RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 MED23Q9ULK4 1368 aa20.7■□□□□ 0.9
CSGALNACT1-216ENST00000524213 KCNJ4P48050 445 aa20.69■□□□□ 0.9
CSGALNACT1-216ENST00000524213 RFX5P48382 616 aaPredicted RBP20.69■□□□□ 0.9
CSGALNACT1-216ENST00000524213 MTX1Q13505 466 aa20.69■□□□□ 0.9
CSGALNACT1-216ENST00000524213 MVPQ14764 893 aaKnown RBP20.69■□□□□ 0.9
CSGALNACT1-216ENST00000524213 ZBTB12Q9Y330 459 aaPredicted RBP20.69■□□□□ 0.9
CSGALNACT1-216ENST00000524213 MROH5Q6ZUA9 1318 aa20.69■□□□□ 0.9
CSGALNACT1-216ENST00000524213 ZNF804BA4D1E1 1349 aa20.68■□□□□ 0.9
CSGALNACT1-216ENST00000524213 PTPN12Q05209 780 aaKnown RBP20.67■□□□□ 0.9
CSGALNACT1-216ENST00000524213 HELBQ8NG08 1087 aaPredicted RBP20.67■□□□□ 0.9
CSGALNACT1-216ENST00000524213 ADARB2Q9NS39 739 aaKnown RBP20.67■□□□□ 0.9
CSGALNACT1-216ENST00000524213 RIPOR2Q9Y4F9 1068 aa20.67■□□□□ 0.9
CSGALNACT1-216ENST00000524213 SHTN1A0MZ66 631 aa20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 EYA2O00167 538 aa20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 KLRK1P26718 216 aa20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 USP50Q70EL3 339 aaPredicted RBP20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 TXNRD3Q86VQ6 643 aa20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 PUS3Q9BZE2 481 aaKnown RBP20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 COG6Q9Y2V7 657 aa20.66■□□□□ 0.9
CSGALNACT1-216ENST00000524213 SNAP23O00161 211 aa20.65■□□□□ 0.9
CSGALNACT1-216ENST00000524213 TAF5LO75529 589 aa20.65■□□□□ 0.9
CSGALNACT1-216ENST00000524213 METTL24Q5JXM2 366 aa20.65■□□□□ 0.9
CSGALNACT1-216ENST00000524213 MAP1SQ66K74 1059 aaPredicted RBP20.65■□□□□ 0.9
CSGALNACT1-216ENST00000524213 KLHDC4Q8TBB5 520 aa20.65■□□□□ 0.9
CSGALNACT1-216ENST00000524213 COPRSQ9NQ92 184 aa20.65■□□□□ 0.9
CSGALNACT1-216ENST00000524213 CNOT7Q9UIV1 285 aaKnown RBP20.65■□□□□ 0.9
CSGALNACT1-216ENST00000524213 CIAO1O76071 339 aa20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 ITGBL1O95965 494 aaPredicted RBP20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 VIL1P09327 827 aaKnown RBP20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 UBE4AQ14139 1066 aa20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 LRRC24Q50LG9 513 aa20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 C15orf52Q6ZUT6 534 aaKnown RBP20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 MICALL2Q8IY33 904 aa20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 DPF2Q92785 391 aa20.64■□□□□ 0.89
CSGALNACT1-216ENST00000524213 TRPM7Q96QT4 1865 aa20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 PASKQ96RG2 1323 aa20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 RPS12P25398 132 aaKnown RBP20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 ATP8B2P98198 1209 aa20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 PODNQ7Z5L7 613 aa20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 CNTROBQ8N137 903 aa20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 DNAJC5GQ8N7S2 189 aa20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 COA1Q9GZY4 146 aa20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 POLR2AP24928 1970 aaKnown RBP20.63■□□□□ 0.89
CSGALNACT1-216ENST00000524213 H7C1D1 291 aa20.62■□□□□ 0.89
CSGALNACT1-216ENST00000524213 TRPM4Q8TD43 1214 aa20.62■□□□□ 0.89
CSGALNACT1-216ENST00000524213 IRS2Q9Y4H2 1338 aa20.61■□□□□ 0.89
CSGALNACT1-216ENST00000524213 PDE8BO95263 885 aa20.61■□□□□ 0.89
CSGALNACT1-216ENST00000524213 IL15P40933 162 aaPredicted RBP20.61■□□□□ 0.89
CSGALNACT1-216ENST00000524213 HIRAP54198 1017 aaPredicted RBP20.61■□□□□ 0.89
CSGALNACT1-216ENST00000524213 RSBN1LQ6PCB5 846 aaPredicted RBP20.61■□□□□ 0.89
CSGALNACT1-216ENST00000524213 ZNF609O15014 1411 aa20.61■□□□□ 0.89
CSGALNACT1-216ENST00000524213 USP17L3A6NCW0 530 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 USP17L4A6NCW7 530 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 C20orf194Q5TEA3 1177 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 USP17L1Q7RTZ2 530 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 SAMD7Q7Z3H4 446 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 SIL1Q9H173 461 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 C1orf115Q9H7X2 142 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 CEP126Q9P2H0 1117 aa20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 PA2G4Q9UQ80 394 aaKnown RBP20.6■□□□□ 0.89
CSGALNACT1-216ENST00000524213 PNMA6EA0A0J9YXQ4 647 aa20.59■□□□□ 0.89
CSGALNACT1-216ENST00000524213 EGFRP00533 1210 aa20.59■□□□□ 0.89
CSGALNACT1-216ENST00000524213 POLA2Q14181 598 aa20.59■□□□□ 0.89
CSGALNACT1-216ENST00000524213 ATG9AQ7Z3C6 839 aa20.59■□□□□ 0.89
CSGALNACT1-216ENST00000524213 ZNF804AQ7Z570 1209 aa20.59■□□□□ 0.89
CSGALNACT1-216ENST00000524213 SSH3Q8TE77 659 aa20.59■□□□□ 0.89
CSGALNACT1-216ENST00000524213 ZBTB40Q9NUA8 1239 aa20.59■□□□□ 0.89
CSGALNACT1-216ENST00000524213 IFIT1P09914 478 aaKnown RBP20.58■□□□□ 0.89
CSGALNACT1-216ENST00000524213 TBC1D10BQ4KMP7 808 aaPredicted RBP20.58■□□□□ 0.89
CSGALNACT1-216ENST00000524213 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.89
CSGALNACT1-216ENST00000524213 VGLL2Q8N8G2 317 aa20.58■□□□□ 0.89
CSGALNACT1-216ENST00000524213 AGBL3Q8NEM8 1001 aa20.58■□□□□ 0.89
CSGALNACT1-216ENST00000524213 GMLQ99445 158 aa20.58■□□□□ 0.89
CSGALNACT1-216ENST00000524213 FMR1Q06787 632 aaKnown RBP eCLIP20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 G3BP1Q13283 466 aaKnown RBP eCLIP20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 PUM3Q15397 648 aaKnown RBP20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 DACT2Q5SW24 774 aa20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 RBM26Q5T8P6 1007 aaKnown RBP20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 CEP85Q6P2H3 762 aa20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 FBXW7Q969H0 707 aa20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 MXD3Q9BW11 206 aa20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 CD209Q9NNX6 404 aa20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 CREBZFQ9NS37 354 aa20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 PGAP2Q9UHJ9 254 aa20.57■□□□□ 0.88
CSGALNACT1-216ENST00000524213 SLC5A1P13866 664 aa20.56■□□□□ 0.88
CSGALNACT1-216ENST00000524213 CAVIN4Q5BKX8 364 aa20.56■□□□□ 0.88
CSGALNACT1-216ENST00000524213 LPIN2Q92539 896 aa20.56■□□□□ 0.88
CSGALNACT1-216ENST00000524213 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
CSGALNACT1-216ENST00000524213 TRAF5O00463 557 aa20.55■□□□□ 0.88
CSGALNACT1-216ENST00000524213 HMMRO75330 724 aa20.55■□□□□ 0.88
CSGALNACT1-216ENST00000524213 ZNF280AP59817 542 aaPredicted RBP20.55■□□□□ 0.88
CSGALNACT1-216ENST00000524213 STRIP1Q5VSL9 837 aa20.55■□□□□ 0.88
CSGALNACT1-216ENST00000524213 ZC3H15Q8WU90 426 aaKnown RBP20.55■□□□□ 0.88
CSGALNACT1-216ENST00000524213 AKAP2Q9Y2D5 859 aa20.55■□□□□ 0.88
CSGALNACT1-216ENST00000524213 TMEM88BA6NKF7 163 aa20.54■□□□□ 0.88
CSGALNACT1-216ENST00000524213 FGFR2P21802 821 aa20.54■□□□□ 0.88
CSGALNACT1-216ENST00000524213 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
CSGALNACT1-216ENST00000524213 GTF2IP78347 998 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms