RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 FAM129BQ96TA1 746 aa6.69□□□□□ -1.34
PCM1-220ENST00000523896 PDE3BQ13370 1112 aa6.68□□□□□ -1.34
PCM1-220ENST00000523896 RSPO4Q2I0M5 234 aaPredicted RBP6.68□□□□□ -1.34
PCM1-220ENST00000523896 PDE12Q6L8Q7 609 aaKnown RBP6.68□□□□□ -1.34
PCM1-220ENST00000523896 IGF2-ASQ6U949 168 aa6.68□□□□□ -1.34
PCM1-220ENST00000523896 TMC7Q7Z402 723 aa6.68□□□□□ -1.34
PCM1-220ENST00000523896 NCAPG2Q86XI2 1143 aa6.68□□□□□ -1.34
PCM1-220ENST00000523896 IGHA2P01877 340 aa6.67□□□□□ -1.34
PCM1-220ENST00000523896 C8orf34Q49A92 452 aa6.67□□□□□ -1.34
PCM1-220ENST00000523896 CEP135Q66GS9 1140 aa6.67□□□□□ -1.34
PCM1-220ENST00000523896 FAM117BQ6P1L5 589 aa6.67□□□□□ -1.34
PCM1-220ENST00000523896 TP53INP1Q96A56 240 aa6.67□□□□□ -1.34
PCM1-220ENST00000523896 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
PCM1-220ENST00000523896 ANKRD33BA6NCL7 494 aa6.66□□□□□ -1.34
PCM1-220ENST00000523896 DYRK3O43781 588 aa6.66□□□□□ -1.34
PCM1-220ENST00000523896 EHHADHQ08426 723 aa6.66□□□□□ -1.34
PCM1-220ENST00000523896 NPAS4Q8IUM7 802 aa6.66□□□□□ -1.34
PCM1-220ENST00000523896 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
PCM1-220ENST00000523896 ELP3Q9H9T3 547 aa6.66□□□□□ -1.34
PCM1-220ENST00000523896 TRIM33Q9UPN9 1127 aa6.66□□□□□ -1.34
PCM1-220ENST00000523896 PPME1Q9Y570 386 aa6.66□□□□□ -1.34
PCM1-220ENST00000523896 GPR182O15218 404 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 TREHO43280 583 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 H2AFB1P0C5Y9 115 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 H2AFB2P0C5Z0 115 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 COL19A1Q14993 1142 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 NKAPLQ5M9Q1 402 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 ZMYM1Q5SVZ6 1142 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 WFDC12Q8WWY7 111 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 ALKBH8Q96BT7 664 aaKnown RBP6.65□□□□□ -1.34
PCM1-220ENST00000523896 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.34
PCM1-220ENST00000523896 SCO2A0A1W2PP80 73 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 PTPRAP18433 802 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 CDC27P30260 824 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 IREB2P48200 963 aaKnown RBP6.64□□□□□ -1.35
PCM1-220ENST00000523896 CABP4P57796 275 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 XP32Q5T750 250 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 XKR5Q6UX68 686 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 TMC1Q8TDI8 760 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 PMEPA1Q969W9 287 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 GGNBP2Q9H3C7 697 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 AMOTL2Q9Y2J4 779 aa6.64□□□□□ -1.35
PCM1-220ENST00000523896 DEAF1O75398 565 aaPredicted RBP6.63□□□□□ -1.35
PCM1-220ENST00000523896 CES1P23141 567 aa6.63□□□□□ -1.35
PCM1-220ENST00000523896 ATP11AP98196 1134 aa6.63□□□□□ -1.35
PCM1-220ENST00000523896 FMR1Q06787 632 aaKnown RBP eCLIP6.63□□□□□ -1.35
PCM1-220ENST00000523896 DSC3Q14574 896 aa6.63□□□□□ -1.35
PCM1-220ENST00000523896 ILDR2Q71H61 639 aa6.63□□□□□ -1.35
PCM1-220ENST00000523896 AKTIPQ9H8T0 292 aa6.63□□□□□ -1.35
PCM1-220ENST00000523896 DLL1O00548 723 aa6.62□□□□□ -1.35
PCM1-220ENST00000523896 KIF4AO95239 1232 aa6.62□□□□□ -1.35
PCM1-220ENST00000523896 PBX4Q9BYU1 374 aa6.62□□□□□ -1.35
PCM1-220ENST00000523896 RASSF4Q9H2L5 321 aa6.62□□□□□ -1.35
PCM1-220ENST00000523896 TMEM63CQ9P1W3 806 aa6.62□□□□□ -1.35
PCM1-220ENST00000523896 KANSL3Q9P2N6 904 aa6.62□□□□□ -1.35
PCM1-220ENST00000523896 A6NHS1 94 aa6.61□□□□□ -1.35
PCM1-220ENST00000523896 LINC01387J3KSC0 135 aa6.61□□□□□ -1.35
PCM1-220ENST00000523896 CYP2E1P05181 493 aaPredicted RBP6.61□□□□□ -1.35
PCM1-220ENST00000523896 NOS3P29474 1203 aa6.61□□□□□ -1.35
PCM1-220ENST00000523896 CDC25BP30305 580 aa6.61□□□□□ -1.35
PCM1-220ENST00000523896 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
PCM1-220ENST00000523896 COL13A1Q5TAT6 717 aaPredicted RBP6.61□□□□□ -1.35
PCM1-220ENST00000523896 FOXD4L4Q8WXT5 416 aaPredicted RBP6.61□□□□□ -1.35
PCM1-220ENST00000523896 PHACTR2O75167 634 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 P4HBP07237 508 aaKnown RBP6.6□□□□□ -1.35
PCM1-220ENST00000523896 GLB1P16278 677 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 PLCB3Q01970 1234 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 SETDB1Q15047 1291 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 FBXO33Q7Z6M2 555 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 Q8N3U1 123 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 SNX29Q8TEQ0 813 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 NIF3L1Q9GZT8 377 aa6.6□□□□□ -1.35
PCM1-220ENST00000523896 TNFRSF21O75509 655 aa6.59□□□□□ -1.35
PCM1-220ENST00000523896 NEFLP07196 543 aa6.59□□□□□ -1.35
PCM1-220ENST00000523896 CD68P34810 354 aaPredicted RBP6.59□□□□□ -1.35
PCM1-220ENST00000523896 TMEM130Q8N3G9 435 aa6.59□□□□□ -1.35
PCM1-220ENST00000523896 CEP120Q8N960 986 aa6.59□□□□□ -1.35
PCM1-220ENST00000523896 C1orf127Q8N9H9 656 aa6.59□□□□□ -1.35
PCM1-220ENST00000523896 KLHL23Q8NBE8 558 aa6.59□□□□□ -1.35
PCM1-220ENST00000523896 BCL2L13Q9BXK5 485 aa6.59□□□□□ -1.35
PCM1-220ENST00000523896 RBM47A0AV96 593 aaKnown RBP6.58□□□□□ -1.36
PCM1-220ENST00000523896 F8W735 103 aaPredicted RBP6.58□□□□□ -1.36
PCM1-220ENST00000523896 EDN3P14138 238 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 ARL4DP49703 201 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 ENOX2Q16206 610 aaKnown RBP6.58□□□□□ -1.36
PCM1-220ENST00000523896 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
PCM1-220ENST00000523896 TXNDC11Q6PKC3 985 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 ACAD11Q709F0 780 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 MEGF10Q96KG7 1140 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 CEP41Q9BYV8 373 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 DNAJC25Q9H1X3 360 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 SEC31BQ9NQW1 1179 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 CNTN3Q9P232 1028 aa6.58□□□□□ -1.36
PCM1-220ENST00000523896 H3BRJ5 948 aa6.57□□□□□ -1.36
PCM1-220ENST00000523896 PDE2AO00408 941 aaPredicted RBP6.57□□□□□ -1.36
PCM1-220ENST00000523896 FSCN2O14926 492 aa6.57□□□□□ -1.36
PCM1-220ENST00000523896 MAPK8P45983 427 aa6.57□□□□□ -1.36
PCM1-220ENST00000523896 ORC1Q13415 861 aa6.57□□□□□ -1.36
PCM1-220ENST00000523896 CSRNP1Q96S65 589 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms