RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 USP17L4A6NCW7 530 aa26.16■■□□□ 1.78
TRAPPC9-215ENST00000524162 ITGBL1O95965 494 aaPredicted RBP26.16■■□□□ 1.78
TRAPPC9-215ENST00000524162 USP17L1Q7RTZ2 530 aa26.16■■□□□ 1.78
TRAPPC9-215ENST00000524162 FRAT1Q92837 279 aaPredicted RBP26.16■■□□□ 1.78
TRAPPC9-215ENST00000524162 KCNQ5Q9NR82 932 aa26.16■■□□□ 1.78
TRAPPC9-215ENST00000524162 STRIP1Q5VSL9 837 aa26.15■■□□□ 1.78
TRAPPC9-215ENST00000524162 RSBN1LQ6PCB5 846 aaPredicted RBP26.15■■□□□ 1.78
TRAPPC9-215ENST00000524162 TXNRD3Q86VQ6 643 aa26.15■■□□□ 1.78
TRAPPC9-215ENST00000524162 GMLQ99445 158 aa26.15■■□□□ 1.78
TRAPPC9-215ENST00000524162 MYO3BQ8WXR4 1341 aa26.14■■□□□ 1.78
TRAPPC9-215ENST00000524162 RFX5P48382 616 aaPredicted RBP26.14■■□□□ 1.78
TRAPPC9-215ENST00000524162 CLEC11AQ9Y240 323 aa26.14■■□□□ 1.78
TRAPPC9-215ENST00000524162 TAF5LO75529 589 aa26.13■■□□□ 1.77
TRAPPC9-215ENST00000524162 MTX1Q13505 466 aa26.13■■□□□ 1.77
TRAPPC9-215ENST00000524162 MICALL2Q8IY33 904 aa26.13■■□□□ 1.77
TRAPPC9-215ENST00000524162 CNTROBQ8N137 903 aa26.13■■□□□ 1.77
TRAPPC9-215ENST00000524162 MEIS3Q99687 375 aa26.13■■□□□ 1.77
TRAPPC9-215ENST00000524162 ZBTB12Q9Y330 459 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC9-215ENST00000524162 ZNF280AP59817 542 aaPredicted RBP26.12■■□□□ 1.77
TRAPPC9-215ENST00000524162 HELBQ8NG08 1087 aaPredicted RBP26.12■■□□□ 1.77
TRAPPC9-215ENST00000524162 PUS3Q9BZE2 481 aaKnown RBP26.12■■□□□ 1.77
TRAPPC9-215ENST00000524162 TRPM7Q96QT4 1865 aa26.12■■□□□ 1.77
TRAPPC9-215ENST00000524162 IL1R1P14778 569 aa26.11■■□□□ 1.77
TRAPPC9-215ENST00000524162 PTPN12Q05209 780 aaKnown RBP26.11■■□□□ 1.77
TRAPPC9-215ENST00000524162 DACT2Q5SW24 774 aa26.11■■□□□ 1.77
TRAPPC9-215ENST00000524162 ZNF804AQ7Z570 1209 aa26.11■■□□□ 1.77
TRAPPC9-215ENST00000524162 VGLL2Q8N8G2 317 aa26.11■■□□□ 1.77
TRAPPC9-215ENST00000524162 CD209Q9NNX6 404 aa26.11■■□□□ 1.77
TRAPPC9-215ENST00000524162 LRRFIP2Q9Y608 721 aaKnown RBP26.11■■□□□ 1.77
TRAPPC9-215ENST00000524162 POLR2AP24928 1970 aaKnown RBP26.1■■□□□ 1.77
TRAPPC9-215ENST00000524162 CIAO1O76071 339 aa26.1■■□□□ 1.77
TRAPPC9-215ENST00000524162 KLRK1P26718 216 aa26.1■■□□□ 1.77
TRAPPC9-215ENST00000524162 DNAJC5GQ8N7S2 189 aa26.1■■□□□ 1.77
TRAPPC9-215ENST00000524162 EYA2O00167 538 aa26.09■■□□□ 1.77
TRAPPC9-215ENST00000524162 PDE8BO95263 885 aa26.09■■□□□ 1.77
TRAPPC9-215ENST00000524162 CREBZFQ9NS37 354 aa26.09■■□□□ 1.77
TRAPPC9-215ENST00000524162 HIRAP54198 1017 aaPredicted RBP26.08■■□□□ 1.77
TRAPPC9-215ENST00000524162 FKBP1AP62942 108 aaKnown RBP26.08■■□□□ 1.77
TRAPPC9-215ENST00000524162 LRRC24Q50LG9 513 aa26.08■■□□□ 1.77
TRAPPC9-215ENST00000524162 MAP1SQ66K74 1059 aaPredicted RBP26.08■■□□□ 1.77
TRAPPC9-215ENST00000524162 DZIP1LQ8IYY4 767 aaKnown RBP26.08■■□□□ 1.77
TRAPPC9-215ENST00000524162 COPRSQ9NQ92 184 aa26.08■■□□□ 1.77
TRAPPC9-215ENST00000524162 SNAP23O00161 211 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 USP17L8P0C7I0 530 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 MS4A1P11836 297 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 METTL24Q5JXM2 366 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 TTLL5Q6EMB2 1281 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 TMEM57Q8N5G2 664 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 TRPM4Q8TD43 1214 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
TRAPPC9-215ENST00000524162 GNAI2P04899 355 aa26.06■■□□□ 1.76
TRAPPC9-215ENST00000524162 FTSJ3Q8IY81 847 aaKnown RBP26.06■■□□□ 1.76
TRAPPC9-215ENST00000524162 TNNQ9UQP3 1299 aa26.06■■□□□ 1.76
TRAPPC9-215ENST00000524162 PLIN1O60240 522 aa26.05■■□□□ 1.76
TRAPPC9-215ENST00000524162 SHTN1A0MZ66 631 aa26.04■■□□□ 1.76
TRAPPC9-215ENST00000524162 SASH1O94885 1247 aa26.04■■□□□ 1.76
TRAPPC9-215ENST00000524162 PUM3Q15397 648 aaKnown RBP26.04■■□□□ 1.76
TRAPPC9-215ENST00000524162 ATG9AQ7Z3C6 839 aa26.04■■□□□ 1.76
TRAPPC9-215ENST00000524162 SAMD7Q7Z3H4 446 aa26.04■■□□□ 1.76
TRAPPC9-215ENST00000524162 KLHDC4Q8TBB5 520 aa26.04■■□□□ 1.76
TRAPPC9-215ENST00000524162 FAM84BQ96KN1 310 aaPredicted RBP26.04■■□□□ 1.76
TRAPPC9-215ENST00000524162 TMEM88BA6NKF7 163 aa26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 FGFR2P21802 821 aa26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 HIBADHP31937 336 aaKnown RBP26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 KIF4BQ2VIQ3 1234 aa26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 CDC37L1Q7L3B6 337 aa26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 OGFOD1Q8N543 542 aa26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 TDRD7Q8NHU6 1098 aaKnown RBP26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 FAM205AQ6ZU69 1335 aa26.03■■□□□ 1.76
TRAPPC9-215ENST00000524162 ZBTB22O15209 634 aa26.02■■□□□ 1.76
TRAPPC9-215ENST00000524162 IL15P40933 162 aaPredicted RBP26.02■■□□□ 1.76
TRAPPC9-215ENST00000524162 GTF2IP78347 998 aa26.02■■□□□ 1.76
TRAPPC9-215ENST00000524162 FBXO33Q7Z6M2 555 aa26.02■■□□□ 1.76
TRAPPC9-215ENST00000524162 KLRG1Q96E93 195 aa26.02■■□□□ 1.76
TRAPPC9-215ENST00000524162 PCNTO95613 3336 aa26.01■■□□□ 1.75
TRAPPC9-215ENST00000524162 TBC1D10BQ4KMP7 808 aaPredicted RBP26.01■■□□□ 1.75
TRAPPC9-215ENST00000524162 MYOZ2Q9NPC6 264 aa26.01■■□□□ 1.75
TRAPPC9-215ENST00000524162 RCAN3Q9UKA8 241 aa26.01■■□□□ 1.75
TRAPPC9-215ENST00000524162 ARAP2Q8WZ64 1704 aa26■■□□□ 1.75
TRAPPC9-215ENST00000524162 PITPNM2Q9BZ72 1349 aa26■■□□□ 1.75
TRAPPC9-215ENST00000524162 ZBTB7BO15156 539 aaPredicted RBP26■■□□□ 1.75
TRAPPC9-215ENST00000524162 SRGAP3O43295 1099 aa26■■□□□ 1.75
TRAPPC9-215ENST00000524162 EGFRP00533 1210 aa26■■□□□ 1.75
TRAPPC9-215ENST00000524162 IFIT1P09914 478 aaKnown RBP26■■□□□ 1.75
TRAPPC9-215ENST00000524162 CAVIN4Q5BKX8 364 aa26■■□□□ 1.75
TRAPPC9-215ENST00000524162 LPIN2Q92539 896 aa26■■□□□ 1.75
TRAPPC9-215ENST00000524162 RLBP1P12271 317 aa25.99■■□□□ 1.75
TRAPPC9-215ENST00000524162 CEP126Q9P2H0 1117 aa25.99■■□□□ 1.75
TRAPPC9-215ENST00000524162 HDAC9Q9UKV0 1011 aa25.98■■□□□ 1.75
TRAPPC9-215ENST00000524162 MYH13Q9UKX3 1938 aa25.98■■□□□ 1.75
TRAPPC9-215ENST00000524162 GYG1P46976 350 aa25.97■■□□□ 1.75
TRAPPC9-215ENST00000524162 JMYQ8N9B5 988 aa25.97■■□□□ 1.75
TRAPPC9-215ENST00000524162 MTMR14Q8NCE2 650 aa25.97■■□□□ 1.75
TRAPPC9-215ENST00000524162 DCPSQ96C86 337 aaKnown RBP25.97■■□□□ 1.75
TRAPPC9-215ENST00000524162 ECM29Q5VYK3 1845 aa25.97■■□□□ 1.75
TRAPPC9-215ENST00000524162 SLC5A1P13866 664 aa25.96■■□□□ 1.75
TRAPPC9-215ENST00000524162 HTRA3P83110 453 aa25.96■■□□□ 1.75
TRAPPC9-215ENST00000524162 VPS37DQ86XT2 251 aa25.96■■□□□ 1.75
TRAPPC9-215ENST00000524162 ITPRIPQ8IWB1 547 aa25.96■■□□□ 1.75
TRAPPC9-215ENST00000524162 CERS5Q8N5B7 392 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms