RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 TAF1P21675 1872 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 USP17L8P0C7I0 530 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 CCT4P50991 539 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 TAF7LQ5H9L4 462 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 USP48Q86UV5 1035 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 REM2Q8IYK8 340 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 COA1Q9GZY4 146 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 KCNQ5Q9NR82 932 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 GGA3Q9NZ52 723 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
CTNNA1-240ENST00000523912 MMP14P50281 582 aa11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 HUNKP57058 714 aa11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 RGMBQ6NW40 437 aa11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 OGFOD1Q8N543 542 aa11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 C9orf78Q9NZ63 289 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 ZNF804BA4D1E1 1349 aa11.23□□□□□ -0.61
CTNNA1-240ENST00000523912 E9PSI1 815 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 F6X3S4 739 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 GRM8O00222 908 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 ALDH1L1O75891 902 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 CSF1RP07333 972 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 CASP7P55210 303 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 CCDC57Q2TAC2 916 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 BEND3Q5T5X7 828 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 STRIP1Q5VSL9 837 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 GBA2Q9HCG7 927 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 MYOZ2Q9NPC6 264 aa11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-240ENST00000523912 CASP8AP2Q9UKL3 1982 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 ADM5C9JUS6 153 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 EGFRP00533 1210 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 DGKZQ13574 1117 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 SCARF1Q14162 830 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 HDAC9Q9UKV0 1011 aa11.21□□□□□ -0.61
CTNNA1-240ENST00000523912 CACNA1FO60840 1977 aa11.21□□□□□ -0.62
CTNNA1-240ENST00000523912 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 MYH3P11055 1940 aa11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 FAM155AB1AL88 458 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 CHRNDQ07001 517 aa11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 DACT2Q5SW24 774 aa11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 ANGEL2Q5VTE6 544 aaKnown RBP11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 ZNF804AQ7Z570 1209 aa11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 GMLQ99445 158 aa11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 PDE4DIPQ5VU43 2346 aa11.2□□□□□ -0.62
CTNNA1-240ENST00000523912 PTPRCP08575 1304 aa11.19□□□□□ -0.62
CTNNA1-240ENST00000523912 NF2P35240 595 aa11.19□□□□□ -0.62
CTNNA1-240ENST00000523912 FKBP1BP68106 108 aa11.19□□□□□ -0.62
CTNNA1-240ENST00000523912 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
CTNNA1-240ENST00000523912 CDCA5Q96FF9 252 aa11.19□□□□□ -0.62
CTNNA1-240ENST00000523912 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
CTNNA1-240ENST00000523912 SCN9AQ15858 1988 aa11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 SLC10A3P09131 477 aa11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 ZNF157P51786 506 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 FOXO4P98177 505 aa11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 KIF23Q02241 960 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 LDHAL6AQ6ZMR3 332 aa11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 ZIC5Q96T25 663 aa11.18□□□□□ -0.62
CTNNA1-240ENST00000523912 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-240ENST00000523912 KLRK1P26718 216 aa11.17□□□□□ -0.62
CTNNA1-240ENST00000523912 GTF2IP78347 998 aa11.17□□□□□ -0.62
CTNNA1-240ENST00000523912 C15orf52Q6ZUT6 534 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-240ENST00000523912 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-240ENST00000523912 RNF186Q9NXI6 227 aa11.17□□□□□ -0.62
CTNNA1-240ENST00000523912 POLR2AP24928 1970 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-240ENST00000523912 WTIPA6NIX2 430 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 TAF5LO75529 589 aa11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 PKN2Q16513 984 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 TXNRD3Q86VQ6 643 aa11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 KIAA0825Q8IV33 1275 aa11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 MXD3Q9BW11 206 aa11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 CD209Q9NNX6 404 aa11.16□□□□□ -0.62
CTNNA1-240ENST00000523912 MROH5Q6ZUA9 1318 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 MYO1BO43795 1136 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 PLIN1O60240 522 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 SASH1O94885 1247 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 NBPF9Q3BBW0 867 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 NOM1Q5C9Z4 860 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 EPHA10Q5JZY3 1008 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 DLK2Q6UY11 383 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 CTU1Q7Z7A3 348 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 HELBQ8NG08 1087 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 CSRNP1Q96S65 589 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
CTNNA1-240ENST00000523912 PSME4Q14997 1843 aa11.14□□□□□ -0.63
CTNNA1-240ENST00000523912 SPEF2Q9C093 1822 aa11.14□□□□□ -0.63
CTNNA1-240ENST00000523912 UTYO14607 1347 aa11.14□□□□□ -0.63
CTNNA1-240ENST00000523912 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms