RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 BABAM1Q9NWV8 329 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 RIPK4P57078 832 aa12.13□□□□□ -0.47
PTPN12-216ENST00000523952 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
PTPN12-216ENST00000523952 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
PTPN12-216ENST00000523952 CHPF2Q9P2E5 772 aa12.13□□□□□ -0.47
PTPN12-216ENST00000523952 LAS1LQ9Y4W2 734 aaKnown RBP12.13□□□□□ -0.47
PTPN12-216ENST00000523952 NBPF9Q3BBW0 867 aa12.12□□□□□ -0.47
PTPN12-216ENST00000523952 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
PTPN12-216ENST00000523952 XDHP47989 1333 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 CEP290O15078 2479 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 OTOFQ9HC10 1997 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 POTEFA5A3E0 1075 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 PODNQ7Z5L7 613 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
PTPN12-216ENST00000523952 ERO1AQ96HE7 468 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 ISCA1Q9BUE6 129 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 CFHR5Q9BXR6 569 aa12.11□□□□□ -0.47
PTPN12-216ENST00000523952 ANGEL1Q9UNK9 670 aaKnown RBP12.11□□□□□ -0.47
PTPN12-216ENST00000523952 MANSC4A6NHS7 340 aaPredicted RBP12.1□□□□□ -0.47
PTPN12-216ENST00000523952 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
PTPN12-216ENST00000523952 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 INHBEP58166 350 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 PTPN12Q05209 780 aaKnown RBP12.1□□□□□ -0.47
PTPN12-216ENST00000523952 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 OTOP1Q7RTM1 612 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 SLC10A4Q96EP9 437 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 DBF4Q9UBU7 674 aaPredicted RBP12.1□□□□□ -0.47
PTPN12-216ENST00000523952 CENPFP49454 3210 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 MYO3BQ8WXR4 1341 aa12.1□□□□□ -0.47
PTPN12-216ENST00000523952 SASH1O94885 1247 aa12.09□□□□□ -0.47
PTPN12-216ENST00000523952 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPN12-216ENST00000523952 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
PTPN12-216ENST00000523952 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
PTPN12-216ENST00000523952 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
PTPN12-216ENST00000523952 GMLQ99445 158 aa12.09□□□□□ -0.47
PTPN12-216ENST00000523952 R3HDMLQ9H3Y0 253 aa12.09□□□□□ -0.47
PTPN12-216ENST00000523952 HYPKQ9NX55 129 aa12.09□□□□□ -0.47
PTPN12-216ENST00000523952 WNT10BO00744 389 aa12.08□□□□□ -0.48
PTPN12-216ENST00000523952 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
PTPN12-216ENST00000523952 IFNL1Q8IU54 200 aa12.08□□□□□ -0.48
PTPN12-216ENST00000523952 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
PTPN12-216ENST00000523952 COL1A1P02452 1464 aaPredicted RBP12.08□□□□□ -0.48
PTPN12-216ENST00000523952 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 MKI67P46013 3256 aaKnown RBP12.07□□□□□ -0.48
PTPN12-216ENST00000523952 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
PTPN12-216ENST00000523952 PDE8AO60658 829 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 EN2P19622 333 aaPredicted RBP12.07□□□□□ -0.48
PTPN12-216ENST00000523952 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 NBPF11Q86T75 865 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 CD99L2Q8TCZ2 262 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
PTPN12-216ENST00000523952 EFCC1Q9HA90 598 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 PTPN22Q9Y2R2 807 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
PTPN12-216ENST00000523952 MED23Q9ULK4 1368 aa12.06□□□□□ -0.48
PTPN12-216ENST00000523952 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
PTPN12-216ENST00000523952 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
PTPN12-216ENST00000523952 MMP14P50281 582 aa12.06□□□□□ -0.48
PTPN12-216ENST00000523952 TRIM28Q13263 835 aaKnown RBP12.06□□□□□ -0.48
PTPN12-216ENST00000523952 KRT24Q2M2I5 525 aa12.06□□□□□ -0.48
PTPN12-216ENST00000523952 SLC4A8Q2Y0W8 1093 aa12.06□□□□□ -0.48
PTPN12-216ENST00000523952 LHX8Q68G74 356 aa12.06□□□□□ -0.48
PTPN12-216ENST00000523952 MXD3Q9BW11 206 aa12.06□□□□□ -0.48
PTPN12-216ENST00000523952 HOXB7P09629 217 aa12.05□□□□□ -0.48
PTPN12-216ENST00000523952 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
PTPN12-216ENST00000523952 SLC9C1Q4G0N8 1177 aa12.05□□□□□ -0.48
PTPN12-216ENST00000523952 STRIP1Q5VSL9 837 aa12.05□□□□□ -0.48
PTPN12-216ENST00000523952 KIAA0825Q8IV33 1275 aa12.05□□□□□ -0.48
PTPN12-216ENST00000523952 WNK4Q96J92 1243 aa12.05□□□□□ -0.48
PTPN12-216ENST00000523952 MYD88Q99836 296 aa12.05□□□□□ -0.48
PTPN12-216ENST00000523952 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
PTPN12-216ENST00000523952 ZSWIM8A7E2V4 1837 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 HTTP42858 3142 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 MYO1BO43795 1136 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 PCCAP05165 728 aaPredicted RBP12.04□□□□□ -0.48
PTPN12-216ENST00000523952 SP3Q02447 781 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 CRHR2Q13324 411 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 DACT2Q5SW24 774 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 LDLRAD1Q5T700 205 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 TTLL5Q6EMB2 1281 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 CCDC191Q8NCU4 936 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 COA1Q9GZY4 146 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 CWC25Q9NXE8 425 aaPredicted RBP12.04□□□□□ -0.48
PTPN12-216ENST00000523952 FZD1Q9UP38 647 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 CACNA1FO60840 1977 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 MGAMO43451 1857 aa12.04□□□□□ -0.48
PTPN12-216ENST00000523952 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
PTPN12-216ENST00000523952 IGF2BP3O00425 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN12-216ENST00000523952 CHL1O00533 1208 aa12.03□□□□□ -0.48
PTPN12-216ENST00000523952 KCNJ4P48050 445 aa12.03□□□□□ -0.48
PTPN12-216ENST00000523952 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
PTPN12-216ENST00000523952 CCT4P50991 539 aaKnown RBP12.03□□□□□ -0.48
PTPN12-216ENST00000523952 DLGAP5Q15398 846 aa12.03□□□□□ -0.48
PTPN12-216ENST00000523952 SUPT20HL1Q3ZLR7 823 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms