Q9H446 243 aaPredicted RBP9.61□□□□□ -0.87
NPAS4-202ENST00000524617 RNF181Q9P0P0 153 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 FPGT-TNNI3KV9GXZ4 949 aa9.61□□□□□ -0.87
NPAS4-202ENST00000524617 YDJCA8MPS7 323 aa9.6□□□□□ -0.87
NPAS4-202ENST00000524617 ECE2O60344 883 aa9.6□□□□□ -0.87
NPAS4-202ENST00000524617 IGHDP01880 384 aa9.6□□□□□ -0.87
NPAS4-202ENST00000524617 OS9Q13438 667 aaPredicted RBP9.6□□□□□ -0.87
NPAS4-202ENST00000524617 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
NPAS4-202ENST00000524617 NIM1KQ8IY84 436 aa9.6□□□□□ -0.87
NPAS4-202ENST00000524617 LARGE2Q8N3Y3 721 aa9.6□□□□□ -0.87
NPAS4-202ENST00000524617 EAF2Q96CJ1 260 aaPredicted RBP9.6□□□□□ -0.87
NPAS4-202ENST00000524617 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
NPAS4-202ENST00000524617 LRRCC1Q9C099 1032 aa9.6□□□□□ -0.87
NPAS4-202ENST00000524617 COL1A1P02452 1464 aaPredicted RBP9.59□□□□□ -0.87
NPAS4-202ENST00000524617 PDS5AQ29RF7 1337 aaKnown RBP9.59□□□□□ -0.87
NPAS4-202ENST00000524617 KDM2BQ8NHM5 1336 aa9.59□□□□□ -0.87
NPAS4-202ENST00000524617 PSME4Q14997 1843 aa9.59□□□□□ -0.87
NPAS4-202ENST00000524617 ZNF804AQ7Z570 1209 aa9.59□□□□□ -0.87
NPAS4-202ENST00000524617 TDRD7Q8NHU6 1098 aaKnown RBP9.59□□□□□ -0.87
NPAS4-202ENST00000524617 JDP2Q8WYK2 163 aa9.59□□□□□ -0.87
NPAS4-202ENST00000524617 XAGE2Q96GT9 111 aa9.59□□□□□ -0.87
NPAS4-202ENST00000524617 ZNF512BQ96KM6 892 aaPredicted RBP9.59□□□□□ -0.87
NPAS4-202ENST00000524617 CD209Q9NNX6 404 aa9.59□□□□□ -0.87
NPAS4-202ENST00000524617 DBNLQ9UJU6 430 aaKnown RBP9.59□□□□□ -0.87
NPAS4-202ENST00000524617 ZNRF3Q9ULT6 936 aa9.59□□□□□ -0.87
NPAS4-202ENST00000524617 SALL3Q9BXA9 1300 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 ARID4AP29374 1257 aaPredicted RBP9.58□□□□□ -0.88
NPAS4-202ENST00000524617 ADORA1P30542 326 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 HIBADHP31937 336 aaKnown RBP9.58□□□□□ -0.88
NPAS4-202ENST00000524617 GYG1P46976 350 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 TIMM10P62072 90 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 FKBP1AP62942 108 aaKnown RBP9.58□□□□□ -0.88
NPAS4-202ENST00000524617 CAVIN4Q5BKX8 364 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 CLASRPQ8N2M8 674 aaKnown RBP9.58□□□□□ -0.88
NPAS4-202ENST00000524617 UBE2Q2Q8WVN8 375 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 DBNDD2Q9BQY9 259 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 DBNDD1Q9H9R9 158 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 CHD4Q14839 1912 aa9.58□□□□□ -0.88
NPAS4-202ENST00000524617 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 ZNF541Q9H0D2 1346 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 SCN9AQ15858 1988 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 WDR90Q96KV7 1748 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 SEMA3EO15041 775 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 PHKA1P46020 1223 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 BCAMP50895 628 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 DOK7Q18PE1 504 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 STRIP1Q5VSL9 837 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 AACSQ86V21 672 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 L3MBTL3Q96JM7 780 aaPredicted RBP9.57□□□□□ -0.88
NPAS4-202ENST00000524617 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
NPAS4-202ENST00000524617 TLR7Q9NYK1 1049 aaKnown RBP9.57□□□□□ -0.88
NPAS4-202ENST00000524617 SALL1Q9NSC2 1324 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 CCDC88AQ3V6T2 1871 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 GLTPD2A6NH11 291 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 VIL1P09327 827 aaKnown RBP9.56□□□□□ -0.88
NPAS4-202ENST00000524617 EIF6P56537 245 aaKnown RBP9.56□□□□□ -0.88
NPAS4-202ENST00000524617 NUCB1Q02818 461 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 CXCL9Q07325 125 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 DACT2Q5SW24 774 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 GPC2Q8N158 579 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.56□□□□□ -0.88
NPAS4-202ENST00000524617 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
NPAS4-202ENST00000524617 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
NPAS4-202ENST00000524617 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
NPAS4-202ENST00000524617 APBB1O00213 710 aa9.55□□□□□ -0.88
NPAS4-202ENST00000524617 PSMD14O00487 310 aa9.55□□□□□ -0.88
NPAS4-202ENST00000524617 SMARCA5O60264 1052 aaPredicted RBP9.55□□□□□ -0.88
NPAS4-202ENST00000524617 UQCRFS1P1P0C7P4 283 aa9.55□□□□□ -0.88
NPAS4-202ENST00000524617 RPS12P25398 132 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms