RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 MYH16Q9H6N6 1097 aa24■■□□□ 1.43
PTP4A3-206ENST00000524028 GBA2Q9HCG7 927 aaPredicted RBP24■■□□□ 1.43
PTP4A3-206ENST00000524028 USP17L8P0C7I0 530 aa23.99■■□□□ 1.43
PTP4A3-206ENST00000524028 IGHMBP2P38935 993 aaKnown RBP23.99■■□□□ 1.43
PTP4A3-206ENST00000524028 MXD3Q9BW11 206 aa23.99■■□□□ 1.43
PTP4A3-206ENST00000524028 MYOZ2Q9NPC6 264 aa23.99■■□□□ 1.43
PTP4A3-206ENST00000524028 F6X3S4 739 aa23.98■■□□□ 1.43
PTP4A3-206ENST00000524028 BRPF1P55201 1214 aaPredicted RBP23.98■■□□□ 1.43
PTP4A3-206ENST00000524028 ANGEL2Q5VTE6 544 aaKnown RBP23.98■■□□□ 1.43
PTP4A3-206ENST00000524028 SULF1Q8IWU6 871 aa23.98■■□□□ 1.43
PTP4A3-206ENST00000524028 FAM155AB1AL88 458 aaPredicted RBP23.97■■□□□ 1.43
PTP4A3-206ENST00000524028 MYH3P11055 1940 aa23.97■■□□□ 1.43
PTP4A3-206ENST00000524028 KLRK1P26718 216 aa23.97■■□□□ 1.43
PTP4A3-206ENST00000524028 DACT2Q5SW24 774 aa23.97■■□□□ 1.43
PTP4A3-206ENST00000524028 C2orf69Q8N8R5 385 aa23.97■■□□□ 1.43
PTP4A3-206ENST00000524028 LEMD3Q9Y2U8 911 aa23.97■■□□□ 1.43
PTP4A3-206ENST00000524028 NOGQ13253 232 aa23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 BEND3Q5T5X7 828 aa23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 RGMBQ6NW40 437 aa23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 CDCA5Q96FF9 252 aa23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 COA1Q9GZY4 146 aa23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 POLR2AP24928 1970 aaKnown RBP23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 SPEF2Q9C093 1822 aa23.96■■□□□ 1.43
PTP4A3-206ENST00000524028 ZNF804BA4D1E1 1349 aa23.95■■□□□ 1.42
PTP4A3-206ENST00000524028 FOXO4P98177 505 aa23.95■■□□□ 1.42
PTP4A3-206ENST00000524028 MPHOSPH8Q99549 860 aa23.95■■□□□ 1.42
PTP4A3-206ENST00000524028 SCAF8Q9UPN6 1271 aaKnown RBP23.95■■□□□ 1.42
PTP4A3-206ENST00000524028 PSME4Q14997 1843 aa23.95■■□□□ 1.42
PTP4A3-206ENST00000524028 ANKRD2Q9GZV1 360 aa23.94■■□□□ 1.42
PTP4A3-206ENST00000524028 CA12O43570 354 aa23.93■■□□□ 1.42
PTP4A3-206ENST00000524028 CHRNDQ07001 517 aa23.93■■□□□ 1.42
PTP4A3-206ENST00000524028 STRIP1Q5VSL9 837 aa23.93■■□□□ 1.42
PTP4A3-206ENST00000524028 FBXW7Q969H0 707 aa23.93■■□□□ 1.42
PTP4A3-206ENST00000524028 ABHD8Q96I13 439 aa23.93■■□□□ 1.42
PTP4A3-206ENST00000524028 ANKRD18BA2A2Z9 1011 aa23.92■■□□□ 1.42
PTP4A3-206ENST00000524028 SNAP23O00161 211 aa23.92■■□□□ 1.42
PTP4A3-206ENST00000524028 NBPF9Q3BBW0 867 aa23.92■■□□□ 1.42
PTP4A3-206ENST00000524028 ZNF157P51786 506 aaPredicted RBP23.91■■□□□ 1.42
PTP4A3-206ENST00000524028 EPHA10Q5JZY3 1008 aa23.91■■□□□ 1.42
PTP4A3-206ENST00000524028 CCDC102AQ96A19 550 aa23.91■■□□□ 1.42
PTP4A3-206ENST00000524028 PITPNM2Q9BZ72 1349 aa23.9■■□□□ 1.42
PTP4A3-206ENST00000524028 IRS2Q9Y4H2 1338 aa23.9■■□□□ 1.42
PTP4A3-206ENST00000524028 KIF23Q02241 960 aaPredicted RBP23.9■■□□□ 1.42
PTP4A3-206ENST00000524028 ZNF646O15015 1829 aaPredicted RBP23.89■■□□□ 1.42
PTP4A3-206ENST00000524028 TAF5LO75529 589 aa23.89■■□□□ 1.41
PTP4A3-206ENST00000524028 TTLL5Q6EMB2 1281 aa23.89■■□□□ 1.41
PTP4A3-206ENST00000524028 HELBQ8NG08 1087 aaPredicted RBP23.89■■□□□ 1.41
PTP4A3-206ENST00000524028 MYO3BQ8WXR4 1341 aa23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 WNT10BO00744 389 aa23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 SLC10A3P09131 477 aa23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 KCNJ4P48050 445 aa23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 IFIT5Q13325 482 aaKnown RBP23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 PRAMEF18Q5VWM3 479 aa23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 LMBR1LQ6UX01 489 aa23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 OGFOD1Q8N543 542 aa23.88■■□□□ 1.41
PTP4A3-206ENST00000524028 ZNF521Q96K83 1311 aa23.87■■□□□ 1.41
PTP4A3-206ENST00000524028 CACNA1FO60840 1977 aa23.87■■□□□ 1.41
PTP4A3-206ENST00000524028 GTF2IP78347 998 aa23.87■■□□□ 1.41
PTP4A3-206ENST00000524028 MOB2Q70IA6 237 aa23.87■■□□□ 1.41
PTP4A3-206ENST00000524028 CD209Q9NNX6 404 aa23.87■■□□□ 1.41
PTP4A3-206ENST00000524028 CHMP3Q9Y3E7 222 aa23.87■■□□□ 1.41
PTP4A3-206ENST00000524028 GRM8O00222 908 aa23.86■■□□□ 1.41
PTP4A3-206ENST00000524028 KIAA0825Q8IV33 1275 aa23.86■■□□□ 1.41
PTP4A3-206ENST00000524028 ZNF594Q96JF6 807 aaPredicted RBP23.86■■□□□ 1.41
PTP4A3-206ENST00000524028 SASH1O94885 1247 aa23.85■■□□□ 1.41
PTP4A3-206ENST00000524028 C15orf52Q6ZUT6 534 aaKnown RBP23.85■■□□□ 1.41
PTP4A3-206ENST00000524028 FKBP1BP68106 108 aa23.84■■□□□ 1.41
PTP4A3-206ENST00000524028 SLC4A10Q6U841 1118 aa23.84■■□□□ 1.41
PTP4A3-206ENST00000524028 RASAL3Q86YV0 1011 aa23.84■■□□□ 1.41
PTP4A3-206ENST00000524028 CSRNP1Q96S65 589 aa23.84■■□□□ 1.41
PTP4A3-206ENST00000524028 CERS5Q8N5B7 392 aa23.83■■□□□ 1.41
PTP4A3-206ENST00000524028 ZBED3Q96IU2 234 aaPredicted RBP23.83■■□□□ 1.41
PTP4A3-206ENST00000524028 RNF186Q9NXI6 227 aa23.83■■□□□ 1.41
PTP4A3-206ENST00000524028 UBE2Q2LH0YL09 131 aa23.82■■□□□ 1.4
PTP4A3-206ENST00000524028 ALDH1L1O75891 902 aa23.82■■□□□ 1.4
PTP4A3-206ENST00000524028 MMP14P50281 582 aa23.82■■□□□ 1.4
PTP4A3-206ENST00000524028 MCOLN1Q9GZU1 580 aa23.82■■□□□ 1.4
PTP4A3-206ENST00000524028 SAGE1Q9NXZ1 904 aa23.82■■□□□ 1.4
PTP4A3-206ENST00000524028 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
PTP4A3-206ENST00000524028 CCDC57Q2TAC2 916 aa23.81■■□□□ 1.4
PTP4A3-206ENST00000524028 LDHAL6AQ6ZMR3 332 aa23.81■■□□□ 1.4
PTP4A3-206ENST00000524028 KAZALD1Q96I82 304 aa23.81■■□□□ 1.4
PTP4A3-206ENST00000524028 SRCIN1Q9C0H9 1055 aa23.81■■□□□ 1.4
PTP4A3-206ENST00000524028 PAPPA2Q9BXP8 1791 aa23.8■■□□□ 1.4
PTP4A3-206ENST00000524028 PLIN1O60240 522 aa23.8■■□□□ 1.4
PTP4A3-206ENST00000524028 TRPA1O75762 1119 aa23.8■■□□□ 1.4
PTP4A3-206ENST00000524028 IL1R1P14778 569 aa23.8■■□□□ 1.4
PTP4A3-206ENST00000524028 SUCLG2Q96I99 432 aa23.8■■□□□ 1.4
PTP4A3-206ENST00000524028 HDAC9Q9UKV0 1011 aa23.8■■□□□ 1.4
PTP4A3-206ENST00000524028 CCDC85CA6NKD9 419 aa23.79■■□□□ 1.4
PTP4A3-206ENST00000524028 NBPF7P0C2Y1 421 aaPredicted RBP23.79■■□□□ 1.4
PTP4A3-206ENST00000524028 PCDHAC2Q9Y5I4 1007 aa23.79■■□□□ 1.4
PTP4A3-206ENST00000524028 CASP8AP2Q9UKL3 1982 aa23.78■■□□□ 1.4
PTP4A3-206ENST00000524028 TAF7LQ5H9L4 462 aa23.78■■□□□ 1.4
PTP4A3-206ENST00000524028 ZNF804AQ7Z570 1209 aa23.78■■□□□ 1.4
PTP4A3-206ENST00000524028 MRPL50Q8N5N7 158 aaKnown RBP23.78■■□□□ 1.4
PTP4A3-206ENST00000524028 CNNM1Q9NRU3 951 aa23.78■■□□□ 1.4
PTP4A3-206ENST00000524028 DGKZQ13574 1117 aa23.77■■□□□ 1.4
PTP4A3-206ENST00000524028 PUS3Q9BZE2 481 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms