RNA–Protein interactions for RNA: ENST00000523991.5

MDM2-222, Transcript of MDM2 proto-oncogene, human

TSL 1 (best)

Gene MDM2, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-222	ENST00000523991	PTPN12	Q05209	780 aa	Known RBP	11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	AIMP1	Q12904	312 aa	Known RBP	11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	PDIA6	Q15084	440 aa		11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	OTUD7B	Q6GQQ9	843 aa		11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	COPS6	Q7L5N1	327 aa		11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	NBPF11	Q86T75	865 aa		11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	IFNL1	Q8IU54	200 aa		11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	OGFOD1	Q8N543	542 aa		11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	PODXL2	Q9NZ53	605 aa		11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	SCAF8	Q9UPN6	1271 aa	Known RBP	11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.33	□□□□□ -0.6
MDM2-222	ENST00000523991	USP17L3	A6NCW0	530 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	USP17L4	A6NCW7	530 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991		H0YGN5	161 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	ANXA1	P04083	346 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	RPS8	P62241	208 aa	Known RBP	11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	PRKG1	Q13976	671 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	ARHGEF6	Q15052	776 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	PROSER3	Q2NL68	480 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	SLC4A8	Q2Y0W8	1093 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	USP17L1	Q7RTZ2	530 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	CD99L2	Q8TCZ2	262 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	XAGE3	Q8WTP9	111 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	GML	Q99445	158 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	TSPYL4	Q9UJ04	414 aa		11.32	□□□□□ -0.6
MDM2-222	ENST00000523991	POLR2A	P24928	1970 aa	Known RBP	11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	ZBTB48	P10074	688 aa	Predicted RBP	11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	NBPF9	Q3BBW0	867 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	CHRDL2	Q6WN34	429 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	PODN	Q7Z5L7	613 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	SLC10A4	Q96EP9	437 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	OTUD5	Q96G74	571 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	ZNF333	Q96JL9	665 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	TAOK2	Q9UL54	1235 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	ANGEL1	Q9UNK9	670 aa	Known RBP	11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	MYO3B	Q8WXR4	1341 aa		11.31	□□□□□ -0.6
MDM2-222	ENST00000523991	PRKAR2A	P13861	404 aa	Known RBP	11.3	□□□□□ -0.6
MDM2-222	ENST00000523991	HSP90B1	P14625	803 aa	Known RBP	11.3	□□□□□ -0.6
MDM2-222	ENST00000523991	MMP14	P50281	582 aa		11.3	□□□□□ -0.6
MDM2-222	ENST00000523991	SP3	Q02447	781 aa		11.3	□□□□□ -0.6
MDM2-222	ENST00000523991	SLC9C1	Q4G0N8	1177 aa		11.3	□□□□□ -0.6
MDM2-222	ENST00000523991	LDLRAD1	Q5T700	205 aa		11.3	□□□□□ -0.6
MDM2-222	ENST00000523991	FAM89A	Q96GI7	184 aa		11.3	□□□□□ -0.6
MDM2-222	ENST00000523991	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
MDM2-222	ENST00000523991	WNT10B	O00744	389 aa		11.29	□□□□□ -0.6
MDM2-222	ENST00000523991	ZNF428	Q96B54	188 aa		11.29	□□□□□ -0.6
MDM2-222	ENST00000523991	COL1A1	P02452	1464 aa	Predicted RBP	11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	IRS4	O14654	1257 aa	Predicted RBP	11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	ATP2B4	P23634	1241 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	CRHR2	Q13324	411 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	NFE2L2	Q16236	605 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	PLBD2	Q8NHP8	589 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	FBXW7	Q969H0	707 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	WNK4	Q96J92	1243 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	RBM27	Q9P2N5	1060 aa	Known RBP	11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	XDH	P47989	1333 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	MAPK8IP3	Q9UPT6	1336 aa		11.28	□□□□□ -0.6
MDM2-222	ENST00000523991	UNCX	A6NJT0	531 aa		11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	PPP1R12B	O60237	982 aa	Predicted RBP	11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	SASH1	O94885	1247 aa		11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	PPP2R1A	P30153	589 aa		11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	RTL5	Q5HYW3	569 aa	Predicted RBP	11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	DPF3	Q92784	378 aa		11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	ISCA1	Q9BUE6	129 aa		11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	PNN	Q9H307	717 aa	Known RBP	11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	SCN9A	Q15858	1988 aa		11.27	□□□□□ -0.61
MDM2-222	ENST00000523991	TAF1	P21675	1872 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	ATP5J2-PTCD1	G3V325	749 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	MAP3K11	Q16584	847 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	CCDC152	Q4G0S7	254 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	ANKRD13D	Q6ZTN6	518 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	SPRYD3	Q8NCJ5	442 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	BABAM1	Q9NWV8	329 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	PTCH2	Q9Y6C5	1203 aa		11.26	□□□□□ -0.61
MDM2-222	ENST00000523991	PYGB	P11216	843 aa		11.25	□□□□□ -0.61
MDM2-222	ENST00000523991	DACT2	Q5SW24	774 aa		11.25	□□□□□ -0.61
MDM2-222	ENST00000523991	STRIP1	Q5VSL9	837 aa		11.25	□□□□□ -0.61
MDM2-222	ENST00000523991	ANKRD18A	Q8IVF6	992 aa		11.25	□□□□□ -0.61
MDM2-222	ENST00000523991	SEC31B	Q9NQW1	1179 aa		11.25	□□□□□ -0.61
MDM2-222	ENST00000523991	PPP2R3B	Q9Y5P8	575 aa		11.25	□□□□□ -0.61
MDM2-222	ENST00000523991	MED23	Q9ULK4	1368 aa		11.25	□□□□□ -0.61
MDM2-222	ENST00000523991	COL4A1	P02462	1669 aa		11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	WDHD1	O75717	1129 aa	Predicted RBP	11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	MYC	P01106	439 aa	Predicted RBP	11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	IREB2	P48200	963 aa	Known RBP	11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	SUPT20HL1	Q3ZLR7	823 aa		11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	CLMN	Q96JQ2	1002 aa		11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	HTATIP2	Q9BUP3	242 aa		11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	DEFB129	Q9H1M3	183 aa		11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	FZD1	Q9UP38	647 aa		11.24	□□□□□ -0.61
MDM2-222	ENST00000523991	TRIM28	Q13263	835 aa	Known RBP	11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	KIF22	Q14807	665 aa		11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	ANKRD13A	Q8IZ07	590 aa		11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	NKX2-3	Q8TAU0	364 aa		11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	PLEKHF1	Q96S99	279 aa		11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	MXD3	Q9BW11	206 aa		11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	COA1	Q9GZY4	146 aa		11.23	□□□□□ -0.61
MDM2-222	ENST00000523991	ZFYVE28	Q9HCC9	887 aa		11.23	□□□□□ -0.61

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